Dermatophagoides farinae (American house dust mite): 124494570
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Entry
124494570 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr04512
ECM-receptor interaction
dfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124494570
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124494570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfr04147
]
124494570
00536 Glycosaminoglycan binding proteins [BR:
dfr00536
]
124494570
Exosome [BR:
dfr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
124494570
Glycosaminoglycan binding proteins [BR:
dfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124494570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
124494570
NCBI-ProteinID:
XP_046913717
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MMNSSQILYSSILLLFVIVFQSTTADSPIQPPPQYRKNCQCFASKCYCIGEVGEPGNPGI
VGFRGVQGQPGKIGPPGFKGNRGQFGLLGDIGDIGPKGIRGDMGVRGFDGQIGLAGSPGL
TGEMGPTGVDGCNGTDGMMGLPGPNGWPGLVGPPGIFGPRGPKGEPGDGGYNSFGTKGDA
GDAGRAGFPGISGRVGPIGLVGDVGSPGKRGPKGDPGDVGPAGSSGPESRAPKGLKGEKG
PAGDIVYLSIQKNKTIIPPSAQLKGDKGEKGEKGMKSLPGIQGRKGVMGLQGVKGIRGQK
GERGDEGPRGEPGNQGQTGIHGEKGQKGEPGLEGLVGFMGQKGDQGNQGLSGRVGPQGDP
GPKGKLIEVGVSLPGPQGIQGPPGESGFPGQFGPSGPIGSIGYPGSAGEPGPAGNDGLLG
KPGLSPIGDRGDDGLPGNSGNSGRVGFTGLQGIKGNKGEKGENVYGPRGEAGNDGLYGLP
GLPGIRGDNGATGDAGYPGQGVPKMGRPGENGLRGEPGDVGDDGLNGLPGIPGPKGEKGW
DCVSCPPALNGEKGESGEFGRDGFFGAPGFNGDSGLAGLKGSSGIAGLPGYSGEKGDLGS
DGIFGRKGPKGDPGEVISLGFVTIGDIGDPGQKGEAGESGIDGKTGASGLNGLFGLKGDQ
GEFGDPGIAGQSGPDGINGTPGVRGEKGTTVYGLPGLQGRIGEKGQKGMIGDYGFKGMKG
DSFYAPDPIVLQAFKGKQGPQGPRGDRGDAGIIGISGRDGKNGLPGMAGYKGDAGRNGIS
QAGPMGFKGYQGFAGDPGNRGKKGAKGLTGKPGLAGFPGEKGVMGDTGDDGEMGLPGLNG
RPGPKGFYGDIGPRGWVGFNGDAGDPGMAGPKGDDGRPGLSGLKGEKGSIGPTMAGSQGL
AGKPGRNGVDGEKGDIGDEGVAGAPGMFGPKGSIGDIGINGVMGEPGRHGKDGHRGLDGL
EGARGLPGLKGDPNFGLPGPNGVSGEHGHYGPKGIKGDTGDPGLSASFYSLPGEKGEIGD
PGDSGYPGPKGISLYDKGIKGEMGDNAPPGLKGPKGELGYPGILGYKGIKGEPGQIIRGT
KGVKGDHGDNGRIGLPGIEGPKGTIGERGDDGFIGPIGEQGSVGEYGRIGPVGRNGFPGL
PGLKGSKGESGPPGLKGEKGNRGLNGNPGLMGIAGARGEPGINSQMIKGDKGDPGPRGLP
GLKGMSGDSGYQGVAGLKGSIGDTGYLGLPGLDGLIGLKGIQGDQGLPGRVFNITVAQPP
NVIGDHGLPGLPGPAGKPGTFVVGEKGEIGHVGRTGLPGIPGAKGQTGPAAIPGISGIKG
TKGDQGLAGLVGRQGLVGLQGWRGNKGLSGLKGYKGEIGDSGFPGFSGQAGPMGDSGDSG
FAGRDGLQGIKGMKGYPGDLDRDKIVIMKGERGDFGDAGPQGISGRAGASGFKGYIGDKG
MVGMAGQPGQYGLKGIRGDPGFIGLSGLPGPVGDPGLQGEKGAKGTRIKTIGYYFTRHSQ
NIHDPPCPNNSTPMWTGYSLLYIMGNEKAHGQDLGSPGSCLRRFSTMPYMFCTINEVCNF
ASTNDYSYWLSTDEPMPMDMRPIRNDRIRNYIGKCSVCESTTQVIAIHSQNTMEPFCPGG
WQSLWTGYSFFMNTDSGGEGSGQTLSSPGSCLEQFRPNPFIECHGHGSCNLYSTANSYWL
SSIDHNDQFRIPESETFKAGDLTRKISRCRVCMRVI
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcttcacaaatattgtattcatcaatcctattattatttgtaattgttttt
caatcgaccactgccgattcaccaatacagccaccaccacagtatagaaagaattgccaa
tgttttgcatccaaatgttattgtattggagaagttggtgaaccggggaatcctggtatt
gttggttttcgcggcgttcaaggtcaaccaggaaaaattggcccgcccggttttaaagga
aatcgtggtcaattcgggttattaggtgatattggcgatataggaccaaaaggtattcgt
ggtgatatgggcgtacgtggatttgatggccaaatcggtttggctggttcgcctggtctt
acgggcgaaatgggcccaacaggtgtcgatggctgtaacggaactgatggaatgatgggc
cttccgggtccaaacggatggccgggacttgttggccctccaggtatttttggaccacga
ggtccaaagggtgaacctggtgatggtggatataactcatttggcactaaaggagatgcg
ggagacgcaggacgagctggtttccctggcatttccggtagagtgggtcccatcggtttg
gtgggtgatgttggatcacctggtaaaaggggtccaaaaggtgatccaggtgatgttggt
cctgccggttcatcaggaccagaaagtcgtgcaccaaaaggtctaaaaggagaaaaaggt
cccgcaggcgatattgtttacttatctatccaaaaaaacaaaaccatcataccacctagt
gctcaattaaaaggggataaaggcgaaaaaggtgaaaaaggaatgaaatcacttccgggt
atacaaggccgaaaaggagtaatgggtctacaaggagttaaaggaattcgaggccaaaaa
ggagaacgaggtgatgaaggaccacggggcgagccaggaaatcaaggacagaccggaatt
cacggagaaaaaggacagaaaggggaacctggtctcgaaggtttagtcggttttatggga
caaaaaggtgatcaaggaaatcaaggcctttccggaagagttggtcctcagggggatccg
ggaccaaaaggtaaactcatagaagttggtgtctcgttacctggcccccagggtatacaa
ggtccgccgggtgaaagtggttttccaggccaattcggtccttccggtccgattggttcc
atcggttacccaggaagtgctggcgagcccggtccagccggaaatgatgggttgttaggc
aagccaggacttagtcctatcggcgatcgcggtgatgacggtttacctggaaattccgga
aattctgggcgtgttggttttacgggacttcaaggaattaaaggcaataaaggtgaaaaa
ggcgaaaatgtctatggtccacgtggcgaagccggaaatgatggattgtatggattgcct
ggcctaccaggaattcggggtgataatggcgctacaggtgatgctggttatcctggacaa
ggtgtaccgaaaatgggcaggccaggtgaaaacggattgcgtggcgaacctggtgatgtc
ggcgatgatggattaaatggattacctggtatacctggacccaaaggtgaaaaaggctgg
gattgtgtttcatgtccaccggcattaaatggagaaaaaggagaatctggtgaatttggc
agagatggatttttcggggctcctggtttcaatggggattctggtttagccggtttaaaa
gggtcaagcggaatcgctgggttgcctggttattctggtgaaaaaggggatttgggtagc
gatggaatttttggcagaaaaggtcctaaaggtgatccaggtgaagtcatttctctgggc
tttgtaacaattggtgatattggggatcctggccaaaaaggcgaagctggagaatcggga
attgatggaaaaaccggcgcttctggtctgaacggtttgtttggattaaaaggagatcag
ggagaattcggggaccctggtattgcgggacaatctgggcccgatggtataaatggcacg
ccaggggttcgtggcgaaaaaggcacaactgtttatgggctacccggtttacaaggtcga
atcggagaaaaaggacagaaaggaatgattggtgattatggtttcaaaggcatgaaaggc
gattcattctatgcacccgatccaattgtattgcaagcattcaaaggaaagcaaggtcca
cagggtcccagaggcgatagaggtgatgcgggtataatcgggatatccggaagagatggt
aaaaatggcctgcccggaatggcgggctataaaggcgatgcgggtcgaaacggaatttca
caagctggtccaatgggattcaaaggttatcaaggtttcgccggggaccctggtaatcgc
ggaaaaaagggcgcaaaaggactaacaggaaaacctggtttggctggattccctggtgaa
aagggcgtgatgggtgatactggcgatgatggcgaaatggggttacctggattgaatggg
cgacctgggcccaaaggtttttacggcgatattggaccaagagggtgggtgggatttaat
ggcgacgcaggagaccctggaatggctggtccaaaaggagatgatggtcggcccggtctt
tcgggtttaaaaggagaaaaaggatcaattggcccaacgatggcaggaagtcaaggtttg
gccggtaaacctggtcgtaatggcgttgatggtgaaaaaggtgatatcggtgatgaagga
gttgccggagcaccaggaatgtttggtccaaaaggttccatcggtgatattggaataaat
ggcgtaatgggtgaacctgggcgccatggaaaagatggccatcgcgggctagacggtcta
gaaggagcaagaggattacccggcttaaaaggtgaccctaatttcggtcttcctggtccg
aatggtgtttcaggcgaacacggccattatggtccaaaaggcatcaaaggtgataccgga
gatccaggcttatcagcaagtttttattctcttcctggagagaaaggagaaattggggat
ccgggcgattctggctatcctggaccaaaaggaatatctttgtatgataaaggaatcaaa
ggggaaatgggcgacaatgctcctcctggattaaaaggtccgaaaggcgaattaggctat
cctggaattttgggttataaaggaataaaaggtgaacctggtcaaattatccgaggaaca
aaaggcgtcaaaggcgatcatggtgataatggaagaatcggtttaccaggaatcgaaggt
ccgaaaggaacgattggtgaacgcggagatgatggatttattgggccaattggagaacaa
ggatccgtcggtgaatacggtcgaattggcccggttggtagaaatggatttcctggtttg
ccaggattgaagggttctaagggagaaagcggaccacctggattaaaaggtgaaaaagga
aatcgcgggcttaatgggaacccgggcttaatgggaatcgctggtgctcgaggagaacca
ggaataaattcacaaatgattaaaggcgataaaggcgatccaggaccaagggggttacct
ggattaaaaggaatgagcggggattcaggttatcaaggtgttgcgggtttgaaaggatca
atcggtgacacaggatatttaggacttccgggacttgatggtcttattgggttgaaaggc
atacaaggcgatcaaggtttacctggaagagttttcaacattactgttgctcaaccacca
aacgtaattggagatcatggcctaccaggtttaccaggaccggctggaaaaccaggaaca
tttgttgttggtgaaaaaggcgaaattggacatgttggacggactggattgcctgggata
cctggtgctaaaggtcaaaccggcccagctgcgattcctggaatttctggcattaaagga
accaaaggggaccagggtttagcaggtttggttggaaggcaaggacttgttggacttcaa
ggttggagaggaaataaaggattatccggtttgaaaggctataaaggcgaaattggtgat
agtgggtttcctggatttagcggacaagcaggcccaatgggagatagtggagatagtggt
ttcgccggaagagatggtcttcaaggaatcaaaggaatgaaaggttatcctggtgattta
gatcgtgacaaaattgtaatcatgaaaggagagcgcggagattttggtgatgctggccca
cagggcatatccggtagagctggagcttccggttttaaaggatatatcggcgataaaggc
atggttggaatggctgggcaacctggccaatacggtctcaaaggaatcagaggcgatcca
ggattcattggtctaagcggattgccgggaccggtcggggaccctggtttacagggtgaa
aaaggagccaaaggcaccagaataaaaacgattggttattatttcactcgtcatagtcaa
aatattcatgatcctccttgtccaaataattcgacgccaatgtggaccggttattcactc
ctatacattatgggaaatgaaaaagctcacggccaagatttaggaagccctggcagttgt
cttcgtcgtttcagcacaatgccatacatgttctgcacgatcaatgaagtttgtaatttt
gcatcaaccaatgattatagttattggctaagtaccgatgaaccaatgccaatggatatg
cggccaattcgaaatgaccgtattcgaaattatattggaaaatgttcggtctgtgaatcc
actacacaagttattgctattcatagccaaaataccatggaaccattctgccccggtggt
tggcaaagtctttggactggttacagttttttcatgaataccgatagtggtggtgaaggc
agtggtcaaacattatcatcacctggatcatgtttggaacaatttcgaccaaatccattc
attgaatgtcatggacatggtagctgtaatctatatagtacagctaatagttattggtta
tcatctatcgatcataacgatcaatttaggatacctgaatcggaaacatttaaagctggt
gatttaaccagaaaaatttctcgttgtcgtgtttgtatgcgcgtaatctaa
DBGET
integrated database retrieval system
