Dermatophagoides farinae (American house dust mite): 124496241
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Entry
124496241 CDS
T08043
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfr03021
]
124496241
03036 Chromosome and associated proteins [BR:
dfr03036
]
124496241
Transcription machinery [BR:
dfr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124496241
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124496241
SLIK complex
124496241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Chromo
Helicase_C
CHD1-like_C
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
124496241
NCBI-ProteinID:
XP_046915699
LinkDB
All DBs
Position
Unknown
AA seq
1979 aa
AA seq
DB search
MDVDQLLMKETNQSTINSDGNKDISSKQQHARGANHNESMSDHRTADSSEHDDNDNDDDD
DDDSDESGSESSSHSSSGSSSTSSSSSGSSEDSSSHDSNDDEDQSDSDNKSSIKQQKINN
STINVSNVTAKFTTDENRLTDDKSNNHETINETTAPLVVGTQSQSVNSGCNKEDIQQILE
NFPDALRRSSRSRKEPDRFQAETYGDDSDNSDSKAKQKRRRKRKDSDDWKDRNRGGDFDD
DDDDDDDDDDDEDTESDDSDSDPEHRSSKRSKNLRRNRQRPHSNRRASQRATVATKKSFS
ESESDGSDDDDDDDHESNNRNRRNSCAGSSNRKKTSRRTTVNQTISYKEESDYTDSDDLI
ADTNTNDDGQNGTSQVIEFEEEEGEMIEKVLEHRMGRVGATGPKTASYQIDENGDPNGDC
IADSDEPKEMQFLIKWKGWSYIHCTWESRQSLEEQKARGVKKIELYLKRDEEIRIWKKTA
SPEDIDYYEGQEELNSQLRQLHLTVERIIAHQPPKIGVSETCHPEYLCKWEGLPYGECTW
EDGSLISKKFQPKVNEYYQREKSQNIPAKYCRVLKQRPKFVPMKLQPSYIGGRDQLKLRD
YQLDGLNWLAQSWCRDNSVILADEMGLGKTIQTISFLNCLYHQHQLFGPFLLVVPLSTLA
AWQKEFDIWSPSMNVVVYIGDATSRHMIREYEWYAQAGSQRIKFNVLLTTYEILMREKSL
LSLVPWAVIGVDEAHRLKNDESLLYKCLSTFDTNFRLLITGTPLQNSLRELWALLHFIMP
NRFDSWEFFESEHKDAYQKGFSKLHSQLQQYLLRRVKKDVEKSLPAKVEQILRVDMTSIQ
KQFYKWILTKNYKALTKGVKGSIASFTNIVMELKKCCNHASLVRPFDEYANLDPLQQLIR
GSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDLLGEYLSLRRFAYQRLDGSIRGEFRKQ
ALEHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKN
QVNIYRLVTKGSVEEDIIERAKRKMVLDHLVIQRMDTSGHTVMASSNSRATSLQDTNNSS
KTTPFNKEELSAILKFGAQELFKETENDNEEPQCDIDEILKRAETREDDDGPQTLGDELL
NSFKVASFNFNEEEDVQAVSSGINSGERNEKEWDEIIPESERIKFENDERHKEEMEMMIP
RCRNKSKMDRGNGNQSDSGDEYDPNAKNESGSEESDGDRPRRRGRPKSSYKELIKGFSEQ
EVRKFIKSYRKFPTPMNRLESIAIDAELQEKPLPDLQRLAVQLEESCRIAIKESESKDQS
NESAKKNNRGPSFKLGGVTVFAKGILATQKDLEPLAVMLPTNPEERKKWVLTGIKIKSAS
WDCPWTIEDDSRLLAGVYEYGLGSWEAIKMDPSYKLADKMLPDGELKPQPKQLQSRVEFL
LKVMHRHLASQQKVNNSESSQMNHVIVSKNKNTKNIKKKENSGGKLASPSPTQSSSMKKN
SSTGKIKRKSSTVAANGAVDNNNKKHKEKKKRKDKKRKKEKIKPSSSSTTTTSKKQNSSD
STTNNNNSSSSNSIHSVDELDAEVFIECKEKMRATKKALKALGKVEELSNSEHRERFYEY
VSLIGAHIDKCLQDYQQDSTKMREWRNNLWTFVSKFTVLPAKKLYKYYRKLKQSKQQVTS
SSSHHHDRHNRHHQSSSKLSMDKGLSMNQTGSSTTTNRVNESNHYYHSSNDRYDNRNPMN
RGGVDYRNFSNHQYSRTSGGQPPSSLTSSSTSSSLKRDYHGSSSNSNSGPIGGGPAVKFS
KHSYHDRRNDYDRNSSGGHHHIGTSWSSKHDGYRNNSGGGGGGVYNDSNRYYHHSSSPNK
NNTSTYNRSNDHQQRPYDQRSQRPLNILPMGYNRHLPPPPSSLGSGTTTSAYPSNGGTSL
NHHQQHHHFHNSAATSPSTLQSSWNSGSTPALLPTPPPPPPNSSSIQPPILSSPNSVQR
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaccaattgttaatgaaggaaacgaatcaaagcaccattaatagtgacggt
aacaaagacattagcagtaaacagcaacatgcacgtggtgcaaatcataatgaaagcatg
agtgatcaccgtacagctgattcatccgaacatgatgacaacgacaacgatgatgatgat
gatgatgatagtgatgaatcaggttccgaatcatctagccattcatcatcaggttcatct
tccacatcatcatcatcatctggatcatcggaagattcttcctcccacgattcaaacgat
gatgaagatcaatcggatagtgataataaatcatctataaagcaacaaaaaataaataac
agtacgataaacgtttcgaacgtcactgcaaaatttactactgatgaaaatcgccttaca
gatgataaatcaaataatcatgaaactattaatgaaactacagcgccactggtggtgggg
acacaatcacaatcggtaaattctggttgcaataaagaggatatacaacagattttggaa
aatttccctgatgcattacgaagatcatcacgatctcgtaaagaaccagatcgatttcaa
gcagaaacatatggtgatgattcggataatagtgattcaaaagcaaaacaaaaacgaaga
agaaaacgaaaagactctgatgattggaaagatcgtaatcgtggtggcgattttgatgat
gatgatgatgatgacgacgacgatgatgatgatgaggatactgaatcggatgattcggat
tccgatccagaacatcgatcatcaaaacgatcaaaaaatctacgaagaaatcgacaacgt
ccacattcgaatcgtcgtgctagccaacgggcaacggtagccaccaaaaagtccttttcc
gaatccgaaagtgatggcagtgatgatgatgatgatgatgatcatgaatcaaataatcga
aaccgtcgaaatagttgtgcgggcagtagtaaccggaaaaaaacatccagacgtactaca
gtaaatcagacgataagttataaagaagaatcggattatacagattccgatgacttgatt
gccgatactaatacaaatgatgatggccagaatggcacttcacaagtgattgagttcgaa
gaagaagaaggtgaaatgattgaaaaggtgcttgaacatcgaatgggacgtgtgggagcc
actggaccaaaaactgcttcttatcagatcgatgaaaatggtgatccgaatggtgattgt
attgcggattcagatgaaccaaaagaaatgcaatttctaatcaaatggaaaggctggtca
tacattcattgtacttgggaatcccggcaatcgttagaagaacaaaaagctcgtggtgtt
aaaaaaattgagctttacctgaaacgtgatgaagaaatcagaatatggaaaaagacggca
tcccctgaagacattgattactatgaaggtcaagaggagcttaattctcagcttcggcaa
ctacatttgactgtcgaacgaatcattgcccatcagccacctaaaattggtgtttctgaa
acttgtcaccctgaatacctatgtaaatgggaagggttgccatatggcgaatgtacctgg
gaagatgggtccttaatatcgaagaaatttcagcccaaagtcaatgaatattatcaacgc
gaaaaatcgcaaaacattccggccaaatattgtcgagttttgaaacaacgaccaaaattt
gtaccgatgaaattacaaccatcttatattggtggtcgtgatcagcttaaacttcgtgat
tatcaattggacgggctgaattggctagcacaatcttggtgtcgtgataattcggtaatt
ttagcagatgaaatgggccttggtaaaactattcaaaccatatcgtttctcaattgcctg
tatcatcaacatcaattgtttgggccattccttttggttgttcctttatcaacgttggct
gcatggcaaaaagaatttgatatttggtcaccatcgatgaatgtagtcgtttatattggc
gatgctaccagccgccatatgatacgtgaatatgaatggtatgctcaagccggttcacaa
cgtataaaattcaatgttttgctaactacgtatgagattttgatgcgtgaaaaatcacta
ctctcattggttccatgggccgtaattggcgttgatgaagcacatcgactaaagaatgat
gaatctcttctctacaaatgtttatcgaccttcgatacgaattttcgactgctgatcacc
ggtacgcctttacagaattcacttcgtgaattatgggcattattacattttatcatgccc
aatcgatttgattcatgggaatttttcgaatccgaacataaagatgcttatcaaaaaggt
tttagtaaattacattcacaattacaacaatatctgctgcgacgtgtgaaaaaagatgtg
gaaaaatcattgcctgccaaagtggaacaaattcttcgtgtagatatgacttctatacag
aaacaattttataaatggatattgaccaaaaactataaggccctaactaaaggtgtgaaa
ggatcgattgcaagctttactaacattgtgatggaattgaaaaaatgctgtaatcatgca
agcttggtacggccatttgatgaatacgctaatctggatccactgcagcaactaatacgt
ggaagtggtaaattattgcttttggataaattactctgtcgtttaaaagagaccggacat
agggtgttgatcttttcgcaaatggtacgaatgctagatcttttgggtgaatatttatca
cttagacgttttgcctatcaacgattggacggttcgattcgtggtgaattccgtaaacaa
gcactggaacatttcaatgctgaaggttcacaagatttttgctttcttctatcaactcgt
gccggtggtcttggaatcaatttggctactgccgatactgtgataattttcgattcagat
tggaatccacagaatgatcttcaggcacaagctcgtgcacatcgaatcggtcagaaaaat
caggtaaacatatacaggctggtcacaaaaggttcagtggaagaagatattatagaacgt
gctaaacgtaaaatggttctcgatcatctagtcatccaacgaatggacacatccggtcat
acagttatggcttcatccaatagtcgtgctacttcgcttcaagatacgaacaattcttca
aagacaacaccgttcaacaaagaggagttgagcgccattcttaaattcggtgctcaagag
ctatttaaagaaacggaaaatgataatgaagaacctcaatgtgatattgatgaaatcttg
aaacgtgctgaaactcgtgaagatgatgatggtccacaaacgcttggtgatgaattgttg
aattcatttaaagtcgcatcattcaatttcaatgaagaagaagacgtccaagcggtttca
tcgggcattaattctggtgaacggaatgaaaaagaatgggatgaaattattccagaatct
gaacgtattaaatttgaaaatgatgaacgccataaagaagagatggaaatgatgatacca
cgttgtcgtaataaatcaaaaatggatcgtggtaatggaaatcaatcagattcgggtgat
gaatacgatccaaatgctaagaatgaatctggttcagaagaatccgatggtgatcgaccg
cgacgacgtggacgaccaaaatcatcttataaagaattgattaaaggttttagtgaacaa
gaagtacgaaaatttataaaaagttatcgaaaatttcccacaccgatgaatcggctggaa
tcgattgcaatcgatgctgaattacaggagaaacctcttccagatctgcagcgattagcc
gtacaacttgaagaaagttgtaggatagcaatcaaagaatcagaatcaaaagatcagtca
aatgaatctgctaaaaagaacaatcgtggacctagctttaagcttggaggtgtaacagtg
tttgctaaaggcattttagccacacaaaaagatctggaaccattggccgtgatgttgccg
acgaatccggaagaaaggaaaaagtgggtgttgaccggaatcaaaatcaaatcggcaagt
tgggattgtccatggacaattgaagatgattcacgtttgttggctggtgtttatgaatat
ggtcttggtagttgggaagctatcaaaatggatcccagctataaattagcagataagatg
ctacctgatggagaattgaaacctcagcctaaacagctacaatctcgtgttgaattttta
ttgaaagtaatgcatcgtcatcttgcatcacaacaaaaagtgaacaattccgaatcgtct
caaatgaatcatgttattgtttcgaaaaataaaaacactaaaaacattaagaaaaaagag
aatagtggtggtaaattggcttcgccttcaccaacacaatcatcatccatgaaaaagaat
tcgtcgacgggaaaaattaaacgtaaatcatcaactgtggccgccaatggtgcagttgat
aataataataagaaacataaagaaaagaaaaaacgcaaagataagaaacgtaaaaaggaa
aaaataaaaccatcatcttcatcgactacaacaacatcgaaaaagcaaaactcatccgat
tcgaccacgaataataataatagtagttcgagtaattcgatccattcagtcgatgaactt
gatgccgaagtgtttatcgaatgtaaggaaaaaatgcgagccacgaaaaaagctttgaaa
gcattaggcaaagtagaagagctatccaattcggaacatcgtgaacgattctatgaatat
gtttcattgattggtgcacatattgacaaatgtctacaggattatcaacaagattcaacc
aaaatgcgtgaatggcgtaataatttatggacatttgtttcgaaatttactgtattgccg
gcgaaaaagttgtataaatattatagaaaattaaaacaatccaaacaacaagtgacatca
tcttcgagccatcatcatgatcgccataatcgtcatcatcaatcatcatcaaaattatca
atggataaaggattgtcgatgaatcaaactggatcatcgacaacaacaaatcgtgtgaac
gaatcgaatcattattatcattcatcaaatgatagatatgataatcgtaacccaatgaat
cgaggaggtgttgattatcgaaatttttcaaatcatcaatattctcgtactagtggtggg
caaccaccatcatctcttacgtcatcatcaacatcatccagtctgaaacgtgattatcat
ggatcatcatcaaattcaaatagcggacctattggtggtggtccggcagtcaaatttagt
aaacattcatatcatgatcgtcgtaatgattatgatagaaattctagtggtggccatcat
catatcggtacttcatggtcatcaaaacatgatggttatagaaacaatagtggtggcggt
ggtggtggtgtctacaatgattcgaatcgttattatcatcattcatcatcgcctaataaa
aataatacatcaacatataatcgttctaatgatcatcaacaacggccatatgatcaacgt
tcacaacgtccacttaatatattaccaatgggctataatcgtcatttaccacccccacca
tcatcacttggtagtggaacaacaactagtgcatatccatctaatggtggaacatcattg
aatcatcatcaacaacatcatcatttccataattctgccgcaacatcgccatcaacttta
caatcttcttggaattctggatctacacctgctttattgccaacaccgccgccgccgcca
ccaaattcatcgtcgatacagccgccaatattatcatcaccaaatagcgttcagcgttaa
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integrated database retrieval system
