Dermatophagoides farinae (American house dust mite): 124497234
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Entry
124497234 CDS
T08043
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124497234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124497234
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124497234
Spliceosome [BR:
dfr03041
]
Complex A
U2 snRNP components
U2 related factors
124497234
Complex B
124497234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
Motif
Other DBs
NCBI-GeneID:
124497234
NCBI-ProteinID:
XP_046916818
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MGRHWDSKRSRSRSPSRSTLSSSFRSSSYRDRDYKNRSSSSSSSSHRTESSKSSSSSRRD
KDHHSSSSRHRSRSRSWSRSPERRDHHRSRSPSYHKSKRLSKSPERVNRERVEDIIGQDV
NYKNFDMDEQQKRLEKIMQERRERIEKWRQQQKLGESLQNNNTNETSTVNQKNDNGAAAN
AATVSNEIKKEDEPKKTWTLDDENDDDDDDDDNDVDNANETIEVDEENFHTPTVTKVEIE
DKIEEVAKVDNKEAKSVTNEDETISTSTEKMETEQQQTTEQSEEKQKQNNDDEDDDIDPL
DAYMQGIQEEVKKYRQQTVHANKRNDKVTVVVGVAKKKSIKKKGELIEQNQDAMEYSSSD
EIGQNDELANAMDNLQAKVKQKKLMTISKEDITYVKFRKNFYIEVPEITKMTNEEVDAYK
TKMEGIKTKGKGCPRPIKSWAQCGVSKKVLEVLKRNNYEKPTPIQCQAIPAIMSGRDLIG
IAKTGSGKTLAFLLPMFRHIMDQPPLESGDGPISVIMTPTRELATQIYSECRKFAKPLGL
RVVAVYGGTPISEQIGDLKPGAEIVVCTPGRMIDMLAANNGRVTNLRRCTYVVLDEADRM
FDMGFEPQVMRIIDGIRPDRQTVMFSATFPRIMEALARRILDKPIEVQVGGRSVVCKEVQ
QEIIVIDDDDKFLKLLEILGKYSNEGSAIVFVDKQEHADMLLKELMHASYTCLALHGGID
QNDRDSTIADFKNGRVNVLVATSVAARGLDVKHCIVVINYDCPNHYEDYVHRCGRTGRAG
NKGYAYTFITPEQGRYSNDLIKALTSSGNMIPESLQKLFDDYKREQELMGKKVKSSSGFT
GKGFKFDEAEAMQAVEKKKFQKAALGLQDSDDEDPEEDIDQEIENMLAPKKKTIIQPLIP
TGEKTLSEKLELAKQLASKISMTKTPAVNPIVTNKPSATAHTEAILKGDAFSLGDIASTV
TAKSIAEQRAELINAKLNYTPKDFEYNDDGEIIKRDDDDLFAQTLTQRYEEELEINDFPQ
QARWRVTSKEAIAMISEYSEAGITVRGTYFPTGKEPKVELGERKLYLAIEGMNERAVSKA
KSEIIRLIKEELIKLNNTSYLNKSRYRVV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacattgggatagtaaacgttccagaagccgatcaccatcaagatctacatta
tcatcttcgtttcgatcatcaagttatcgtgatcgtgattataaaaatcgttcatcatca
tcatcatcatcatcacatcgtacagaatcatcgaaatcatcatcatcatcgcgtagagat
aaagaccatcattcatcatcatctcgtcatcgttctagatctcgttcatggtctcgatca
ccggaacgccgtgatcatcatcgttctagatcaccatcttatcataaatcaaaacgttta
tccaaatcacctgaacgtgttaaccgggaacgtgttgaagatattattggtcaagatgta
aattataaaaatttcgatatggatgaacaacagaaacgtttggaaaagattatgcaagaa
cgtcgtgaacgtatagaaaaatggcgtcaacaacagaaacttggtgaatcattacaaaat
aataatacaaatgaaacttccactgttaatcaaaaaaatgataatggtgccgctgctaac
gctgctactgtttccaatgaaatcaaaaaagaagatgaaccaaaaaagacatggacatta
gatgatgaaaatgatgatgatgacgatgacgacgataatgatgttgataatgccaatgaa
accattgaagttgatgaggaaaattttcacactcctacagtaacaaaagttgaaattgaa
gataaaattgaggaagttgcaaaagttgataataaagaagcaaaatctgtaacgaatgaa
gatgaaaccatttcaacatcgacagaaaaaatggaaacagaacaacaacaaacaacggaa
caatcggaagaaaaacaaaaacaaaataatgatgatgaagatgatgatattgatccatta
gatgcttatatgcaaggtattcaagaagaagtgaaaaaatatcgacaacaaactgttcat
gctaacaaacgaaatgataaagttaccgttgttgttggtgtagccaagaaaaaatccata
aaaaagaaaggtgaattaattgaacaaaatcaagatgcaatggaatattcatctagtgat
gaaattggccaaaatgatgaattagcaaatgcaatggataatttacaagcaaaagttaaa
caaaaaaaattgatgaccatttcaaaagaagatattacatatgttaaatttcgtaaaaat
ttctacatagaagtacctgaaatcactaaaatgaccaatgaagaagttgatgcatataag
acaaaaatggaaggaataaaaaccaaaggtaaaggttgtccaagaccaataaaatcatgg
gcacaatgtggtgtaagtaaaaaagtattggaagttttgaaacgaaacaattatgaaaaa
ccaactccaattcaatgtcaagcaataccggccataatgtctggacgtgatctgattggc
atagcaaaaactggttcaggcaaaacattggcatttttattgccaatgtttcgacatata
atggatcaaccaccattggaatctggtgatggtccaatatccgtgattatgacaccaaca
cgtgaattggccactcaaatctattcggaatgtcggaaatttgccaaaccacttggtttg
agagtggtagccgtatatggtggtacaccgatttccgaacaaattggtgacctaaaacct
ggtgccgaaattgttgtctgtactcctggtcgaatgatcgatatgttggcagcaaataat
ggtcgcgtcacaaatcttcgtcgatgtacgtatgttgtattggatgaagctgatcgaatg
tttgacatgggatttgaaccacaagttatgcgaattatcgatggaattcgaccggatcga
caaacagtcatgttttcggcaacatttccgcgaataatggaagcacttgcacgtagaata
ttggataaaccgattgaagttcaagtcggtggtagatctgtagtgtgtaaagaagttcaa
caagaaattattgttatcgatgatgatgacaaatttttgaaattgctagaaattctggga
aaatattcgaatgaaggcagtgctattgttttcgtcgacaaacaagaacatgcagatatg
ttattgaaagaattaatgcatgcatcatatacttgtttagcattacatggtggtatcgat
caaaatgatcgtgattctacaattgctgattttaaaaatggacgtgtcaatgttttagtt
gcaacatctgtagcagcacgtggtttagatgttaaacattgtattgtggtgattaattat
gattgtccaaatcattatgaagattatgtacatcgatgtggtcgtactggtcgtgctgga
aacaaaggttatgcttatacatttataacacctgaacagggtcgttattcaaatgattta
ataaaagcattaacatcaagtggaaatatgataccggaaagtttacaaaaattatttgat
gattataaacgtgaacaagaattgatgggtaaaaaagtaaaatcatcatctggtttcact
ggtaaaggtttcaaattcgatgaagctgaagcaatgcaagcagtggagaagaaaaaattt
caaaaagcagcactcggccttcaagattctgatgacgaagatccagaagaagatattgat
caagaaattgaaaatatgttggcaccaaaaaagaagacaatcatacagccattaatacct
actggtgagaaaacattatcggaaaaattagaattagccaaacaattggcatcgaaaata
tcaatgacaaaaacaccggctgtaaatccaattgtaacgaataaaccatcagcaacggca
catacagaagcaatacttaaaggtgatgcattttcattgggagatattgctagcactgta
actgctaaatctattgctgaacaacgtgccgaacttatcaatgctaaactaaattataca
ccaaaagattttgaatataatgatgatggtgaaattatcaaacgagatgatgatgattta
tttgcacaaacattgacacaacgttatgaagaagaattagagattaatgattttccacaa
caagctagatggcgtgtaactagtaaagaagctatcgctatgattagtgaatattctgaa
gccggtatcactgttcgtggtacttattttccaactggtaaagaacctaaagttgaattg
ggtgaacgaaaattatatctggccattgaaggtatgaatgaacgtgctgtaagcaaagct
aaaagtgaaattattcgtctaatcaaagaagaattaatcaaattgaataatacatcatat
ttgaataaaagccgatatcgtgttgtttga
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integrated database retrieval system
