Dermatophagoides farinae (American house dust mite): 124494213
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Entry
124494213 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC124494213
KO
K11125
protein SMG5
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124494213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124494213
03032 DNA replication proteins [BR:
dfr03032
]
124494213
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124494213
mRNA cycle factors
Common to processing body (P body) and stress granule
124494213
DNA replication proteins [BR:
dfr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
124494213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
124494213
NCBI-ProteinID:
XP_046913336
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MMFAINREKFCVKLPPSRYELESKHKLILDLSNKLDSQHQQVKTLKQLYSNTLIEQRRQL
SDEISFLFRHAPIEYGRVFEDILWKRNYYDCVKFFKKYRRHFQPQQSQSVNDSLNNELIS
LFRSHLISGIGHYHSLIVSFRKGFHLSYLDQSIFLPILASNQLPNNALDDSPFKVSAKSS
IFQKPKQRLIIANEDDNDDQAIIKRFNFDDDGSGNDEQADEEAIIEFDTEYTYDEKFKDT
LMFLVHRFFICIGDLARYYVDFFPSTSVVVDTAIERFDEQYFQIASLYYQLASLLQPQLG
MPYNQLGTLYANSFYGLDSIYYYFRCLNSKKKFLGIKDNLKNTFTFVRNKMQENTNHLPQ
KSSSTNGFIVGSLTEQNFQNDQELVRSTINRMMDIFSRIFNLIDELENESQSIPASKLYS
NINDVLILFRNALNITSSTADAKSSSRLKPNRLTASNIFQIISITMVLIDQIKISLKKNN
IDVNLGMIDLSKLESNNLKGNVDVRGNFLLYISYHFLFQIVTMVIHRESEVLKKMMYVSQ
NLMDDNPRIFQQKHKFANNRKKKSKNPSFNSDSLRKHYQSAHSFSSDYGDCPNDEAMAEL
KNRVIQTIQDILDSSENEDDNDIDDDNGRNXIILDTMTNDTEYQQINHDFDYPLSTDSKT
FDQMLAFMYAESYTPIIKFFCDYLQSNGDFIEILQNMSVLIEYFEQFFNYLNLISEFDLR
LILNFKSYLEREFQTNAKQQLDKIHKLIDLFNFINQYSGYSLKDFKQSSPLSSEMAFMNL
TEELSNFYKSLFDCKDDWTLVNMKNELTIEKSCYLSIKSMIILGIKLVLLSLDNENFKLM
ATDYDLQTVHDLKQNKHVRFVFQSLQPRSDHSVSILKDDRYSLIVSKAINKCEQQLIQFD
LNDKEVENVCNNNNNDNSNSKNGNITPKNKTQKSLQNDGQKNTPVIHHQQMPSSSSSSKS
LFDLEXLPHLLIDPFVYLENLEQIKQIVQQKKAFVIVPKLVTDFLNNLKNKQIQSAVEAS
DFLHDEFFRGSRMIRFIRNEDRLELEMLSYPRKNAWIRTINDDDSDNGLGTDSGDRSNGN
KLQDLALFYELLEHCHHLLVNKVLINTRISTIGTGFKQQDDEQQQNVQITLITTDTNIAK
WPSNASTTIAQACGIDIETMDSYLAKQNIRNNNNNYKKYKFNKKYNRHQMTTTTTASSSN
CSFTNNNGRSPQKSSSNTHFRPIQFMANSAGTSLHHRQVT
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgcgattaatcgtgaaaagttttgcgtaaagcttccaccaagtcgatatgaa
ttggaaagtaaacacaaattgatattagatttatcgaataaattggattcacaacatcaa
caagttaaaacactgaaacaattatattcaaatacattgattgaacaacgaagacaatta
tcggatgaaattagtttcctgtttcgacatgcaccgattgaatatggtcgtgtttttgaa
gatatactttggaaacgaaattattatgattgtgtaaaatttttcaaaaaatatcgtcgc
cattttcaaccacaacaatcacaatcggtgaatgattcattgaataatgaattaattagt
ttatttcgatcacatctgatttcgggtattggccactatcatagtttgattgtatcattt
cgaaaaggttttcatctgtcatatttggatcaatcgatatttttaccgattcttgctagt
aatcaattgccaaataatgcattggatgattcaccatttaaagtatcggcaaaatcatcc
attttccagaaaccaaaacagcgtttaatcatcgccaatgaagatgataatgatgatcaa
gcaatcatcaaaagatttaatttcgacgatgatggtagtggtaatgatgaacaagctgat
gaggaagctattattgaatttgatacagaatatacttatgatgaaaaattcaaagatacc
ttaatgtttttggttcatcgttttttcatctgtatcggagatctagctcgttattatgtt
gatttttttccatccacttctgttgttgttgacaccgctatcgaacgattcgatgaacaa
tattttcagattgcatcattgtattatcaattagcttcgttgttacagccacaacttggt
atgccatataatcaacttggtacgctatatgccaatagcttctatggtctggattccatt
tattattattttcgttgtttaaattcaaaaaagaaatttcttggcatcaaagacaatcta
aagaatacatttacgtttgtgcgtaataaaatgcaagaaaacacaaatcatctgccacaa
aaatcatcatcaactaatggattcattgtcggttcattaaccgaacagaatttccagaat
gatcaagaattggttcggtccactattaatcgtatgatggatattttttcacggatattc
aatcttatcgatgaattggaaaatgaatcacaatcgataccggcatcgaaattatacagc
aatattaatgatgtattaatcttgtttcgtaatgccttgaatatcacgtcatctactgct
gatgcaaaatcgtcatcacgtttgaaaccgaatcgactgacagcatcgaacatttttcaa
ataatttccatcacaatggtattgatagatcagataaaaatatcactgaaaaagaacaac
attgatgtcaatcttggaatgattgatttatcaaaacttgaatcgaataatttaaaaggc
aatgttgatgttcgtggtaattttcttctttacatttcgtatcattttctttttcaaatc
gtcaccatggtaattcatcgtgaatccgaagtattgaagaaaatgatgtatgtttcacag
aatctgatggatgataatccaagaatttttcaacaaaaacataaatttgctaataatcgt
aaaaagaaaagtaaaaatccatctttcaattcggattcgttgagaaaacattatcaatcg
gctcattcattttcatccgattatggtgattgtcccaatgatgaagcaatggctgaattg
aagaatcgagtcattcaaaccatacaggacattttggattcatcggaaaatgaagatgac
aatgacattgatgatgataatgggaggaacntcatcatattggatacaatgaccaacgat
accgagtatcaacagattaatcatgatttcgattatccattgtcaacggattcaaaaaca
tttgatcaaatgttggcctttatgtatgctgaatcatatactccgatcatcaaatttttc
tgtgattatctacaatcaaatggagatttcattgaaattctgcaaaacatgtccgttctg
attgaatattttgaacaatttttcaactatctcaatctgatcagtgaatttgatttacga
ttgattctgaattttaaatcgtatttggaacgtgaatttcaaacaaatgccaaacaacaa
ctggacaagatacacaagctgattgatttgttcaatttcatcaatcaatattctggttat
tcattgaaagatttcaaacaatcatcaccattgagtagtgaaatggcattcatgaattta
actgaagaattgtcaaatttctataaatcattatttgattgtaaagatgattggacacta
gtgaacatgaagaatgaattgaccattgaaaaatcatgttatctatcaatcaaatcaatg
attattttaggcatcaaattggtactgttatcattggataatgaaaatttcaaattaatg
gccactgattatgatctacaaactgtacacgatctgaaacaaaataaacatgttagattt
gtttttcaatcattacaaccacgatctgatcattcagtatcgattttgaaagatgatcgt
tattcattgattgtatcgaaagctataaataaatgtgaacaacaattgatacaatttgat
ttgaatgataaagaagttgaaaatgtttgcaataacaacaacaacgacaacagcaacagc
aaaaatggcaacattactcccaagaacaaaacgcaaaaaagtctgcaaaatgatggtcaa
aaaaatactccagtaattcatcatcaacagatgccatcatcatcatcatcgtcaaaatca
ttgtttgatctggaanaattgccacatcttttgattgatccatttgtttatttggaaaat
cttgaacaaatcaaacaaattgttcaacagaaaaaagcgtttgtaattgtgccaaaattg
gtaactgactttttgaataatttgaaaaataaacaaattcaatctgccgttgaagcaagt
gattttcttcatgatgaattttttcgtggttcacgtatgattcgatttattcgtaatgaa
gatcgtctggaattggaaatgttgagttatccacgaaaaaatgcttggattcgaactatt
aatgatgatgatagtgataatggacttggaacggattcaggtgatcgcagcaatggtaac
aaattgcaagatttggcattgttttatgaattgcttgaacattgtcatcatttattggtc
aacaaggttttgatcaatacccgtatttcgactattggaactggatttaaacaacaagat
gatgaacaacaacaaaacgttcaaattacattgattacaaccgatacgaatattgctaaa
tggccatcgaatgcttcgacaaccatagcacaagcttgtggtattgatattgaaacaatg
gattcgtaccttgccaagcaaaatattcgtaataataataataattataaaaagtataaa
tttaacaagaaatacaatcgtcatcaaatgacaacaacaacaacagcatcatcatctaat
tgttctttcaccaacaacaatggtcgttctccacaaaaatcttcatcaaacactcatttt
cgaccaatacaatttatggccaattcagctggaacatctttacatcatcgacaagtgaca
tga
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integrated database retrieval system
