Dermatophagoides farinae (American house dust mite): 124495100
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Entry
124495100 CDS
T08043
Symbol
PNPase
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124495100 (PNPase)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124495100 (PNPase)
03016 Transfer RNA biogenesis [BR:
dfr03016
]
124495100 (PNPase)
Enzymes [BR:
dfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
124495100 (PNPase)
Messenger RNA biogenesis [BR:
dfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
124495100 (PNPase)
Transfer RNA biogenesis [BR:
dfr03016
]
Prokaryotic type
tRNA degradation factors
124495100 (PNPase)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
Motif
Other DBs
NCBI-GeneID:
124495100
NCBI-ProteinID:
XP_046914382
LinkDB
All DBs
Position
3:complement(6630491..6632976)
Genome browser
AA seq
774 aa
AA seq
DB search
MFVMFHYRQQKHVWKILITSLIKQNCRQRWQNFSSSNRGHEVRFQFSNSRLLKISTGKLA
KLADGSAVCTIGDTNVMVTAVGISPTKVGGSAGFVPLTVDFRQKAAAAGRIPMHHLRRET
GISEKEILTSRIIDRSIRPLFPRGLVGETQIICNILSLDGQNDPDILAINAASAALAISD
IPWNGPIGAVRVALDQNYDVITNPTRKEMNDARMNLVLAVTETGNVLMMEAFANEPVLEQ
HLIKSISKAIRESKIIIQNIRQLQKEIGKPKRCVEEIPMPNEQHFQAIRMLAEQRILDVF
SNHSHDKFSRDQALKEISGQVMTTLNEEFADDTSQLLQDAFTTVIKQIYAQMVQKTGIRC
DGRTVDELRPIHCEVDLFRPVHGSALFQRGQTQVLCTTTIDSQDSTWRADNISALINGIK
EKNFMLHYEFPKYATNEIGRSGIVGRREIGHGALAERALRPIIPNDSPTTRDFTIRLLCE
VLESNGSSSMASVCAGSLALLDAGIDISAPASGVAIGLLKSPKIGNDENQEQEHIILTDI
SGLEDFFGEMDFKIAGTRKAFTALQMDCKLEEGISFKILYEAIQKSNQARSHILNIMNNV
IMEPRKKPKETMPMVERIQVPINLRSKFLGVGWSQAKKLMAETGVSISQDLEDIDKFNIF
SPNESAMNEAKELIEKILHEPNVPELEFGAIYQCKVVEINDNGIMVQLHPAMKPVFLHLS
QLDLRKVDHPSALDIDVGSQISVKYFGRDPVSGQIRISRKVLQALESQVKNFIK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcatgtttcattatagacaacagaaacatgtatggaaaattcttatcacatca
ttgatcaaacaaaattgtcgacaacgatggcaaaatttttcgtcttcgaatcgaggccat
gaagttcgattccaattcagtaatagtcgattattgaaaatttctaccggtaaattggcc
aaactagctgatggttcagctgtttgtacgatcggtgatacgaatgttatggttacagcg
gtgggaatatcaccaaccaaagttggtggatccgctggtttcgttccattgacagtggat
tttcgacaaaaagccgctgcagctggtcgaattccgatgcatcatttaagacgtgaaact
ggcatcagtgaaaaagaaatactaacatcacgaattattgaccgatcgattaggccattg
tttccacgtggattagttggtgaaactcaaattatttgtaatattttatcattagatggt
caaaatgatccagatattttggccatcaatgctgcatcagctgcattggccatttcagat
attccatggaatggtccgataggagctgtacgtgttgctttggatcaaaattatgatgtc
ataacaaatccaactagaaaagaaatgaatgatgcacgtatgaatcttgtattggctgtc
actgaaactggaaatgttcttatgatggaagcatttgccaatgaacctgtattggaacaa
catttaatcaaatcgatttcaaaagcaatacgagaatcaaaaattatcatacaaaatatt
cgtcaactacaaaaagaaataggaaaaccaaaacgctgtgtggaagagattccaatgcct
aatgagcaacatttccaagctataagaatgttggccgaacaacgaatattggatgtgttt
tccaatcattcacatgataaattttcacgtgatcaagcattaaaagaaatttcaggacaa
gttatgacaacattaaatgaagaattcgccgatgatacgtcacaattattgcaggatgct
tttactactgtgatcaaacagatatatgctcaaatggttcaaaaaaccggcatccgttgt
gatggacgtacggtggatgaacttcgacctattcattgtgaagttgatctttttcgacca
gttcatggatcggcattgtttcaacgtggacaaacccaagtgctttgtacgactacaata
gattcacaagattctacatggcgtgctgataacatctcggcattaattaatggaatcaaa
gaaaaaaattttatgcttcattatgaatttccaaaatatgctaccaacgaaataggtcga
tccggtatagttggaagacgtgaaattggtcatggagcattagctgaacgtgcattacgg
ccaatcattcctaatgattcgccaacaacacgtgattttaccattcgattactttgtgaa
gtactcgaatcaaatggttctagttcaatggcaagtgtatgtgccggtagtttagcatta
cttgatgctggtattgatatttctgcacctgcatcaggtgtagccattggccttctgaaa
tcaccgaaaattggaaacgatgaaaatcaagaacaagaacatattattcttacggatatc
agcggattagaagatttttttggtgaaatggatttcaaaattgccggcacaagaaaagca
ttcacggcattacaaatggattgtaaactagaagaaggtatatcattcaaaatactttat
gaagctatacaaaaatctaatcaagcacgaagtcatatattgaacataatgaataatgtc
ataatggaaccgagaaaaaaacccaaagaaacaatgccaatggttgaacggatacaggta
ccgattaatttacgttccaaatttcttggtgtcggttggtcacaagcgaaaaaattaatg
gccgaaactggtgtcagtatcagtcaagatttagaagatattgataaattcaatattttt
tcgccaaatgaatcggcaatgaatgaggcaaaagaattgattgaaaaaattcttcatgaa
cctaatgtaccggaattggaattcggtgccatctatcaatgtaaagttgtcgagatcaat
gataatggtattatggtacaattacatccggcaatgaaaccagtgtttctacatttatca
caattagaccttcgaaaagttgatcatccatctgcattagatattgatgttggtagccag
atttctgttaaatattttggtcgtgatccagtatctggccagatacgaatatcaagaaaa
gtgttacaagcacttgaatcacaagtgaagaattttattaaataa
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