Dermatophagoides farinae (American house dust mite): 124493530
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Entry
124493530 CDS
T08043
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr04120
Ubiquitin mediated proteolysis
dfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124493530
04120 Ubiquitin mediated proteolysis
124493530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dfr04121
]
124493530
Enzymes [BR:
dfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124493530
Ubiquitin system [BR:
dfr04121
]
Ubiquitin ligases (E3)
U-box type E3
124493530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
124493530
NCBI-ProteinID:
XP_046912578
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MDQSNDQSPSPSNVPGNSSGENDNPIINSEISSSSTSSHLANTIIPEIYVPQTSRELTPE
ELRRKRLSRLAGAGAYHNNNNNPAGQQQQQQQRHQVQSSINVAASSTIMTTSANLLPQLA
ESSLLQQQQPLNCNSSTKTTANNNKKRNDTLNHHLHQQQGVNNPANTEQGNESSLKYNVN
LDFVSDKRSSSYPEPPSAMDVDCTPHNDKMNPNIGGSDARIEKMDVDNIEERRENLKRQR
DNSFESKSDIVLDSFEESNSLSLTIFNIISKTFNVEISNENNGNNDQLIHSPVTINLQEF
KTKIKPTDDYKNIIQFILMEIVTNLINQPVSFDDSLAYFNKFKPENFESIIQSTFKIKKN
NDFEAVNFMSYRNKYILALSYVLDSFNRANKEEKLTLEKYETPIIRDLLASIKNQCINFV
ALIMNQSESDSYLINYFLQLLYSQKLHPDFINSFIVNTYNHYSPTLFAAIFEPILQNLWL
DMNSYCSFIYDNHKLPLQILNQICNVSVGKSNYPIGELLTNSQTINWLLPATISESNGRE
FSKIAYMSPFLRLSVFAEDDPKIVDKYYPSKNGHDVVKQTTIDLQNTLDYIRRDLLYPIF
HSLLLNHKSRARTVEFFTEALLRNSTRSRLHLDEKSVASDGFFTNLTSVLQLLSVKIKRE
KIDPLFPMNQNNPLAIKKDDSRIKFNQAEAEKWLEQEMAKPDFAWNEVTFSTQCFFQTLY
AHHISVIPCIRKHMRRLRTIRELNRFIEAHQTDQSNRLRRYKEQMLRYHKSKLCAEAGLL
DERFLGRCMIFYNQFIHFLLKLINCDNEYDLELPLPQNVPPIFASYPDWYLEDLADFLIF
IIQHCSTILEPPNPYYDSANFECLILFIIVVICSPHYINNPYLTAKFIEIVFLSSPIVNT
HSSTFHAKIMNHPLADQYLVRALMKFYTDVEITGTSNEFYDKFTIRYHISIIFKSFWTNQ
KQQFAIINEADNGKNFVKFINMLMNDTTFLLDEALVSLKRIHEIKEDMKNPENWNRQTRE
QRETRERQLAFDERQCRSFLILAVENVDMLHYLTKTVQKPFEAVELIDRLAAMLNFNLQQ
LCGKKCKSLKVPNPEKYGWDPKYLLDKITDIYLHLKSKKFYQAIANDERSYSHELFKDAA
SKMERIHIKSQHKIESFLLIISEVEKILEVKKQMEIDFSDAPENYKDPLMDTIMDDPVIL
PSGNIMDRSVIIRHLLNASTDPFNRQPLNEDMLVPNDKLRQEIKEWKQQKIRNAKHEKKN
AETDTDETEEQ
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcaaatgatcagtcgccatcaccatcaaatgttcctgggaattcttcgggt
gaaaatgataatccaataatcaattcggaaatatcatcatcatccacttcatctcatttg
gcaaataccatcataccagaaatttatgttccacaaacatctcgagaattgactcctgaa
gagttacgacgcaaacgactctcaagattggctggtgctggagcataccataataataac
aataaccctgccggacaacaacaacaacaacaacaacgacatcaagttcaatcatctatt
aatgtagcggcatcatcaacaataatgacaacatctgccaatttgttgccgcagcttgcc
gaatcaagtcttcttcaacagcaacagccattgaattgtaattcatcaaccaagacgacg
gcaaataataataaaaaaagaaacgacaccctcaatcatcacctacatcaacagcaagga
gtgaataacccggctaacactgaacaaggaaatgaatcatcactcaaatataatgttaat
ttagattttgtttcggataaacgatcatcatcatatccagaaccaccatcagcaatggat
gttgattgtactcctcacaatgataaaatgaatccaaatattggcggttcagatgctcgt
atcgagaagatggatgtagataatattgaagaacgtcgtgaaaatcttaaacgacaacga
gataattcattcgagtcaaaatctgatattgttcttgattcatttgaagaatcaaattca
ttatcgttgacaattttcaatataatatcgaaaacatttaatgttgaaatttccaatgaa
aataatggcaacaatgaccaattgattcattcaccagtcacaataaatcttcaagaattt
aaaactaaaatcaaaccaaccgatgattacaagaatattattcaattcattctcatggaa
attgtaacgaatctcattaatcaaccggtcagttttgatgatagtctcgcttatttcaat
aaattcaaaccagaaaattttgaatcaatcattcaatcaacattcaaaatcaaaaagaac
aatgattttgaagccgtgaattttatgtcatatcgtaataaatatattttagccctatca
tatgtgctggattcattcaatcgagccaacaaagaagaaaaattaacattggaaaaatat
gaaacaccaatcattcgcgatttattggcatcgattaaaaatcaatgcatcaattttgtt
gcattgatcatgaatcaatcggaatcggattcatatcttataaattatttcctgcaatta
ttgtattcacaaaaattacatccagattttatcaatagttttattgtcaacacctataat
cactattcacctacattgtttgcagcaatttttgaaccaattttacaaaatctttggtta
gatatgaattcctattgttcattcatttatgataatcataaattaccattacaaatactt
aatcagatttgtaatgtttcggtcggaaaatccaattatccaattggtgaattgctaaca
aattctcaaacgataaattggttattaccggctaccatttcagaatcgaatggtcgtgaa
ttttctaaaattgcatacatgtcaccatttttgcgattgtcagtgtttgctgaagatgat
ccaaaaattgtcgataaatactatccaagtaaaaatggtcatgatgtagtcaaacaaacg
acaatagatctgcaaaatactttggattatattcgtcgtgatctactatatccaatattt
cattctttattattgaatcataaaagtcgtgcaagaactgttgaatttttcactgaagca
ttactgagaaacagtactcgttcacgtttacatttggatgaaaaatctgttgcatccgat
ggctttttcaccaatctcactagtgttttacaattactttcggtgaaaatcaagcgtgaa
aaaattgatccattatttcctatgaatcaaaacaatccattggccatcaaaaaagatgat
tcacgaatcaagttcaatcaagctgaagccgagaaatggcttgaacaagagatggcaaaa
ccagattttgcttggaatgaagtaacattttcgacacaatgtttttttcaaactttatat
gcacatcatataagcgtcataccatgcatccgaaaacatatgcggcgtttgagaaccatc
cgagaattgaatcgtttcattgaagctcaccagactgatcaatccaatcggctgcgtcgt
tataaagaacaaatgttgcgatatcataaatcaaaactttgtgctgaagctggcctattg
gacgaacgattccttggtcgttgtatgatattctataatcaatttattcatttcttgttg
aaattaattaattgtgataatgaatatgatctggaattaccattgcctcaaaatgtacca
ccaatttttgccagttatccagattggtatctagaggatttggctgattttcttatcttc
attattcaacattgttcgacaatattggaaccaccaaatccatattatgattcagccaat
tttgaatgcttgattctattcattatagtggtcatttgttcaccacattatataaacaat
ccctatttgactgcaaaattcatcgaaattgtttttctatcgagcccaattgtcaacact
cattcatcgacatttcacgcaaaaatcatgaatcatccattagccgatcaatatctagtt
cgtgctctaatgaaattctacactgatgttgaaatcactggtacctcgaatgaattttat
gataaatttaccattcgttatcatattagtattatattcaaatcattttggacaaatcaa
aaacaacaatttgccattattaatgaagccgataatggaaaaaattttgtcaaattcatc
aacatgttgatgaacgacacgactttcttgttggatgaagcattggtttctttgaaacga
attcatgaaattaaagaggacatgaaaaatcctgaaaattggaatagacaaacacgagaa
caacgagaaactcgtgaacgccaactagcattcgatgaacggcaatgtcgttcattttta
attttggctgtcgagaatgttgacatgttgcattatctgacaaaaacggtacaaaaacct
ttcgaagctgtggaactcattgatagattggctgcaatgctcaactttaatctacaacag
ctttgtggtaaaaaatgtaaaagtcttaaagttccaaatccagaaaaatatggttgggat
cccaaatatttactcgacaagattactgatatttatttgcatttaaagtccaaaaaattt
tatcaagccattgccaatgatgaacgatcatatagtcatgaattattcaaagatgctgca
tcgaaaatggaacgtatccatattaaatcacaacataaaattgaatcatttttattgatt
atatcagaagtggaaaaaattctcgaggttaaaaaacagatggaaattgattttagtgat
gcaccagaaaattataaagatccattaatggatacaattatggatgatccggttatattg
ccaagtggaaacataatggaccgatctgtgataattcgtcacttgttgaatgcttctact
gatccattcaatcgtcaaccattgaatgaagatatgcttgtaccaaatgataagcttcga
caagaaatcaaagaatggaaacagcagaagattcgcaatgcaaaacatgaaaagaaaaac
gctgaaactgataccgatgaaactgaagaacaatga
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integrated database retrieval system
