Dermatophagoides farinae (American house dust mite): 124498860
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Entry
124498860 CDS
T08043
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124498860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124498860
03009 Ribosome biogenesis [BR:
dfr03009
]
124498860
Enzymes [BR:
dfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124498860
Spliceosome [BR:
dfr03041
]
Complex A
U1 snRNP components
U1 related factors
124498860
Complex B
124498860
Ribosome biogenesis [BR:
dfr03009
]
Eukaryotic type
Pre-60S particles
Helicases
124498860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124498860
NCBI-ProteinID:
XP_046918636
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MNYRLLLRKSVQLTWTNKSLLELLNKTNVCPIALHHNKYWSPICLSPKNFPIFCPRIRYN
QTSTLIEPNELLNEAIKQFRSEHQVFVENVKDGRNIFEFSELDMPIKLQEIMTKSGYTKP
TPIQAQALPILFSSLDLIGIAQTGSGKTLAYLLPAFTQLYPIHRDYWTDRRLGKQLKPKA
LILAPTRELAVQIFDVIKQFKIFKSICLYGGNDRRKQIEYLENNNPLFLVSTPGRLKDLI
DARYVDLSEINYLVIDEADRMLDMGFEPQISYLIDQCPDRFHRQTMMFSASWPDEVKSFV
HKYLKPEHAFISIGGTKLVANHNIQQNVVVCNSSQRFELMEKILHHHPDEKTLLFCNTKI
DCDRISRYIYQRLRIPSSALHGDMTQRQRESALKGFKLGQIKLLCATNVAARGLDIDDVN
IVINYDFPGDIETYVHRIGRTGRKDNKGIAYSFFSDRLNSLLARKLIEILRESNNKIPEE
LSRISTTQNHPQKSLSSSISRKHQKQWQMNRHPSKYSTTKKSFY
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcgcttactattacgaaaatccgttcaattgacatggacaaacaaaagtcta
cttgaactattgaataaaactaatgtttgtccgattgcattacatcataataaatattgg
tcaccgatttgtttatcgcctaaaaattttcccattttttgtcctcgaatacgatacaat
caaacatcaacattaattgaaccaaatgaattgttgaacgaagcaatcaaacaatttcga
tcagaacatcaagtatttgttgagaatgttaaagatggacgaaacatattcgaattcagt
gaattagatatgccgataaaacttcaggaaattatgaccaaaagtggttacacaaaaccg
acacctattcaagcacaggctttaccgatattattctccagccttgatttaattggtatt
gctcaaactggttctggaaaaacattggcatatctattgccagcatttactcaattatac
ccaattcatcgagattattggaccgatagacgattaggaaaacaattaaaacctaaggca
ttgattttggctccaacacgagaactagccgtacagatatttgatgttatcaaacaattt
aaaatctttaaatccatttgtttatacggtggaaatgatcgacgaaaacaaatagaatat
cttgagaataataatccactatttttggtttcaacacctggacgacttaaagatctgatc
gatgctagatatgttgatttaagcgaaataaattatctggtcattgatgaagctgatcgt
atgttggatatgggtttcgagccacagatatcctatttaattgatcaatgtcctgatcga
tttcatcgtcaaacaatgatgttttcagcatcatggccagatgaggttaaatcattcgta
cataaatatttaaaaccagaacatgcattcatctcgattggtggtacaaaattagttgct
aatcataatattcaacaaaatgttgtcgtatgcaattcgagtcaacgttttgaattgatg
gaaaaaattcttcatcatcatccggatgaaaaaacattgttgttttgtaatacaaaaatc
gattgtgatcgaatttccagatatatttatcagcgattacgaataccatcttcagctttg
catggagatatgacacagcggcaacgagaatcggctttaaaaggttttaaacttggtcaa
attaaactattatgtgcaacaaatgtagccgcacgaggtcttgatattgatgatgttaat
attgttattaattatgattttcccggtgatattgaaacatatgttcatcgtattggtcgt
acaggacgaaaagataataaaggtattgcgtattcatttttcagtgatcgtttaaattca
ttgttggcacggaaactaattgaaattttacgtgaatcgaataataaaataccggaagaa
ttgtccagaatttcaactacacaaaatcatccacaaaaatcattatcatcatcaatatcc
cgaaaacatcaaaaacaatggcaaatgaatcgtcatccatcaaaatattcaacgacgaaa
aaatcattttattag
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