KEGG   Dermatophagoides farinae (American house dust mite): 124498362
Entry
124498362         CDS       T08043                                 
Name
(RefSeq) replication factor C subunit 1-like
  KO
K10754  replication factor C subunit 1
Organism
dfr  Dermatophagoides farinae (American house dust mite)
Pathway
dfr03030  DNA replication
dfr03410  Base excision repair
dfr03420  Nucleotide excision repair
dfr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124498362
   03410 Base excision repair
    124498362
   03420 Nucleotide excision repair
    124498362
   03430 Mismatch repair
    124498362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfr03032]
    124498362
   03400 DNA repair and recombination proteins [BR:dfr03400]
    124498362
DNA replication proteins [BR:dfr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124498362
DNA repair and recombination proteins [BR:dfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124498362
SSDB
Motif
Pfam: RFC1 AAA AAA_22 Rad17 AAA_19 RNA_helicase AAA_14 nSTAND3 RuvB_N AAA_16 AAA_18 AAA_5 NACHT AAA_33 AAA_17 NPHP3_N ABC_tran AAA_30
Other DBs
NCBI-GeneID: 124498362
NCBI-ProteinID: XP_046918061
LinkDB
Position
Unknown
AA seq 856 aa
MSSIKKRKHPIVDNSDDDDDNDRGENKLIQSSKIRESKNGKKSAPEHGKKKRKRIVLMIS
SSDEDEEKKDEVIDTKITDSINEIKKDAKIRARKLAAGTVDIENDGKSTSKKTSKSPKIT
PPNQRNNILNYFKPKNIDSNAEKQVIKKQSNEKIIETSTIKDDEGYTYTTVKPYNKSSLP
PIMDKQQKSSNDQIKESNNKNSNHKDSTKKLAAKTENDDDDDDENMTAIIIRKSSKHHDS
PQKSKNNQLNNNHNNEKIDKIKESPLKSNKLSKVEPTMNEREKSEPKNYGESLPRIVEQQ
RVSELWVDKYKPTSVRQIIGQQGDRSSLNKLIKWLRNWHSNMDKKPGFGKWGPDDGAGFR
AALLSGPPGIGKTTTAQLVCKELRYDYLELNASDQRNKKSLHENVRDLLKNTKLTDFFKS
TTVFDDKKSTDNEQKLTARHCLIMDEVDGVSGNEDRGGVAELIQLIKTTMIPIICICNDR
GDQKMRSLVNYCFDLRFHKPKFEQIRSTLLSIVFKEKLKIASDVLDDLIVSSNFDIRQCI
HNLYLLATQSSSKVSELIKQQERPIKDVRLTPFEAIKKVFITGRDYAMMSLDEKSNLFFC
DYSIMPLFVYENYISINLSSKQRSVGKQLKRLYKSIDAISESDLIEKEIRSNQSWSLLPL
QAIFSTVMPGAYMRSENGLGFPQFPQFMGKLSTTNKNNRITEELASHMKLSVNGSKQSIV
MDYLEPIKTIIIDSLKNLDKESAITNVIDLLEQYSLTKEDMDSILEFSLWAGEQDPMKTI
DSKIKAALTRSYNKKDFALPYARDNDYRNVTTKSSGKKGKGKKNKNDLESSQDESSVNND
DDDNNDNGLTGIMDFY
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgagttcaattaagaaacgtaaacatccaattgttgataacagtgatgatgatgatgac
aatgatcgtggcgaaaacaagttaattcaaagttccaaaatacgtgaatctaaaaatggg
aaaaaatctgcacctgaacatggtaagaaaaaaagaaaacgtattgttctgatgataagt
agtagtgatgaagatgaagaaaaaaaagatgaagtaatcgatacaaaaattaccgattca
attaatgagattaaaaaagatgctaaaattcgtgcacgaaaattggctgccggtaccgtc
gatatagaaaatgatggtaaatcaacatcgaaaaaaacatcaaaatcaccaaaaattact
ccaccaaatcaaagaaataatattttgaattattttaaacctaaaaatattgattcgaat
gccgaaaaacaagtgattaaaaaacaatcgaatgaaaaaatcattgaaacatcgacaatc
aaagatgatgaaggttatacgtataccacggtgaaaccatataataaatcaagtttaccg
ccaataatggataaacaacaaaaaagctccaatgatcaaataaaagaatcgaataataaa
aattccaatcacaaagattcgacaaaaaaattggcagctaaaaccgagaacgatgatgat
gatgatgatgaaaatatgacagcaattataatcagaaaatcatcaaaacatcatgattcg
ccgcaaaaatccaaaaataatcagcttaacaacaaccataacaatgaaaaaattgataaa
atcaaagaatcacctttgaaaagtaataaattgtcaaaagtagaaccgacgatgaacgaa
cgagaaaaatcagaaccaaaaaactatggtgaaagtctgccaagaattgttgaacaacaa
agagtttccgaattatgggttgataaatacaaaccaaccagtgtgagacaaataatcggt
caacaaggtgatcgtagttccttaaataaattgattaaatggctacgaaattggcattcg
aatatggataaaaaacctggattcggtaaatggggacctgatgatggtgcaggatttcgt
gctgcattacttagtggtccacctggtatcggtaaaactactacagcacaattagtgtgt
aaagaattacgatatgattatctggaattgaatgcatcggatcaacgaaataaaaaatcg
ttacatgaaaatgttcgtgatttattgaaaaatacaaaattgacggattttttcaaatca
accaccgtttttgatgataaaaaatctacggataatgaacaaaaacttaccgcaagacat
tgtctaataatggatgaagtagatggcgtttccggcaatgaagatcgtggcggtgttgcc
gaattgatacagctaatcaaaacgacaatgataccaatcatttgtatatgtaatgatcgt
ggtgatcaaaaaatgcgttcattagttaattattgttttgatttacgatttcataaacca
aaatttgaacaaataagatcaacattattgtcgattgtatttaaagaaaaattgaaaatc
gcttcagatgttttagatgatttgattgtatcatccaattttgatattcgtcaatgtatt
cataatctttatttattggctacacaatcatcatcaaaagtttcggaattgatcaaacag
caagaacggcctatcaaggatgttcgattgacaccatttgaagcgataaaaaaagtattc
atcactggtcgagattatgctatgatgtctttggatgaaaaatcgaatctatttttctgt
gattattcaataatgccgttatttgtttatgagaattatatttcaattaatctatcaagt
aaacaacgcagtgttggtaaacaattgaaacgtttatataaatcaatcgatgctatatcc
gaatcggatttaattgaaaaagaaattcgttcaaatcaatcatggtcattattaccattg
caagcgatattctcgacagtaatgcctggcgcatatatgcgtagtgaaaatggtcttggt
tttccacaatttccacaatttatgggcaaattatctacgacaaataaaaataatcgtatc
accgaagaattagcatcacatatgaaattatcggtgaatggatcaaaacaatcgatcgta
atggattatttggaaccgataaaaacaattattattgattcattgaaaaatttggataaa
gaatctgcaattacgaatgtaatcgatttattggaacaatattcattaacaaaagaagat
atggattcaatattggaattttctttatgggcaggtgaacaggatccaatgaaaacaatt
gattcgaaaataaaagcagctttaacacgttcttataataaaaaagattttgcattacca
tatgcacgtgataatgattatagaaatgtaactacgaaatcaagtggaaagaaaggaaaa
ggaaaaaagaataaaaatgatttggaatcatcacaagatgaatcatcagtgaataatgat
gatgatgataataatgataatggtctaacaggaattatggatttttattga

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