Dermatophagoides farinae (American house dust mite): 124498362
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Entry
124498362 CDS
T08043
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03030
DNA replication
dfr03410
Base excision repair
dfr03420
Nucleotide excision repair
dfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124498362
03410 Base excision repair
124498362
03420 Nucleotide excision repair
124498362
03430 Mismatch repair
124498362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfr03032
]
124498362
03400 DNA repair and recombination proteins [BR:
dfr03400
]
124498362
DNA replication proteins [BR:
dfr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124498362
DNA repair and recombination proteins [BR:
dfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124498362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_22
Rad17
AAA_19
RNA_helicase
AAA_14
nSTAND3
RuvB_N
AAA_16
AAA_18
AAA_5
NACHT
AAA_33
AAA_17
NPHP3_N
ABC_tran
AAA_30
Motif
Other DBs
NCBI-GeneID:
124498362
NCBI-ProteinID:
XP_046918061
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MSSIKKRKHPIVDNSDDDDDNDRGENKLIQSSKIRESKNGKKSAPEHGKKKRKRIVLMIS
SSDEDEEKKDEVIDTKITDSINEIKKDAKIRARKLAAGTVDIENDGKSTSKKTSKSPKIT
PPNQRNNILNYFKPKNIDSNAEKQVIKKQSNEKIIETSTIKDDEGYTYTTVKPYNKSSLP
PIMDKQQKSSNDQIKESNNKNSNHKDSTKKLAAKTENDDDDDDENMTAIIIRKSSKHHDS
PQKSKNNQLNNNHNNEKIDKIKESPLKSNKLSKVEPTMNEREKSEPKNYGESLPRIVEQQ
RVSELWVDKYKPTSVRQIIGQQGDRSSLNKLIKWLRNWHSNMDKKPGFGKWGPDDGAGFR
AALLSGPPGIGKTTTAQLVCKELRYDYLELNASDQRNKKSLHENVRDLLKNTKLTDFFKS
TTVFDDKKSTDNEQKLTARHCLIMDEVDGVSGNEDRGGVAELIQLIKTTMIPIICICNDR
GDQKMRSLVNYCFDLRFHKPKFEQIRSTLLSIVFKEKLKIASDVLDDLIVSSNFDIRQCI
HNLYLLATQSSSKVSELIKQQERPIKDVRLTPFEAIKKVFITGRDYAMMSLDEKSNLFFC
DYSIMPLFVYENYISINLSSKQRSVGKQLKRLYKSIDAISESDLIEKEIRSNQSWSLLPL
QAIFSTVMPGAYMRSENGLGFPQFPQFMGKLSTTNKNNRITEELASHMKLSVNGSKQSIV
MDYLEPIKTIIIDSLKNLDKESAITNVIDLLEQYSLTKEDMDSILEFSLWAGEQDPMKTI
DSKIKAALTRSYNKKDFALPYARDNDYRNVTTKSSGKKGKGKKNKNDLESSQDESSVNND
DDDNNDNGLTGIMDFY
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaattaagaaacgtaaacatccaattgttgataacagtgatgatgatgatgac
aatgatcgtggcgaaaacaagttaattcaaagttccaaaatacgtgaatctaaaaatggg
aaaaaatctgcacctgaacatggtaagaaaaaaagaaaacgtattgttctgatgataagt
agtagtgatgaagatgaagaaaaaaaagatgaagtaatcgatacaaaaattaccgattca
attaatgagattaaaaaagatgctaaaattcgtgcacgaaaattggctgccggtaccgtc
gatatagaaaatgatggtaaatcaacatcgaaaaaaacatcaaaatcaccaaaaattact
ccaccaaatcaaagaaataatattttgaattattttaaacctaaaaatattgattcgaat
gccgaaaaacaagtgattaaaaaacaatcgaatgaaaaaatcattgaaacatcgacaatc
aaagatgatgaaggttatacgtataccacggtgaaaccatataataaatcaagtttaccg
ccaataatggataaacaacaaaaaagctccaatgatcaaataaaagaatcgaataataaa
aattccaatcacaaagattcgacaaaaaaattggcagctaaaaccgagaacgatgatgat
gatgatgatgaaaatatgacagcaattataatcagaaaatcatcaaaacatcatgattcg
ccgcaaaaatccaaaaataatcagcttaacaacaaccataacaatgaaaaaattgataaa
atcaaagaatcacctttgaaaagtaataaattgtcaaaagtagaaccgacgatgaacgaa
cgagaaaaatcagaaccaaaaaactatggtgaaagtctgccaagaattgttgaacaacaa
agagtttccgaattatgggttgataaatacaaaccaaccagtgtgagacaaataatcggt
caacaaggtgatcgtagttccttaaataaattgattaaatggctacgaaattggcattcg
aatatggataaaaaacctggattcggtaaatggggacctgatgatggtgcaggatttcgt
gctgcattacttagtggtccacctggtatcggtaaaactactacagcacaattagtgtgt
aaagaattacgatatgattatctggaattgaatgcatcggatcaacgaaataaaaaatcg
ttacatgaaaatgttcgtgatttattgaaaaatacaaaattgacggattttttcaaatca
accaccgtttttgatgataaaaaatctacggataatgaacaaaaacttaccgcaagacat
tgtctaataatggatgaagtagatggcgtttccggcaatgaagatcgtggcggtgttgcc
gaattgatacagctaatcaaaacgacaatgataccaatcatttgtatatgtaatgatcgt
ggtgatcaaaaaatgcgttcattagttaattattgttttgatttacgatttcataaacca
aaatttgaacaaataagatcaacattattgtcgattgtatttaaagaaaaattgaaaatc
gcttcagatgttttagatgatttgattgtatcatccaattttgatattcgtcaatgtatt
cataatctttatttattggctacacaatcatcatcaaaagtttcggaattgatcaaacag
caagaacggcctatcaaggatgttcgattgacaccatttgaagcgataaaaaaagtattc
atcactggtcgagattatgctatgatgtctttggatgaaaaatcgaatctatttttctgt
gattattcaataatgccgttatttgtttatgagaattatatttcaattaatctatcaagt
aaacaacgcagtgttggtaaacaattgaaacgtttatataaatcaatcgatgctatatcc
gaatcggatttaattgaaaaagaaattcgttcaaatcaatcatggtcattattaccattg
caagcgatattctcgacagtaatgcctggcgcatatatgcgtagtgaaaatggtcttggt
tttccacaatttccacaatttatgggcaaattatctacgacaaataaaaataatcgtatc
accgaagaattagcatcacatatgaaattatcggtgaatggatcaaaacaatcgatcgta
atggattatttggaaccgataaaaacaattattattgattcattgaaaaatttggataaa
gaatctgcaattacgaatgtaatcgatttattggaacaatattcattaacaaaagaagat
atggattcaatattggaattttctttatgggcaggtgaacaggatccaatgaaaacaatt
gattcgaaaataaaagcagctttaacacgttcttataataaaaaagattttgcattacca
tatgcacgtgataatgattatagaaatgtaactacgaaatcaagtggaaagaaaggaaaa
ggaaaaaagaataaaaatgatttggaatcatcacaagatgaatcatcagtgaataatgat
gatgatgataataatgataatggtctaacaggaattatggatttttattga
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integrated database retrieval system