Dermatophagoides farinae (American house dust mite): 124495250
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Entry
124495250 CDS
T08043
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124495250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfr03021
]
124495250
Enzymes [BR:
dfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124495250
Transcription machinery [BR:
dfr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124495250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Rpr2
DOCK_C-D_N
Motif
Other DBs
NCBI-GeneID:
124495250
NCBI-ProteinID:
XP_046914544
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MAADLKTSKTIVDELCEQLESSTTKPSQKFINGTQWNDLKSEQTRTLQNLARAHIDSFNF
MINEGLQKGLQNLNPIGFELANGDRVVIQIMDCVVLHPTVPNKNEVKISSHHSLCTKIYP
SECRMVKTSYKGKVLLTMNWSLNGRVQDIIEDVIGDIPIMVKSNRCNLEKLTRSELIHRK
EDSEEFGGYFIMNGNEYLIRKLIAQRRNYPMAIIRPSWKDSGQFFSEHGVSIRCVRNDQI
GSNMVLHYLTNGTVKLRFFYNRQPIYLPLILVLKVLCDASDQFIYNELIKTRENDNFFQS
CIVNMLRLVQQEKLYTSKQIKKYIGERVRVRFEAPSWYTDEEITDNLFRECIAVHLNSNV
DKFNLLVFMTRKLFAFVQRECAEEKPDNPMFHEIYQSGHIYFTLLLERFQVFLSTIKQAI
ERQFQQSLRFRDASSFTLTTAMVRKALTSNYREITRPMEHLITTGYLRSKTGLGLMQSAG
MAVKAEKINFWRFLAHFRSVHRGQFFSEMKTTACRKLYPEAWGFLCPVHTPDGAPCGLLN
HFSELCQITNQQQSVRHLTSVLTGLGMEPLDSPIKPDSNYLNVLLDGRALGFVHENCVTK
IVNQLRMMKTTGKEKIPLTLEIGLVPHTDKPTQYPALYLFSTPSRMIRPVFNLLTQNIEF
IGTFEQCYMDICVTSSEMIPGVTTHQEIRETSFLSILARQIPYPDFNQSPRNMYSCQMAK
QTMGTASHTLRYRSDNKMYSILTPQSPLVRTSAYDHYALDNYPLGTNAVVAVISYTGYDM
EDAMILNKASVERGFQAGIIHKTEVIDLYELAGLRSTQQQELMLKFGYDQSVDVDEKYAG
MFDQDGLPFIGRLVCQDDPVCAYVDMVENRTKFHKYKSSEPAYIFDVKILSDGDETRIVR
VAISYLLRRSPIIGDKFANRHGQKGICSFLWPAEDMPFTESGIIPDILFNPHGFPSRMTI
GQMIETLAGKSASMHGLVHDCTPFTFSEDNLASDYYGKLLESYGFNYYGTEKMFSGVDGR
ELEAQIFIGVVYYIRLRHMVGDKYQVRSTGPIDQITHQPVKGRKRAGGIRFGEMERDSLL
AHGTTFLLQDRLFNNSDKTLVHMCKKCGSILSPYLFSTTTNKNNVNDGIDGEAIGDPEAE
MIQYWTCKLCDSAEHIVKIAIPFVLQYLVAELASVNIKVKFTAT
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgatttgaagacatcgaaaaccatagttgatgagctttgtgaacagcttgaa
tcttctacaactaagccaagtcagaaatttatcaatggtactcaatggaatgatctcaaa
agcgaacaaactcggactttacaaaatcttgcccgagctcatattgattcatttaatttc
atgataaatgaaggtcttcaaaagggcttacaaaatttgaatccgattggatttgaattg
gctaatggcgatagggtagttatacagattatggactgtgtagttttacatccaactgtg
ccgaataaaaatgaagtaaaaatatcatcacaccattccctttgtacaaaaatctatcca
tccgaatgtcgtatggtaaagacatcatataaaggcaaagttttattgacaatgaattgg
agcctaaacggtcgagttcaggacattattgaagatgttattggtgatattcccatcatg
gtcaaatctaatcgatgtaatctggaaaaattgactcgcagtgaactcattcatcgtaaa
gaggattcagaagagtttggtggctacttcataatgaatggcaatgaatatcttattcga
aaattgattgcacaacgtcgaaattacccaatggccatcatacgaccttcgtggaaagat
agcgggcaatttttttccgaacacggtgtatcgattcgatgtgtacgaaacgatcaaatt
ggctcaaatatggttcttcattatttgactaacggaacagtcaaattaagattcttctat
aatcgtcagccaatatacttgccattgattcttgtgctgaaagttctctgtgatgcatcc
gatcagttcatctataatgagctaatcaaaacacgtgaaaatgataatttttttcaatca
tgcattgttaacatgttacgtttggtacaacaggaaaaactatacacttctaaacaaatc
aaaaaatacattggcgaacgtgttcgtgttcgatttgaagctccaagctggtatacggac
gaagagattactgataatctattcagagaatgtattgccgttcatctaaattcaaatgtc
gataaatttaatctgttggtctttatgacacgaaaattatttgcctttgttcaacgcgaa
tgtgcggaagaaaaaccggataatccgatgtttcatgagatttatcaatctggtcatatc
tatttcacactattgttggaacgatttcaggtatttttaagtaccataaaacaagcgatc
gaacgccaatttcaacaatcgctacgatttcgagatgccagttccttcacgttgacgaca
gctatggtacgtaaagcgttgacatccaactatcgtgaaatcactcgaccaatggaacat
ttgattacgaccggatatcttcgttcgaaaactggcctaggactaatgcaatctgccggt
atggctgtcaaagctgaaaagattaatttttggcgttttcttgctcattttcgttctgta
catcggggtcaatttttcagtgaaatgaaaacaacagcctgtcggaaattatatccagaa
gcctggggtttcctatgtccagtacatacgcctgatggagctccatgcggccttttaaat
catttcagtgaactttgccaaataaccaatcaacaacagtcagttcgacatttgacttca
gttttaactggtcttggtatggaaccattagattctccaataaaacctgattcaaattat
ttaaacgttctcttggatggtcgagcactaggttttgttcacgaaaattgtgtcacaaaa
attgtcaatcaattacgaatgatgaagacgaccggtaaagaaaagattccgcttacattg
gaaataggattggttcctcatactgataaaccaacacaatatccagctttgtacctgttt
tcaactccgtcgcgtatgattcgtccagtgttcaatctgttaacacaaaacattgaattt
attggaacgttcgaacaatgctatatggacatctgtgttacaagttcagagatgataccc
ggtgttacaacacatcaagaaattcgcgaaacaagttttctaagcattcttgcccgacaa
attccgtatccagattttaatcaaagtccacgtaacatgtattcatgtcagatggcaaaa
caaacaatgggaacagcaagtcatacacttcgatatcgatcagataataagatgtattct
atacttactcctcaatcaccattggttcgaacatctgcatacgaccactatgcacttgat
aattacccgcttggaaccaatgctgttgttgctgttatctcatacactggatatgatatg
gaagacgctatgattttgaacaaagcttcagttgaacgagggtttcaggccggtattatt
cacaagacagaggtaatcgatctttatgaattggctgggcttcggtcaacacaacaacaa
gaactgatgcttaaattcggttatgatcaatcggtcgatgttgatgagaaatatgcggga
atgttcgatcaggatggattgccattcatcggaagattagtttgtcaagatgatccagtt
tgtgcgtacgtggacatggttgaaaataggaccaaatttcataaatacaaaagttccgag
cctgcatacatttttgacgtgaaaattttaagtgatggtgatgaaacacgaattgtccga
gtggccatatcatatttattacgacgatcaccgataattggtgacaaatttgccaatcgt
cacggtcagaaaggtatttgttcatttttatggcctgctgaggacatgccatttaccgag
agtggcatcatacctgacattctgttcaatccacatggcttcccttctcgtatgactatc
ggacaaatgatagaaacattggccggaaaatcagcttcgatgcatggcttagttcatgat
tgcactccgtttacattttccgaggataatcttgcttcggattattatggtaaattattg
gaaagttatggtttcaactattatggaacggaaaaaatgttcagtggagtagatgggcgt
gagctagaggctcaaatattcatcggtgtagtatactatattcgtctacgtcatatggtt
ggtgataaataccaggtacgatcaacaggaccaatcgatcaaatcacccatcaacctgta
aaagggcggaaacgagctggtggtattcgttttggtgagatggaacgagattctcttctt
gctcatggtacaacatttttacttcaagatagattgttcaataattctgacaaaactctg
gttcatatgtgcaaaaaatgtggctcgatattatcaccatatttgttttcgacaaccacc
aacaagaacaatgtcaatgatgggatagacggtgaagctattggtgatccggaagcagaa
atgattcaatattggacatgtaaactctgtgattcagctgaacatattgtcaaaatagcc
ataccgtttgttttacagtatctagttgccgaattggcatcggtgaatatcaaagtgaaa
ttcacggcaacttaa
DBGET
integrated database retrieval system
