Dermatophagoides farinae (American house dust mite): 124494210
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Entry
124494210 CDS
T08043
Symbol
su(f)
Name
(RefSeq) cleavage stimulation factor subunit su(f)
KO
K14408
cleavage stimulation factor subunit 3
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124494210 (su(f))
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124494210 (su(f))
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124494210 (su(f))
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
NRDE-2
Motif
Other DBs
NCBI-GeneID:
124494210
NCBI-ProteinID:
XP_046913334
LinkDB
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Position
6:complement(3920488..3923982)
Genome browser
AA seq
812 aa
AA seq
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MMTNVKTEPSSSSSSTTLSISSSNQDNSTATTTAGSVTDKNPGASTTTNDLQNNLQPTPG
SLKNVSDRVLIAKAKLVESPYDLDAWNILIKDVQNKTPEISRELYEQLVSQFPTSGRFWR
LSIEQEIKCKNYERVEKLFQRCLVKVLNIDLWKCYLNYIKEAKHHLPSFREKMGQAFDFA
LEKMGIDIHSYSIYNDYVQFLKGVDAQGSYAENQKISAVRRVYQRGIIIPMLNIETFWKE
YLAYEQSINPMFVDKAITDRSKDYMNARRVAKEFEATTRGLNRNAPAVPPHSTPEENRQV
ELWKKYIQWEKQNPLKTEDVTSVIKRVVFAYEQCLLCLGHHPDIWYEYASYLDENSKIMA
EKGDMNHHKALQEDVASVYDRATSTLLKENILLHFSYADFEESRNRKDESIKIYEKLLHI
KTIGFNPTLTYIQYMKFTRRTESMSSARAIFKRARADSRCGYEVYIAAAMTEYYCSKNMN
ISCKIFELGLKRFLHEAPFILAYIDFLGHLNEENNIRVLFERVLSSDSVPISKSLEIWNR
FLEFESQIGDLASVINVEKRRLNVIEKLQQQQKNHSETAWLVDRYKFLHLMPCTQEELKS
IGYFNINPSAASSSLSSSSTSAISESLVNGHSMKMSMDIDRSSKIHRHNLKNSTKSSIPV
PNLSQMVPFKPVQNPVNNLMPGGIFPYPPSITSLLSQLPPPLSFRGPFVNIDELMSIFKT
SPAISFLTDPSKTNCLMPTDAKGYFALALEASDSFNFGSGIGNSGSSGTKRSAGQASLMD
EDDDGDGEGSNLMPPQFDIYRSRQMHKKSKNL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaacgttaaaactgagccatcatcatcatcatcatcaacgacactatcgata
tcatcatcgaatcaagataattctacagcaacaacaacggctggatctgtaaccgacaaa
aatcctggcgcttcaacaacgaccaatgatttacaaaataatttacaacctactcccggt
agtttgaaaaatgttagtgatcgtgtattgattgcaaaagctaaactggtcgaatcacca
tatgatttggatgcatggaatattctcatcaaagatgttcagaataaaactccagaaatt
tcacgcgaactatatgaacaattggtcagtcaatttccaacatccggacgattctggcgt
ttaagtatcgaacaagagattaaatgtaaaaattatgaacgtgtagaaaagctatttcaa
cgttgtctggtcaaagtactcaacattgatctttggaaatgttatcttaattatataaaa
gaagctaaacatcatctaccatcatttcgagaaaaaatgggccaagcattcgattttgca
ttggaaaaaatgggcatcgatatccattcatattccatctataatgattatgttcaattt
cttaaaggtgttgatgcccaaggtagctatgcggaaaatcaaaaaatatcggctgttcgt
cgtgtatatcaacgtggcataatcataccaatgttgaatattgaaacattttggaaagaa
tatctagcctatgaacaaagtattaatccaatgtttgtcgataaagccattaccgatcga
tccaaagactatatgaatgccagacgtgtagcgaaagaattcgaagcaaccactcgtggc
ctaaatcgaaatgcaccggctgtaccaccacattcaacaccagaagaaaatcgtcaagtt
gaattatggaaaaaatatatacaatgggagaaacagaatccattgaaaactgaagatgtt
acatcggtcatcaaacgagttgtatttgcttatgaacaatgtctactatgtttgggtcat
catcctgatatttggtatgaatatgcatcatatttagatgaaaatagtaaaataatggcc
gaaaaaggtgatatgaatcatcataaagcgctacaagaagatgtagcatcggtttatgat
cgtgcaacatctacattgttaaaggagaatattctgttacatttttcatatgccgatttt
gaagagtctcgtaatcgaaaagatgaatcgattaaaatttatgagaaattacttcatatc
aaaacgattggttttaatccaactttgacttatatacagtatatgaaattcactcgtcgt
actgaaagtatgtcatcggcaagagcaatattcaaacgggcccgtgccgattctcgttgt
ggttatgaggtgtatatagctgctgctatgactgaatattattgtagcaagaacatgaat
atttcatgtaaaatattcgaattaggattaaaacgattcctacatgaagcaccattcata
ttggcttatattgattttctaggccatttgaatgaagagaacaatatacgtgtactattc
gaacgtgtactttcatcggattcagttccaatatcgaaatcattagaaatatggaatcgt
tttctagaatttgaatcacaaataggtgatttagccagcgttattaatgtggaaaaacga
cgattaaatgtgattgaaaaacttcaacaacaacagaaaaatcattccgaaacagcatgg
cttgttgatcgctataaatttcttcatctaatgccatgtacacaggaagaattaaaatct
attggttattttaatataaatccatcagctgcatcatcatcattgtcatcatcatcaaca
tcggccatttcggaatcattggtcaatggccattcaatgaaaatgtctatggatattgat
cgttcatctaaaattcatcgccataatttaaaaaattcaacaaaatcatcgattcctgta
ccgaatctatcacaaatggtaccatttaaacctgtacaaaatccagtcaataatttaatg
ccaggaggtatttttccttatccaccatcgattacatcattattatcacaattaccacca
ccattaagttttcgtggtccattcgttaacattgatgaattgatgtcgatattcaaaaca
tcacctgctatttcatttctaactgatccaagtaaaacgaattgtcttatgcctaccgat
gctaaaggatattttgcattagcacttgaagctagtgattcattcaatttcggtagtggc
attggaaattctggatcatctggtacaaaacgttcagctggtcaagcatcattaatggat
gaagatgatgatggtgatggtgaaggatcgaatctaatgccaccacaatttgacatttat
cgatcaagacagatgcataaaaaatcgaaaaatttgtaa
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