Dermatophagoides farinae (American house dust mite): 124496845
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Entry
124496845 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin-like
KO
K23288
syndetin
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfr04131
]
124496845
Membrane trafficking [BR:
dfr04131
]
Protein recycling
Others
EARP complex
124496845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
COG2_C
Vps4_C
Sec8_N
Motif
Other DBs
NCBI-GeneID:
124496845
NCBI-ProteinID:
XP_046916363
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MEVGNKKLRSIFKQVQSSAKVLSTGDRPRLSSVSSPNSVCHDEDGGKPTIDLSTAIEYNY
CLINSYVQERCQRTLSPYEEMVKTFTSAEDEDGIIESIGSEFFLDPSQPADHQSPDCDEL
EFDRNNNDLLEQAKIMEKCVLSKLPPLSQADELLNYIELEKKKLTGQQTIVSKRLTEMIL
ANDGHFQSELARVRCIEQDLATAIHTCVDGRRAFRESKRNFTQTSMTIIDNHRLREAIIQ
IIDCLQAIKRLRETVERIDYMLQYEKNFSTAIDLLDKQMDILESLSEKYSCVAEMRDRLL
VAIQLVGDQMDAVLAKMCDRFCVRTYRQLVKAYSQIGKTESSLQQLQLHFVNTIHDKAFG
IVLGYVKLFSPDHHHHGHXESSFKRKPLAELCQHLNPESFLQCLIDMCRALWDVMYNYHQ
CLAFYQRQPSSLTKEEIDLAVKKLSHGALRVWSDVQHKVRILLTSVKFVHQQPGNHADLM
HSDAATNQPPGDDVDQITHHHHHQDQLLFSFEEFIKILSVSERMIEIGKQFCQLYQLCNH
HRNELLSPSASPTMELESTLYQQTRAYVQSYHQVSMFELKIFLENEIWTRCPIETTDEFE
LIANLQEFAFIKQRLLRMKIHEGQCSTGKKDKLTKASPSTLLLSPVASGTTRACYFVADD
LDADDDVLSLRVSVSPFDELITRDTIISQQTFDSDSDRDDDRCDIRPPNDSVSSSKMEIV
TTNTALNVVRLMGRYMNIMFLLRPISHDIIQALLELFDYYLYVVYHFFAKDALPVSWLVV
NQLSTPPPPPSSQSNRLQLNHKLSLFIKRINETLISNNGTFILKDDEIGSANCSPSKAAW
SMPKYPCPDLSEYVPIQLADRHYALGERIMAIQSMIFIGRQFYHLCPLLLEFLRPDDEQD
DDESSWSLNAETSKMTKDGFIKGIQFYHDKMWSSVASLQYQCLYAVVTKLLPYETIVQQM
QQTRWDLKEIPSIHSPYVNVIVEQLNRFDAAYGQLLHSHDLTFLTASLIEDDHVDGDDDD
GDGDDDDEDGNIMPLTKLEWLSRRIPITLWECLLRALNRTFIEGFSTVRKCTNEGRALMQ
LDYEQFLSHMEKLMTPCYYYYYYTNQQTAKSSLKSYLANERLQVEEYIKAFYITESTFAD
WIRQKSNVYTGKQIVSLITCIAGDNKKLQSSLLSVIDASSLEHSQSAPVTNE
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaagttggaaacaaaaagctcagatcaattttcaaacaagtgcaaagttcggccaaa
gttttatcgacgggagatcgcccacgattatccagtgtttcatctccgaatagcgtatgc
catgatgaagatggtggcaagccaacgattgatttatcaacggcaatcgaatacaattac
tgtttgatcaattcgtatgtgcaagaacggtgccaacgtactttgtctccatacgaagag
atggtcaaaacattcaccagtgccgaggatgaagatggcatcattgaatcaatcggctca
gagttttttcttgatccaagtcaaccagctgaccatcagtcaccggactgtgatgagttg
gaattcgataggaacaataacgatttgttggaacaggccaaaataatggaaaagtgtgtt
ctttcgaaattgcctccactgagccaggccgatgaattgctcaactacattgaactagag
aaaaagaaacttactggtcaacagacgatcgtgtcgaaacgattgactgagatgatactg
gccaacgatggtcactttcaatcggaattggcacgtgtccgatgcatcgaacaggatttg
gcaacagccatacacacctgtgtggatggccgtcgagcttttagagaatcgaaacgaaat
tttacccaaaccagcatgaccatcatcgataaccatcgactacgtgaagcaatcattcag
atcatcgattgtctgcaagcgatcaaacgactgagagagacggtcgaacgcatcgattat
atgctccagtacgaaaagaacttttccacggccatcgatttgttagacaaacagatggac
attctcgaatcactttccgaaaagtatagttgtgtggccgaaatgcgagatcgactgctg
gtggccattcagttggtgggcgatcagatggacgccgtgttggccaagatgtgcgatcga
ttctgtgtccgaacctatcgacaactggtcaaagcatattctcagattggcaaaacagaa
tcatcgctgcagcagttacaactccattttgtcaacaccatccacgacaaagcgttcggc
attgttctcggttacgtcaaactcttttcgcccgatcatcatcatcacggccacnnagaa
tctagcttcaaacgcaaaccgttggccgaactgtgtcagcatctgaatcctgaatcgttc
ctacagtgtttgattgacatgtgtcgtgctctttgggatgtcatgtacaactatcaccaa
tgtcttgcattctatcaacgtcagccatcgagcttgaccaaagaggaaattgatttggca
gtcaagaagctttcacatggggcactgcgagtttggtcagacgttcagcacaaagttcgg
attcttctcaccagtgtcaagtttgtccaccaacaaccgggcaaccatgccgatttgatg
cattctgatgcagcaactaaccagccaccgggcgatgatgttgatcagattactcaccac
caccaccaccaggatcaactgctgtttagtttcgaagaattcatcaagatattgagcgtg
tctgagcgaatgattgagattggcaagcagttttgtcagctttaccaactttgcaatcat
catcggaatgaattgttgtcaccatcagccagtccaaccatggaattggaaagcacgctt
tatcagcagactagagcctatgttcaatcctatcatcaggtgtccatgttcgagttgaag
attttcctcgagaatgagatatggacccgttgtccaatcgaaacgaccgatgaatttgaa
ctgattgccaacctgcaggaatttgcattcatcaagcaacgattactgcgaatgaaaatt
cacgaaggacaatgttcaaccgggaaaaaagacaaactgaccaaagccagtccgtccaca
ttgctgctgtcgcccgttgcttctggcacgaccagagcatgctactttgtcgcggacgat
ttggacgctgatgatgatgttttatcgctgcgggtatcggtgtcgcctttcgatgaactc
attacccgtgatacaatcatttctcagcagacattcgactctgattccgacagagatgat
gatcgatgtgacattcgaccaccgaacgattccgtgtcaagctccaagatggagattgtg
accaccaacacggctttgaatgtggttcgattgatgggccgttacatgaacataatgttt
ctgttgcggccaatttcacatgatatcatacaagcgttactcgaactatttgattattat
ttgtacgtggtttatcacttttttgccaaagatgcattaccggtgtcgtggcttgttgtg
aatcagctgagcacaccaccaccaccaccatcatcacaatcgaatcgattgcagctcaat
cacaaattgtctttgttcatcaaacgcattaatgagactttgatttcgaataatgggact
tttatcctgaaagacgacgagattggatcggcaaattgctctccttcgaaggctgcttgg
tcaatgcccaaatatccatgtcctgatctttcagaatatgttcctattcaattggccgat
cgacactatgctcttggtgaacgtattatggccatccagtccatgattttcataggccgt
caattttatcacctttgtccgttgctgttggagtttttacgacccgacgatgaacaagat
gatgatgaatcatcctggagtctgaatgctgaaacgtcgaaaatgacaaaggacggattc
atcaagggtattcaattctaccacgacaagatgtggtcgagtgtggcaagtttgcagtat
cagtgtttatacgccgtggtcaccaaattattgccttacgagacgatcgtacaacagatg
caacaaactcgttgggatctgaaagagataccatccatacattcgccatatgtcaacgtt
attgttgagcaattgaatcgcttcgatgctgcctatggccaattgctgcattcacatgac
ctgacctttcttacggccagtttgatcgaagatgaccacgtcgatggtgatgatgatgat
ggtgatggtgatgatgatgatgaagatggaaacattatgccgttgaccaaacttgaatgg
ttgtctagacgaattccaataactctttgggaatgcctgttgcgtgccttgaatcgaacg
ttcatcgagggattctcaactgttcgcaaatgcacaaacgaaggtcgagctttaatgcaa
ttggattacgaacaatttctgtcgcatatggaaaaactgatgacaccctgctactattac
tattactacacgaaccaacaaactgccaaaagcagcctgaaaagctatctggccaacgaa
cgtcttcaagtggaagaatacatcaaagcattctacattaccgagtctacattcgccgat
tggatccgtcagaagtcaaacgtctacactggaaagcagattgtatcgctcatcacttgt
attgctggcgataacaaaaagctacaaagttccttgttgtccgttatcgatgcctcatcg
ttggaacattcacaatcagcaccagtgacgaatgagtga
DBGET
integrated database retrieval system
