Dermatophagoides farinae (American house dust mite): 124496066
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Entry
124496066 CDS
T08043
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124496066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfr03021
]
124496066
03036 Chromosome and associated proteins [BR:
dfr03036
]
124496066
Transcription machinery [BR:
dfr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124496066
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124496066
PBAF complex
124496066
GBAF(ncBAF) complex
124496066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
MUCL1
Motif
Other DBs
NCBI-GeneID:
124496066
NCBI-ProteinID:
XP_046915485
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
MANNIQFKKKDNNNGLNLKFFESSETIQLFDTIRQWLQKNCKKFVQIDPPTNKSLANLTC
QLLQFQEDSLGKNGSISTTSSGGGGVVGDSGGDSSTTTATTTGSGTTTTTETSSSTATTK
QQQLFQRLPYKCFIDFKSGGKLCRIFEFVFKFKTEQGWRRFDFQSQSRMDRNVEMFIGLY
KFLQTNQCLIEPHVYILPEVDKVLATKLRDIIKRYHAKCLESPNEATHIVYPTTVAATQH
TDSNGDEFVRIVMKRDRSLLVHCLGRPDSYDTWLNIDVDLEPENERDHNDTPYELSANWL
LDTDEYNEWMNEEDYEIDVDRNGKRIPKRSRFTIEELHNEEKRDKRSNSIQKSKRRRSPS
PQSDKKRSRGKGASARSPAPVTMTNSNKKKFKNEDDEDLTKDMDNPSPETHFQVVNLNRN
SISAGNRNQKDNESMPIKGGTIIDLDSNDYDQQDQQQSKHLNNNSSNNNATDGGGNGGKP
SSRSTSPSSNRNYHQQSNGTSGLVSINNHSSSNNFDKDDSQDDNVTEQANHIIIPSYASW
FDYNCIHAVERRALPEFFNGRNKSKTPEVYIAYRNFMIDTYRLNPTEYLTLTAVRRNIAG
DVCAIMRVHAFLEQWGLINYQVDVDARPTPMGPPSTSHFHVLVDTPSGLQPLNPPRGQVS
ASNSSSSSATQQMLNLPKENGVGLSSKKESENINGFGDNFGLKLDQYARKNSYFKSKAAA
NLSREWTEQETLLLLEALELYKDDWNKVCEHIGSRTQDECILHFLRLPIEDPYLEDTNNA
LGPLSYHPIPFSKSGNPIMSTVAFLASVVDPRIAASAAKAAMDEFAKLKDEIPPSLAEQH
SKNVDASSSSSAAESNNVRSDQKTTASDKTEKVSSEVEKDKDNRNKDEVSINGGDADQQV
IKQEAASEDSSASSTDNNNKKDKEDGKMDVDGQREESSSSQQSADKSSKESDVSSEQQQQ
TKDGQQQSEQLSSTDVTMADKNDTVNTKTKDKEKELTEKEKNVIKESQISVAAAAALGSA
AVKARHLAAIEERKIKSLVALLVETQMKKLEIKLKHFEELEAIMDREKETLEYQRQQLMQ
ERQQFHMEQIKAAENRARSQAQQMFYQQQQQQQQQQQQQQSQDNRLNQHLNITASGAAPP
TVIPPASQIPQPPPPSQTAQQIAPHMQIRPPPPQIPSTVQQQHPGMTPQQSHLPQPPSAT
NVPVGNNVVMAPSVGEIAIQQSQPQQPTISNPQTQHPSFLSTSHQQIGGSSMPQSQMTIP
QQKPQHPVSSTLQQQPNVAPPLSSITSVPQQQQQDSDLPQTLQTPSTTQPEMVISHPQTS
QQPVATIMPQQQQSSNNTPTATPAVPMNYPSLNANNANQVQNIPVHQQQQQQPPLSSTFV
EPQQQQQQRSQ
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaacattcaatttaagaaaaaagataataataatggattaaatttaaaattt
tttgaatcatctgaaactatacaattatttgatactatacgacaatggctacaaaagaat
tgtaaaaagtttgttcaaattgatccacctacgaataaaagtttggcaaatttaacctgt
caattattacaatttcaagaagatagtttaggcaaaaatggttccatttcaaccaccagt
agtggtggtggtggtgttgttggagattctggcggtgattcgtcgactacaacggcgact
actaccggtagtggaacaacaacaacaacggaaacatcatcatccacagctactacgaaa
cagcaacaattgtttcaaagattgccttataaatgttttatagattttaaatctggcggt
aaactttgtcgtatatttgaatttgtattcaaatttaaaactgaacaaggatggcgtcgt
tttgattttcaatcacaatctcgtatggatcgtaatgttgaaatgtttattggcctatat
aaatttttacaaacaaatcaatgtttaattgaaccacatgtgtacatcttacctgaagtg
gataaagtattggcaacaaaattacgtgatatcatcaaaagatatcatgcaaaatgtttg
gaatctccaaatgaagcaacacatattgtttatccaacaacagtggcagccactcaacat
acagatagtaatggtgatgaatttgttcgtatcgttatgaaacgtgatcgttcgcttctt
gttcattgtcttggtcgaccagatagctatgatacatggttgaatattgatgtcgattta
gaaccagaaaatgaacgtgaccacaatgatacaccatatgaattgtcagccaattggcta
ctcgatactgatgaatacaatgaatggatgaatgaagaagattatgaaattgatgttgat
cgtaatggaaaacgaataccgaaacgttctagatttacaatagaagaattacataatgaa
gaaaaacgagataaacgttccaattctatacaaaaaagtaaacgtcgtcgttcaccatca
ccacaatcggataagaaacgtagccgtggaaaaggagccagtgcacgtagtcctgcaccg
gttacaatgacaaattcaaataagaaaaaattcaaaaatgaagacgatgaagatctcacc
aaagatatggacaatccttcaccggaaactcattttcaagttgtcaatttaaatcgaaat
tctatttcagctggaaatcgtaatcaaaaagataatgaatcaatgccaatcaaaggtggt
acaattattgatttagattccaatgattatgatcaacaagatcaacaacaatcgaaacat
ttgaataataattcatcaaataataatgcaactgatggtggtggtaatggtggtaaacca
tcatcacgatcaacatcaccatcatcgaatcgtaattatcatcaacaatcgaatggaaca
tcgggtttagtttcaatcaataatcatagtagcagtaataactttgataaagatgatagc
caagatgataatgttactgaacaggctaatcatataatcataccgtcatatgcatcatgg
tttgattataattgtattcatgctgttgaacgtcgtgcattgcctgaattttttaatggt
cgtaataaatccaaaacaccagaagtatatattgcctatcgaaattttatgatcgacacc
tatcgtttgaatccaaccgaatatctaacattgacggctgtaagaagaaatattgccggt
gatgtttgtgctataatgcgtgttcatgcattcctcgaacaatggggtctaatcaattat
caggtggatgtagatgcaagaccaacaccgatgggaccaccatcaactagccattttcat
gtacttgtggatacaccatctggtttgcaaccattgaatccgcctcgtggtcaggtatca
gcttctaattcatcatcatcatcggccacacaacaaatgttgaatcttcctaaagagaat
ggtgttggattatcatcgaaaaaagaatctgaaaatatcaatggatttggcgataatttt
ggattgaaattagatcaatatgctcgaaagaattcctatttcaaaagtaaagctgcagcc
aatctatcgagagaatggacggaacaagaaacattattgttgcttgaagcactggaattg
tataaagatgattggaataaagtttgtgaacatattggttcacgtacacaagatgaatgt
attttacattttcttcgattacccattgaagatccatacttggaagatacaaacaatgct
ttgggccctctatcttatcatccaattccattttccaaatctggcaatcctattatgtcg
acagttgcatttttggcttccgttgttgatccaagaatagctgcatcagctgccaaagca
gcaatggatgaatttgctaaattaaaagatgaaataccaccatcattggccgaacagcat
agtaaaaatgttgatgcatcatcatcatcatcagctgctgaatcaaataacgttcgatca
gatcagaaaacaacagcctctgataaaacggaaaaagtgtcgtctgaagttgaaaaagat
aaagataatcgaaacaaagatgaagttagtattaatggcggtgatgcagatcaacaggtg
attaaacaggaagcggcatctgaagattcttctgcttcatcaactgataataataacaag
aaagataaagaagatggaaaaatggatgttgatggtcaacgagaagaatcttcatcatca
caacaatcggctgataaatcatctaaagaatctgatgtatcgagcgaacaacaacaacaa
actaaagatggtcaacaacaatctgaacaattatcatctacagatgtcactatggctgat
aaaaatgataccgttaatacaaaaactaaagacaaagaaaaggaattgacagaaaaagaa
aaaaatgtgataaaagaatcacaaatatcggttgccgctgctgctgcattaggttcggct
gctgttaaagctagacatttggctgcaatcgaagaaagaaaaattaaatcattggtcgct
ttattggtcgaaactcagatgaaaaaattggaaataaagctcaaacattttgaagaactt
gaagccattatggatcgtgagaaagaaacgctcgaatatcaacgacaacaattgatgcaa
gaaaggcaacaatttcatatggaacagataaaagcggcagagaatcgggcaagaagtcaa
gcacagcaaatgttttatcaacaacaacaacaacaacagcagcaacaacaacaacaacaa
tcacaagataataggctaaatcaacatttgaacataacagcttccggtgcagcaccacca
accgttatacctcctgcctctcaaattccacaaccaccgccaccatcacaaactgctcaa
caaatagcgccacatatgcagattcgaccaccaccaccacagataccatcaaccgtacaa
caacaacatccggggatgacaccacaacagtcacacctaccacaacccccttcggcgaca
aatgttcccgtcggtaacaatgtagtgatggctccatccgtgggagaaattgccattcaa
caatctcaaccacaacaaccaacaatttccaatccacaaacgcaacatccgtcgtttctt
tccacttctcatcaacaaataggaggatcatcaatgcctcaatcacaaatgaccataccg
cagcagaagccacaacatccggtgtcatccaccttacaacaacaacccaatgtagcacct
ccattatcatctattacttctgttccacaacaacaacaacaagattcagatctaccccaa
acgcttcaaacaccatcaaccacacagcctgaaatggttatttctcatcctcaaacatca
caacaaccagtagcaacgattatgccccaacaacaacaatctagtaataatacaccaacg
gctacaccagctgttcctatgaattatccatctttgaatgctaataatgcgaatcaagtg
caaaatattccggttcatcagcaacaacaacaacaaccaccactatcatcaacattcgta
gaaccgcaacagcagcagcagcaacgcagccaataa
DBGET
integrated database retrieval system
