Dermatophagoides farinae (American house dust mite): 124495117
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Entry
124495117 CDS
T08043
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03013
Nucleocytoplasmic transport
dfr03015
mRNA surveillance pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124495117
09122 Translation
03013 Nucleocytoplasmic transport
124495117
03015 mRNA surveillance pathway
124495117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124495117
03041 Spliceosome [BR:
dfr03041
]
124495117
03009 Ribosome biogenesis [BR:
dfr03009
]
124495117
03012 Translation factors [BR:
dfr03012
]
124495117
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124495117
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124495117
mRNA cycle factors
Stress granule specific factors
124495117
Spliceosome [BR:
dfr03041
]
Complex C
Other components
EJC/TREX
124495117
Ribosome biogenesis [BR:
dfr03009
]
Eukaryotic type
90S particles
Helicases
124495117
Translation factors [BR:
dfr03012
]
Eukaryotic type
Initiation factors
eIF-4
124495117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
Utp25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
124495117
NCBI-ProteinID:
XP_046914404
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSTTKKANPTMPDDLSNVEFETSEDIEVISSFDSMNLNEDLLRGIYAYGFEKPSAIQQRA
IRPIIKGRDVIAQAQSGTGKTATFSIGVLQSIDIQTRETQALILSPTRELALQIQKVILA
LGEFMNVQCHACIGGRTLGEDIRKLDYGQHVVAGTPGRVFDMIRRRNLRTRSIKLLVLDE
ADEMLNKGFKEQIYDVYRFLPPYTQVVLLSATLPHEILEITSKFMTDPIRILVKRDELTL
EGIKQFFVAVEHEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMKEANFTVSSMH
GDMPQKERDSIMKEFRQGKSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaacgaaaaaggcgaatccaacaatgccggatgatctttccaatgtagaattt
gaaaccagtgaagatatcgaagtgatttcgagttttgattcaatgaatctgaatgaagat
ttattgcgtggaatttatgcatacggttttgagaaaccatcagccatccaacaacgtgct
attcgaccgataatcaaaggccgtgatgtgattgcacaggcacagtctggtactggtaaa
acggctacattcagtattggtgtactgcaatcgattgacatacaaacacgtgaaacgcaa
gcattaattctcagtccaacacgagagcttgcattgcaaattcagaaagttattctggcg
ttgggtgaattcatgaatgtacaatgtcatgcttgtatcggtggacgaactttgggcgaa
gatattcgaaaattggattacggccaacatgttgttgcgggaacacctggtcgagtgttt
gatatgattcgacgacgtaatcttcgaactagatcaatcaaattattggtattggacgaa
gctgacgaaatgctcaacaaaggattcaaagaacaaatctatgatgtatatcgttttctt
ccgccatacacacaggttgtattactatcggctacattgccacatgaaatccttgaaatt
acatcgaaatttatgaccgatccgattcgtatcctggtcaaacgtgatgaattaacgttg
gaaggtataaaacaatttttcgttgcagtcgaacatgaagaatggaaattcgatacatta
tgcgatctatatgatacgttgaccataacacaggcagtcattttttgtaacactaaacgt
aaggtcgattggttgaccgaaaagatgaaggaagcaaattttaccgtatcatctatgcat
ggtgatatgccacaaaaagaacgtgattcaattatgaaagaatttcgtcaaggcaaaagt
cgtgtattgataaccacagatgtatgggcacgtggtatcgatgtacaacaagtatcatta
gtaatcaattatgatttgccaaataatcgtgaattatacattcatcgtattggtcgatct
ggtcgtttcggacgaaaaggtgtggccatcaattttgtcaaatcagatgatatccgtatt
ttacgtgatattgaacaatattattccacacaaatcgatgaaatgccaatgaatgtagcg
gatttaatttga
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