Dermatophagoides farinae (American house dust mite): 124497525
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Entry
124497525 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124497525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124497525
03009 Ribosome biogenesis [BR:
dfr03009
]
124497525
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124497525
Spliceosome [BR:
dfr03041
]
Complex A
U1 snRNP components
U1 related factors
124497525
Complex B
124497525
Ribosome biogenesis [BR:
dfr03009
]
Eukaryotic type
Pre-60S particles
Helicases
124497525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
124497525
NCBI-ProteinID:
XP_046917143
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MERFCKEHGLVFENPDDFRDPILDYQNDNRLPSKLSNKLAELNYRKPTPIQAVAIPIILE
KRDFIGKAETGSGKTLAFVVPATIFMMNNADDLXQKSSGCYPKVMVISPTRELAIQTNEV
FESIGLFKSLCVYGGASRMMQYNDLRSKRPQVIVGTPGRINDFLEASAIHLSKCTYLVLD
EADRMFDMGFYPQIKKIIDLCPEISERQTLLFSATWVEKVQELADPLLNSNRSLVSIGPL
YGLKACVDIKQHLFRCREFEKKILLQEIIREFDGFKILVFASTKLRSQSVCDEMNDLNIA
RCDYIHGDVAQERRERLIQNFNHGKIMIIFATDVASRGLDIKDIEVVVNYDFPVDVETYV
HRIGRCGRNGAKGLAFTFITERFFENQYSHKKLIKVVENSGNTIPENLQL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtttttgtaaagaacatggtcttgtttttgaaaatcctgatgattttcgtgat
ccaattctcgattatcaaaatgataatcgtttaccatcaaaattgtcgaataaattggcc
gaacttaattatcgaaaaccgacaccaatacaagcggtagccataccgattattttggaa
aaacgtgattttattggtaaagcagaaactggctcaggaaaaacattggcattcgtagta
ccagcaacaatttttatgatgaataatgctgatgatcttngacaaaaatcttctggttgt
tatccaaaagtgatggtcatatcaccaacacgtgaattggccatacaaacaaatgaggta
ttcgaatcaattggtttattcaaatcactctgtgtttatggtggtgcatcacgtatgatg
caatataacgatttacgatcaaaacgaccacaggttattgttggtacaccgggacgtatc
aatgattttcttgaagcttccgccattcatttgtcaaaatgtacttatttagttttggat
gaagctgatcgtatgtttgatatgggtttttatccacaaatcaaaaaaattatcgatctt
tgtccagaaatttctgaacgacaaacattattgttttcagctacatgggtggaaaaagta
caagaattggctgatccattattgaattcgaatcgttcattagtttcgattggtccattg
tatggcctaaaagcttgtgtcgatattaaacaacatctatttcgttgtcgtgaatttgaa
aagaaaatattattacaagaaataatccgtgaatttgatggctttaaaattttggtattt
gcatcgacaaaattacgttcacaatcggtgtgtgatgaaatgaacgatttgaatatcgcc
agatgtgattacatacatggcgatgttgcacaagaacgacgtgaacgtcttattcaaaat
tttaatcatggcaaaataatgatcatatttgccactgatgttgcatcacgtggtttagat
attaaagacattgaagtggtggtcaattatgattttcctgtggacgtagaaacctatgtt
catcgtattggacgttgtggccgtaatggtgccaaaggtttggcatttacatttattact
gaaagattttttgaaaatcaatattcacataaaaaattgataaaagttgtcgaaaattct
ggtaatacaataccagaaaatttacaattgtaa
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