Dermatophagoides farinae (American house dust mite): 124496944
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Entry
124496944 CDS
T08043
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase 25E
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03013
Nucleocytoplasmic transport
dfr03015
mRNA surveillance pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124496944 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
124496944 (Hel25E)
03015 mRNA surveillance pathway
124496944 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124496944 (Hel25E)
03041 Spliceosome [BR:
dfr03041
]
124496944 (Hel25E)
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124496944 (Hel25E)
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124496944 (Hel25E)
Spliceosome [BR:
dfr03041
]
Complex C
Other components
EJC/TREX
124496944 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124496944 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
Dark_CARD
Motif
Other DBs
NCBI-GeneID:
124496944
NCBI-ProteinID:
XP_046916476
LinkDB
All DBs
Position
7:2589639..2593000
Genome browser
AA seq
430 aa
AA seq
DB search
MADNDNDLLDYEEDEEQAPIGGDLSNNQTNNNGTVNDTKKAGYVSIHSSGFRDFLLKPEL
LRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDPVDGQISV
LVMCHTRELAFQISKEYERFSKYMPSIRVAVFFGGLTITNDEKVLRMNPPHIVVGTPGRI
LALIRNKKLNLKNIKHFILDECDKMLEQLDMRRDVQEIFKATPHEKQVMMFSATLSKEIR
PVCKKFMQDPMEVYVDETKLTLHGLQQYYVKLKDSEKNRKLFQILDDLEFNQVVIFVKSV
QRCVALANLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVN
IVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDESDAKVLNSVQDRFDVSIPEMPAD
IDVSTYFEDK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgataatgatttgttagattatgaggaagatgaagaacaggcaccgatt
ggtggtgatctttccaataatcaaacaaacaataatggtacagtcaatgacacgaaaaaa
gctggttatgtttccattcattctagtggttttcgtgatttcctattgaaacccgaatta
ttacgtgctatcgttgattgtggttttgaacatcccagtgaggtccaacatgaatgtatt
ccacaagctatccttggtatggatattctttgtcaggcaaaatctggtatgggtaaaacg
gccgtttttgttttggccacattacaacaattggatccagtcgatggacaaatatccgta
ttggtcatgtgtcatacacgtgaattggcgtttcaaatatccaaagaatatgaacgtttc
tccaaatatatgcctagcatacgtgtggcagttttcttcggcggtctcaccattaccaat
gatgaaaaagttctacgaatgaatccaccacatatcgttgttggtacacctggtcgaatt
ttggcattgattcgtaacaaaaagttgaatctaaaaaatatcaaacattttattctagat
gaatgcgataaaatgcttgaacaacttgatatgcgacgagatgttcaagaaatcttcaaa
gctacacctcatgagaaacaagtcatgatgtttagtgctacattgtcaaaggaaattcga
ccagtttgcaaaaaatttatgcaagatcctatggaagtatacgtggatgaaacaaaactt
acattgcatggcctacaacaatattacgtcaaacttaaagattcggaaaagaatcgaaaa
ttgtttcaaattcttgatgatttagaattcaatcaggtggtaattttcgtcaaaagtgta
caacgatgtgttgctttggcgaatttattggtcgaacagaatttcccagctattgccatt
caccgtgctatgacacaagaggaacgtttatcccgttatcaacaatttaaagatttccaa
aaacgtatattggtcgccacaaatttatttggtcgtggtatggatattgaacgtgtcaat
atcgtattcaattacgatatgcccgaagatagtgacacttatctacatcgtgttgcacgt
gccggtcgttttggaactaaaggtttagctataacgtttgtgagcgacgaaagcgatgcc
aaagtgttgaatagtgttcaagatcgttttgatgtttcaattccagaaatgcctgccgat
attgacgtttctacttatttcgaagacaaatga
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