Dermatophagoides farinae (American house dust mite): 124494570
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Entry
124494570 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr04382
Cornified envelope formation
dfr04512
ECM-receptor interaction
dfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124494570
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124494570
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124494570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfr04147
]
124494570
00536 Glycosaminoglycan binding proteins [BR:
dfr00536
]
124494570
Exosome [BR:
dfr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
124494570
Glycosaminoglycan binding proteins [BR:
dfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124494570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
124494570
NCBI-ProteinID:
XP_046913717
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MMNSSQILYSSILLLFVIVFQSTTADSPIQPPPQYRKNCQCFASKCYCIGEVGEPGNPGI
VGFRGVQGQPGKIGPPGFKGNRGQFGLLGDIGDIGPKGIRGDMGVRGFDGQIGLAGSPGL
TGEMGPTGVDGCNGTDGMMGLPGPNGWPGLVGPPGIFGPRGPKGEPGDGGYNSFGTKGDA
GDAGRAGFPGISGRVGPIGLVGDVGSPGKRGPKGDPGDVGPAGSSGPESRAPKGLKGEKG
PAGDIVYLSIQKNKTIIPPSAQLKGDKGEKGEKGMKSLPGIQGRKGVMGLQGVKGIRGQK
GERGDEGPRGEPGNQGQTGIHGEKGQKGEPGLEGLVGFMGQKGDQGNQGLSGRVGPQGDP
GPKGKLIEVGVSLPGPQGIQGPPGESGFPGQFGPSGPIGSIGYPGSAGEPGPAGNDGLLG
KPGLSPIGDRGDDGLPGNSGNSGRVGFTGLQGIKGNKGEKGENVYGPRGEAGNDGLYGLP
GLPGIRGDNGATGDAGYPGQGVPKMGRPGENGLRGEPGDVGDDGLNGLPGIPGPKGEKGW
DCVSCPPALNGEKGESGEFGRDGFFGAPGFNGDSGLAGLKGSSGIAGLPGYSGEKGDLGS
DGIFGRKGPKGDPGEVISLGFVTIGDIGDPGQKGEAGESGIDGKTGASGLNGLFGLKGDQ
GEFGDPGIAGQSGPDGINGTPGVRGEKGTTVYGLPGLQGRIGEKGQKGMIGDYGFKGMKG
DSFYAPDPIVLQAFKGKQGPQGPRGDRGDAGIIGISGRDGKNGLPGMAGYKGDAGRNGIS
QAGPMGFKGYQGFAGDPGNRGKKGAKGLTGKPGLAGFPGEKGVMGDTGDDGEMGLPGLNG
RPGPKGFYGDIGPRGWVGFNGDAGDPGMAGPKGDDGRPGLSGLKGEKGSIGPTMAGSQGL
AGKPGRNGVDGEKGDIGDEGVAGAPGMFGPKGSIGDIGINGVMGEPGRHGKDGHRGLDGL
EGARGLPGLKGDPNFGLPGPNGVSGEHGHYGPKGIKGDTGDPGLSASFYSLPGEKGEIGD
PGDSGYPGPKGISLYDKGIKGEMGDNAPPGLKGPKGELGYPGILGYKGIKGEPGQIIRGT
KGVKGDHGDNGRIGLPGIEGPKGTIGERGDDGFIGPIGEQGSVGEYGRIGPVGRNGFPGL
PGLKGSKGESGPPGLKGEKGNRGLNGNPGLMGIAGARGEPGINSQMIKGDKGDPGPRGLP
GLKGMSGDSGYQGVAGLKGSIGDTGYLGLPGLDGLIGLKGIQGDQGLPGRVFNITVAQPP
NVIGDHGLPGLPGPAGKPGTFVVGEKGEIGHVGRTGLPGIPGAKGQTGPAAIPGISGIKG
TKGDQGLAGLVGRQGLVGLQGWRGNKGLSGLKGYKGEIGDSGFPGFSGQAGPMGDSGDSG
FAGRDGLQGIKGMKGYPGDLDRDKIVIMKGERGDFGDAGPQGISGRAGASGFKGYIGDKG
MVGMAGQPGQYGLKGIRGDPGFIGLSGLPGPVGDPGLQGEKGAKGTRIKTIGYYFTRHSQ
NIHDPPCPNNSTPMWTGYSLLYIMGNEKAHGQDLGSPGSCLRRFSTMPYMFCTINEVCNF
ASTNDYSYWLSTDEPMPMDMRPIRNDRIRNYIGKCSVCESTTQVIAIHSQNTMEPFCPGG
WQSLWTGYSFFMNTDSGGEGSGQTLSSPGSCLEQFRPNPFIECHGHGSCNLYSTANSYWL
SSIDHNDQFRIPESETFKAGDLTRKISRCRVCMRVI
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcttcacaaatattgtattcatcaatcctattattatttgtaattgttttt
caatcgaccactgccgattcaccaatacagccaccaccacagtatagaaagaattgccaa
tgttttgcatccaaatgttattgtattggagaagttggtgaaccggggaatcctggtatt
gttggttttcgcggcgttcaaggtcaaccaggaaaaattggcccgcccggttttaaagga
aatcgtggtcaattcgggttattaggtgatattggcgatataggaccaaaaggtattcgt
ggtgatatgggcgtacgtggatttgatggccaaatcggtttggctggttcgcctggtctt
acgggcgaaatgggcccaacaggtgtcgatggctgtaacggaactgatggaatgatgggc
cttccgggtccaaacggatggccgggacttgttggccctccaggtatttttggaccacga
ggtccaaagggtgaacctggtgatggtggatataactcatttggcactaaaggagatgcg
ggagacgcaggacgagctggtttccctggcatttccggtagagtgggtcccatcggtttg
gtgggtgatgttggatcacctggtaaaaggggtccaaaaggtgatccaggtgatgttggt
cctgccggttcatcaggaccagaaagtcgtgcaccaaaaggtctaaaaggagaaaaaggt
cccgcaggcgatattgtttacttatctatccaaaaaaacaaaaccatcataccacctagt
gctcaattaaaaggggataaaggcgaaaaaggtgaaaaaggaatgaaatcacttccgggt
atacaaggccgaaaaggagtaatgggtctacaaggagttaaaggaattcgaggccaaaaa
ggagaacgaggtgatgaaggaccacggggcgagccaggaaatcaaggacagaccggaatt
cacggagaaaaaggacagaaaggggaacctggtctcgaaggtttagtcggttttatggga
caaaaaggtgatcaaggaaatcaaggcctttccggaagagttggtcctcagggggatccg
ggaccaaaaggtaaactcatagaagttggtgtctcgttacctggcccccagggtatacaa
ggtccgccgggtgaaagtggttttccaggccaattcggtccttccggtccgattggttcc
atcggttacccaggaagtgctggcgagcccggtccagccggaaatgatgggttgttaggc
aagccaggacttagtcctatcggcgatcgcggtgatgacggtttacctggaaattccgga
aattctgggcgtgttggttttacgggacttcaaggaattaaaggcaataaaggtgaaaaa
ggcgaaaatgtctatggtccacgtggcgaagccggaaatgatggattgtatggattgcct
ggcctaccaggaattcggggtgataatggcgctacaggtgatgctggttatcctggacaa
ggtgtaccgaaaatgggcaggccaggtgaaaacggattgcgtggcgaacctggtgatgtc
ggcgatgatggattaaatggattacctggtatacctggacccaaaggtgaaaaaggctgg
gattgtgtttcatgtccaccggcattaaatggagaaaaaggagaatctggtgaatttggc
agagatggatttttcggggctcctggtttcaatggggattctggtttagccggtttaaaa
gggtcaagcggaatcgctgggttgcctggttattctggtgaaaaaggggatttgggtagc
gatggaatttttggcagaaaaggtcctaaaggtgatccaggtgaagtcatttctctgggc
tttgtaacaattggtgatattggggatcctggccaaaaaggcgaagctggagaatcggga
attgatggaaaaaccggcgcttctggtctgaacggtttgtttggattaaaaggagatcag
ggagaattcggggaccctggtattgcgggacaatctgggcccgatggtataaatggcacg
ccaggggttcgtggcgaaaaaggcacaactgtttatgggctacccggtttacaaggtcga
atcggagaaaaaggacagaaaggaatgattggtgattatggtttcaaaggcatgaaaggc
gattcattctatgcacccgatccaattgtattgcaagcattcaaaggaaagcaaggtcca
cagggtcccagaggcgatagaggtgatgcgggtataatcgggatatccggaagagatggt
aaaaatggcctgcccggaatggcgggctataaaggcgatgcgggtcgaaacggaatttca
caagctggtccaatgggattcaaaggttatcaaggtttcgccggggaccctggtaatcgc
ggaaaaaagggcgcaaaaggactaacaggaaaacctggtttggctggattccctggtgaa
aagggcgtgatgggtgatactggcgatgatggcgaaatggggttacctggattgaatggg
cgacctgggcccaaaggtttttacggcgatattggaccaagagggtgggtgggatttaat
ggcgacgcaggagaccctggaatggctggtccaaaaggagatgatggtcggcccggtctt
tcgggtttaaaaggagaaaaaggatcaattggcccaacgatggcaggaagtcaaggtttg
gccggtaaacctggtcgtaatggcgttgatggtgaaaaaggtgatatcggtgatgaagga
gttgccggagcaccaggaatgtttggtccaaaaggttccatcggtgatattggaataaat
ggcgtaatgggtgaacctgggcgccatggaaaagatggccatcgcgggctagacggtcta
gaaggagcaagaggattacccggcttaaaaggtgaccctaatttcggtcttcctggtccg
aatggtgtttcaggcgaacacggccattatggtccaaaaggcatcaaaggtgataccgga
gatccaggcttatcagcaagtttttattctcttcctggagagaaaggagaaattggggat
ccgggcgattctggctatcctggaccaaaaggaatatctttgtatgataaaggaatcaaa
ggggaaatgggcgacaatgctcctcctggattaaaaggtccgaaaggcgaattaggctat
cctggaattttgggttataaaggaataaaaggtgaacctggtcaaattatccgaggaaca
aaaggcgtcaaaggcgatcatggtgataatggaagaatcggtttaccaggaatcgaaggt
ccgaaaggaacgattggtgaacgcggagatgatggatttattgggccaattggagaacaa
ggatccgtcggtgaatacggtcgaattggcccggttggtagaaatggatttcctggtttg
ccaggattgaagggttctaagggagaaagcggaccacctggattaaaaggtgaaaaagga
aatcgcgggcttaatgggaacccgggcttaatgggaatcgctggtgctcgaggagaacca
ggaataaattcacaaatgattaaaggcgataaaggcgatccaggaccaagggggttacct
ggattaaaaggaatgagcggggattcaggttatcaaggtgttgcgggtttgaaaggatca
atcggtgacacaggatatttaggacttccgggacttgatggtcttattgggttgaaaggc
atacaaggcgatcaaggtttacctggaagagttttcaacattactgttgctcaaccacca
aacgtaattggagatcatggcctaccaggtttaccaggaccggctggaaaaccaggaaca
tttgttgttggtgaaaaaggcgaaattggacatgttggacggactggattgcctgggata
cctggtgctaaaggtcaaaccggcccagctgcgattcctggaatttctggcattaaagga
accaaaggggaccagggtttagcaggtttggttggaaggcaaggacttgttggacttcaa
ggttggagaggaaataaaggattatccggtttgaaaggctataaaggcgaaattggtgat
agtgggtttcctggatttagcggacaagcaggcccaatgggagatagtggagatagtggt
ttcgccggaagagatggtcttcaaggaatcaaaggaatgaaaggttatcctggtgattta
gatcgtgacaaaattgtaatcatgaaaggagagcgcggagattttggtgatgctggccca
cagggcatatccggtagagctggagcttccggttttaaaggatatatcggcgataaaggc
atggttggaatggctgggcaacctggccaatacggtctcaaaggaatcagaggcgatcca
ggattcattggtctaagcggattgccgggaccggtcggggaccctggtttacagggtgaa
aaaggagccaaaggcaccagaataaaaacgattggttattatttcactcgtcatagtcaa
aatattcatgatcctccttgtccaaataattcgacgccaatgtggaccggttattcactc
ctatacattatgggaaatgaaaaagctcacggccaagatttaggaagccctggcagttgt
cttcgtcgtttcagcacaatgccatacatgttctgcacgatcaatgaagtttgtaatttt
gcatcaaccaatgattatagttattggctaagtaccgatgaaccaatgccaatggatatg
cggccaattcgaaatgaccgtattcgaaattatattggaaaatgttcggtctgtgaatcc
actacacaagttattgctattcatagccaaaataccatggaaccattctgccccggtggt
tggcaaagtctttggactggttacagttttttcatgaataccgatagtggtggtgaaggc
agtggtcaaacattatcatcacctggatcatgtttggaacaatttcgaccaaatccattc
attgaatgtcatggacatggtagctgtaatctatatagtacagctaatagttattggtta
tcatctatcgatcataacgatcaatttaggatacctgaatcggaaacatttaaagctggt
gatttaaccagaaaaatttctcgttgtcgtgtttgtatgcgcgtaatctaa
DBGET
integrated database retrieval system
