Dermatophagoides farinae (American house dust mite): 124494142
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Entry
124494142 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC124494142
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124494142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfr03021
]
124494142
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124494142
Transcription machinery [BR:
dfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124494142
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
124494142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
124494142
NCBI-ProteinID:
XP_046913257
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MKKNPLDELMAPMMIPPSPDDIIPLGSNHHIPVTKRSNEPRKPNNVVASKIKNIKNRRQS
PTRLPLPPVSQSYAPSHNLPYDNSPIVSAPPPPPPPQPAAATTTTVPNQPFLEPPYGSSA
LFIDKQFCRLFYLDPTTGVVPFKVHADTPFDQLMSTDPMFLEPKQVYFSGHPTKVIIDPG
TASEQSFCLNFNNPTPYLFHLSGIPHPQRIMLGLPDRELIVNDRPYKAQFGGAPVPIYFE
ADLQTHLFLLSDSKPFLQVSDEPRYDLWNRLVDEAKAKMSRHQQQQQQLPPPSTTTHLPF
NYGPSINNNIPSNTMISSTTNVVTTNTYLIQPTTMQQPASTQIVSADLMQQPPTSTQVPF
NYGPSINNMHSNIMIPSSTTNVSTSNIYHPQPTPPVSTQIVSAELMQPPPPTTTHLSFNY
GPSINNMHSNTMIPSPTNNVPTTNTYHLHSTAMQHSTPVSTQIAANELMQQPSTITTTQA
SFQQQPTSASAKPALSDLGSLLSKLSAAGLISNKTVSTFTGTSTTTTTTTTNDSNKMKKA
QTTEPKRYLSLEMSQLKQYHQFVINQLYNGLQCTNCSLRFPNESDSGKKSRYSRHLDWHF
RQNRRXKIKPEFGSAALAHRRPWYYTIDQWILYKEVNDDIEENNGGFFDSNSADSPSSAA
HRANQFNMKFAQFKDCIGEFDQFIEVISCDNINVMSNNNKDDSNNQKICSVVADSDVTSN
CTVCNEPFKIEWYEDEEEWRLINAVCFSVAGNDEQQPAAVGRPFHPLCLKDHLLQQLEKQ
SIQNNEHLDESNQNLSLNSMMIHIN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatccattagatgaacttatggcaccaatgatgataccaccatcacctgat
gatattataccgcttggatcgaatcatcatattcccgtaacaaaacgttcaaatgaacca
cgtaaaccaaataatgtggtggcatcgaaaattaaaaatataaaaaatcgtcgccaatca
ccaacacgacttccattgcctcctgtttctcaatcatatgcaccatcacataatctaccg
tatgataattctccgatagtgtcggcaccacctccaccaccaccaccacaaccagcagca
gcgacaacaacaacagttccaaatcaaccatttcttgaaccaccatacggttcatctgct
ttattcattgacaaacaattttgtcgtcttttctatttggatccaacaaccggagttgta
ccattcaaagttcatgccgatactccattcgatcagctaatgtcaactgatccaatgttt
ttggaacctaaacaggtttatttttctggtcatccaaccaaagtgattattgatcctggt
acagcatcggaacaaagtttctgtctaaatttcaataatcctacaccatatttatttcat
ttatcgggaataccacatccacaacgcattatgcttggtttacctgatcgagaattaatc
gtcaatgatcgaccatacaaagctcaatttggtggtgcaccagttccaatctattttgaa
gccgatcttcaaacacatttatttttattatcagattcaaaaccatttctacaagtatcg
gatgaaccacgttatgatctttggaatcgtttggttgatgaagctaaagcaaaaatgtca
cgtcaccagcaacaacaacaacaactaccaccaccatctacaacgacacatcttccattc
aattatggtccatcgattaacaacaatataccttcaaatacaatgatatcatcaactact
aatgttgtaacaacgaatacatatctcatacagccaacaaccatgcagcagcccgcttca
acacaaattgtttcggccgatttaatgcaacaaccaccaactagtacacaggtgccattc
aattatggtccatcgattaacaatatgcattcaaatataatgataccatcatcaactact
aatgtttcaacatcaaacatctatcatccacaaccaacaccaccagtttcaacacaaatt
gtttcggccgaattaatgcaaccaccgccacctacaactacacatctttcattcaattat
ggtccatcgattaacaacatgcattcaaatacaatgataccatcaccaactaataatgtt
ccaacaaccaatacctatcatctacattcgacagccatgcaacactcaactccagtttca
acacaaattgctgcgaacgaattaatgcaacaaccatcaaccatcactactacacaggcg
tcattccaacagcaaccaacatctgcttcagctaaaccggcattatccgatcttggttca
ttgctatctaaattatcggcagccggtttaatctccaataaaacagtttcaactttcact
ggaacatcgacaactacaacgacaacaactaccaatgattcgaataaaatgaaaaaagct
cagaccacagaacccaaacgatatctatcgttggaaatgtctcaacttaaacaatatcat
caatttgttatcaatcaactttataatggacttcaatgtacaaattgttcgcttagattt
ccgaatgaatctgattctggaaaaaagagtcgatattcacgtcatttagattggcatttt
cgacagaatcgtcgtngaaaaattaaacctgaattcggttcagctgccctcgcacatcgt
cgtccttggtattatacgattgatcaatggattctttacaaagaagttaatgatgatatt
gaagaaaataatggcggatttttcgattcaaattcagccgacagtccaagtagtgcagca
catcgtgcaaatcaatttaatatgaaatttgcacaatttaaagattgtatcggtgaattc
gatcagttcatcgaagtaataagctgtgataatattaatgtgatgtcaaacaataataaa
gatgattcaaataatcagaaaatttgttcggttgttgccgattctgatgttaccagtaat
tgtactgtttgtaatgagccattcaaaattgaatggtatgaagatgaagaagaatggcgt
ctaatcaatgccgtgtgcttttctgtagccggaaacgatgagcaacaacccgccgccgtt
ggtcgtccatttcatccgctttgccttaaagatcatctgttgcaacaattggagaaacaa
tcgattcaaaataatgaacatcttgacgaatccaaccaaaatctatcactaaattcaatg
atgatacacatcaattaa
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