Dermatophagoides farinae (American house dust mite): 124497605
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Entry
124497605 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124497605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124497605
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124497605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
124497605
NCBI-ProteinID:
XP_046917227
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MLSSIVSSSQQSNQSVAMMNAVNAHVSQLSLNPGQNTGTGGVPVSTVVTSNNTTGVASSG
STPASSGLNTPLTIIPTIVTGGNIQSSNETDRILQLIGDLLNFETREHALMELSRKRENV
EDLAVLLWNSFGAIAALLQEIISVYPTIHPPTLNAHQSNRVCNALALLQCVASHSQTRGA
FLQANIPLYLYPFLNMNTPSKTRPFEYLRLTSLGVIGALVKTDEXEVINFLLKTEIIPLC
LRIMESGTELSKTVATFILQKILLDETGLNYICQTYDRFSHVAMILGKMVLALAKDQSAR
LLKHVIRCYLRLSDNPRAREALRHCLPDHLKSNTFANCLNNDRGTKSWLHQLLKNIEKDP
QQQQQQSMGGGPNPVVVGQSASPGAIQQAGNNAANIMLAAAAAAAGGGGCNVPVSAGQMM
NTPSKSNKM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatcaattgtttcatcatcacaacaatcgaatcaatcggttgcaatgatgaat
gctgttaatgcacatgtatcacaattatcattgaatcctggtcaaaatactggcactggt
ggtgttcctgtttcaacagtggttacatctaacaatacaactggtgttgcatcatctgga
tcgacaccggcatcttccggcttgaatacaccattgacaataattcctactattgttacc
ggtggtaatatacaatcatcaaatgaaactgatcgtatattacaattaattggtgatcta
cttaattttgaaacacgagaacatgcattaatggaattgtctcgtaaacgtgaaaatgtt
gaagatttggccgttcttttgtggaattcatttggtgccattgctgcactgttgcaggaa
atcatttccgtttatccaacaattcatccaccaacattgaatgcacatcaatcaaatcgt
gtttgtaatgctcttgcattgcttcaatgtgttgcatcacattcacaaacacgtggagct
tttcttcaggctaatattccgctatatttgtatccattcctcaatatgaatacaccatcg
aaaacacgtccatttgaatatctacggctaacatcattgggcgttatcggtgcattagtg
aaaaccgatgaanaagaggtgattaattttttgcttaaaactgaaatcataccattatgt
ttacgtatcatggaatcgggaacagaattatcgaaaacagtggcaacatttattttgcag
aaaattcttctggatgaaactggtttgaattacatttgtcaaacatatgatcgtttttca
catgttgccatgattcttggtaaaatggttttggcattagctaaagatcaatcggcacgt
ttattgaaacatgtcattcgttgttatcttcgtttatcggataatccacgtgcacgtgaa
gcattacgccattgtctgccggatcatcttaaatccaatacatttgccaattgtttaaat
aatgatcgtggcacaaaaagttggctacatcaattattgaaaaatattgaaaaagatcca
caacaacaacaacaacaatcaatgggtggtggtccaaatcctgtagttgttggtcaatca
gcatcaccaggagccatacaacaagctggaaataatgctgccaatataatgcttgcagca
gcagcagccgccgctggtggtggtggttgtaatgttcctgtttcagctggacaaatgatg
aacactccatctaaatcgaataaaatgtaa
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