Dermatophagoides farinae (American house dust mite): 124494091
Help
Entry
124494091 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03030
DNA replication
dfr03410
Base excision repair
dfr03420
Nucleotide excision repair
dfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124494091
03410 Base excision repair
124494091
03420 Nucleotide excision repair
124494091
03430 Mismatch repair
124494091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfr03032
]
124494091
03036 Chromosome and associated proteins [BR:
dfr03036
]
124494091
03400 DNA repair and recombination proteins [BR:
dfr03400
]
124494091
DNA replication proteins [BR:
dfr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124494091
DNA Replication Termination Factors
ELG1-RFC complex
124494091
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124494091
DNA repair and recombination proteins [BR:
dfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124494091
Check point factors
HRAD17(Rad24)-RFC complex
124494091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
AAA_lid_RFC1
Rad17
RCF1-5-like_lid
AAA_11
AAA_assoc_2
RuvB_N
ResIII
AAA_24
AAA_22
AAA_5
AAA_2
AAA_14
AAA_28
AAA_19
DEAD
MSC6_C
Mg_chelatase
AAA_18
DUF815
AAA_7
AAA_23
AAA_16
AAA_3
AAA_30
TIP49_C
TIP49
bpMoxR
IstB_IS21
DO-GTPase1
ATPase_2
SLFN-g3_helicase
AAA_27
RNA_helicase
DUF4359
DDB_G0280785_1st_TPR
Motif
Other DBs
NCBI-GeneID:
124494091
NCBI-ProteinID:
XP_046913200
LinkDB
All DBs
Position
6:2008300..2009448
Genome browser
AA seq
345 aa
AA seq
DB search
MDNDSSKDSQSTPVNKFKTWVEKYRPSRLDDIVYQNEIVNSLKSIIASNACNLPNFLFYG
PPGTGKTSTIIALSKQLFGVEHYKNRVLELNASDERGIQVIRDKVKSFAQRTISNNNQVA
AIKIIVLDECDSMTKDAQSALRRIMEKYSATTRFCLICNYVSKIIDPIISRCTVYRFKPL
KTDLVKATLLKVGHQEGFKVSDKTLDILIEISEGDLRKAITLIQTLSLINDGGDDDEISS
DDICEIAGQVPLKRIEHFFNICRNSKSYSQLLTETKQIIHAGYSATQFLCQLQEWLAMSD
ECLLNDGQKSRICWQIGIADKRLLDGCDEFLQLLQVGSCIMQTVG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgattcatctaaagattcacaatcaactcctgttaataaattcaaaacatgg
gtggaaaaatatcggccatcacgattggatgatattgtatatcaaaatgaaattgttaat
tctttaaaaagtattattgcatcaaatgcttgtaatctaccaaattttttattctatggt
ccaccgggtaccggcaaaacatcaaccattattgcattgtctaaacaattgttcggtgtt
gaacattataaaaatcgtgtactcgaattgaatgcatcagatgaacgtggtattcaagtg
atccgagataaagtaaaatcatttgcccagcgaacaatatccaataacaatcaggtggct
gctattaaaatcattgtactggatgaatgtgattcgatgaccaaagatgcacaatccgct
ttacgacgaattatggaaaaatattctgctactacacgtttctgtttgatatgtaattat
gtatcaaaaataatcgatccaatcatatcacgttgtactgtttatcgattcaagccactc
aaaactgatcttgtgaaagcaacattgttgaaagttggtcatcaagaaggattcaaagtt
agtgataaaacattggacatattgatagaaatatccgaaggtgatcttcgtaaagcgatc
actttgatacaaacattatcattgatcaatgatggtggtgatgatgatgagatcagttcg
gatgatatttgtgaaattgccggtcaagtaccgttgaaacgtatcgaacattttttcaac
atatgtcgtaacagtaaatcatattcgcaattgttgaccgaaactaaacagattatccat
gcaggctattctgccacacaattcctttgtcaattacaagaatggctagccatgtccgat
gaatgtttgttgaatgatggacaaaaatccagaatttgttggcaaattggcatagcagat
aaacggctactggatggttgtgatgaatttctacaattgttacaagtcggttcatgtatc
atgcagactgttggttaa
DBGET
integrated database retrieval system
