KEGG   Dermatophagoides farinae (American house dust mite): 124496049
Entry
124496049         CDS       T08043                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
dfr  Dermatophagoides farinae (American house dust mite)
Pathway
dfr03018  RNA degradation
dfr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124496049
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124496049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dfr03019]
    124496049
   03041 Spliceosome [BR:dfr03041]
    124496049
Messenger RNA biogenesis [BR:dfr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124496049
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     124496049
Spliceosome [BR:dfr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    124496049
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 124496049
NCBI-ProteinID: XP_046915465
LinkDB
Position
Unknown
AA seq 141 aa
MLPLTLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPEVY
IRGVNIKYLRIPDEVIDMVREEESKHQRQSRGKIDTNKRPLLNRNSGGGGPSGRGNFGGS
GRNNQNRNPKSNQMSYKNRNK
NT seq 426 nt   +upstreamnt  +downstreamnt
atgttaccattgacattgttgcgtactgctcagaatcatccgatgttagttgagctaaaa
aatggtgaaacttataatggccatttggttagctgtgataattggatgaatatcaatcta
cgtgaagtgatctgtacatcacgtgatggtgatcgattttggcgtatgcctgaagtttat
atacgtggtgtaaatatcaaatatcttcgtatacctgatgaagtgatcgatatggttcgt
gaagaagaatctaaacatcaacgacaatcacgtggtaaaatcgatacaaataaacggcca
ttattgaatcgtaatagcggtggtggtggtccaagtggacgaggaaattttggtggaagt
ggacgaaataatcaaaatcgaaatccaaaatcaaatcaaatgtcgtataaaaatcgaaat
aaataa

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