Dermatophagoides farinae (American house dust mite): 124494028
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Entry
124494028 CDS
T08043
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit Pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124494028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124494028
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124494028
mRNA degradation factors
3'-5' decay
Pan complex
124494028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
124494028
NCBI-ProteinID:
XP_046913118
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MVFIKFQSILCDRKLINIMDGLLPSSTTTTNGNTKVINSFFPNPVTTTNRDYLNSTISQA
QAVDYFGLDHQSTAGLQQQPDVTHSNNYAAVVAAAAAAAAATASASMPSESSHHHYGSTP
YVTTMAADNVIAAFYDHHHHQQQQQQHQQQQHHHHHHHQQQQQQQQHQAAHVITSRLSQL
NIDSTNVTTQAQIQKSVQYPNHDLNSSSSSSSMLQHQQQHNSTTTKPPPSSLLSSTSTTT
TAAIITSQQQQQPQQIVDNSNASFFIADSIREELTRRMAKTQEMVSETTNIEIPAKVDVF
IDLIQIEPLSGASSFTFNGMISTVYRGTNSETGQLFCLRRFHAFQPNTANAKLLMGTIES
WKRIQHPNIIALRQVFTTKAFGDSSVIFVYDYHPLSTTIMSCYFSNQLNSLGGGHSTTMT
MNGYSTSSRPYSQQQQNTRKFLPEQTIWNFIIQISSALRTIHQSNLAFRSLDPTKILITS
GLNGTHSSANRGRDARVKLSFCGVTDILTLDTIHPSTNHRAFIQHLQQEDLILFGRLCLA
IASNSLTAFTALQRDHHSNLQEYLDSMPRSYSNDLRNLIMYLISFKTNSANKPRSIDDIM
PMIGARFYMQLDYFYLRYDYLYDELAKEVDNGRLLRLLSKLGTINERPEHQLDPTWSETG
DRYMLKLFRDYLFHQCDEAGKPWLDLGHIISNLNKFDIGSPEKICLISRDAQNVIIVSFE
ELKRCFEAAINDLMQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggtttttattaaatttcaatccatattgtgcgataggaaattgatcaacatcatggat
ggcttattgccatcatcaacgacaacaaccaatggaaatacgaaagtgattaacagtttc
tttccaaatcctgtaacgacaacaaatcgagattatcttaattcaactatatcacaagca
caagcagttgattattttggtcttgatcatcaatcaacagccggattacagcaacaaccg
gatgttacacattcgaataattatgcagcggtagttgcggcagctgccgctgcagcagca
gcaacagcttcagcatcgatgccttcagaatcatctcatcatcattatggttcgacacca
tatgtgacaacaatggctgccgataatgtgattgccgcattctatgaccatcatcatcat
caacaacaacaacaacagcaccaacaacaacaacatcatcatcatcatcaccatcagcag
cagcagcaacaacaacagcatcaagctgcacacgtaatcacttcacgtttatctcaatta
aatattgattcaactaatgtgacaacacaagcacaaatacaaaaatctgttcaatatccg
aatcatgatctaaattcttcatcttcatcatcatcgatgttacaacatcaacaacaacat
aattcgactacaacaaagccaccgccatcatctttattatcatcaacatcaactacgacc
actgcagccataattacttcacaacaacaacaacagccacaacaaattgttgataattcg
aatgcatcattttttattgccgattcaatacgtgaagaattgacacgaaggatggctaaa
actcaggaaatggtctctgaaacgacaaatatcgaaataccagccaaagttgatgtgttc
attgatttgatacaaatcgaaccattatctggagccagttcatttacattcaacggtatg
atatcaactgtttatcgtggaacaaatagcgaaactggtcagttgttttgtttacgaagg
tttcatgcatttcaaccgaatacagccaatgctaaattgttgatgggcacaatagaatca
tggaaaaggatccaacatccaaatataatagcattacggcaggttttcactacaaaagct
tttggtgacagttctgtgatatttgtctatgattatcatccactctccacaactatcatg
tcctgttatttttccaatcaattaaattctcttggaggtggccattcaacaacaatgaca
atgaatggttattcaacatcatcacgaccatatagtcaacagcagcagaatactcgaaaa
tttttacctgaacaaaccatatggaattttatcatacaaatatcatcggcgttaagaaca
atccatcaatctaatctagcatttcgatcattagatcctacgaaaattctcattacaagt
ggtttgaatggtacccattcaagtgccaatcgtggtcgtgatgctcgtgttaaacttagt
ttctgtggtgtaaccgatattcttacattggatacaatccatccttctactaatcataga
gcattcatacaacatttacaacaagaggatctaatcctatttggtcggctttgtttagcc
attgcatcaaattcattaacagcattcaccgccctacaacgtgatcatcatagtaatctt
caagaatatcttgattctatgcctcgttcatattcgaatgacttaagaaatttgatcatg
tatttaatatcatttaaaacaaattcagcaaataagccacgatctattgatgatataatg
ccaatgattggcgcacgtttctatatgcagcttgattatttctatcttagatatgattat
ctttatgatgaactagccaaagaagttgataatggtaggttattacgtttattatccaaa
ttaggaacaatcaatgaacgtcctgaacatcaacttgatcctacttggtcggaaactggt
gatcgttatatgttgaaattatttcgcgattatctattccatcaatgcgatgaagctggt
aaaccatggcttgatcttggtcatatcatatcaaatttaaataaattcgatataggatcc
cctgaaaagatttgcctaatttcacgtgatgcacagaatgtaattattgtttcatttgaa
gaattgaaacgttgtttcgaagcagcaatcaatgatttaatgcaatga
DBGET
integrated database retrieval system
