Dermatophagoides farinae (American house dust mite): 124499013
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Entry
124499013 CDS
T08043
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124499013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfr03400
]
124499013
DNA repair and recombination proteins [BR:
dfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124499013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_23
AAA_29
AAA_14
AAA_27
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
124499013
NCBI-ProteinID:
XP_046918812
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MANNDISGSKNDIIFDSEFIQFYLEIRKSQGENVFILFNHGSYYTLHDSNAEYVSKNFLN
TTESLKNFQTKNHHTVVYTCISQTRFPSLIRHLLIENNFAVEIYSKTNPKSNIKQWRLEI
EASPGYLGPFENLLYEADVNISIQLSAVYILDDENDDRNNHVSVVSIDPIACQIFLGHFQ
DNDCLRQLETILVRSNPKECFIPNAGNSTKKLSQLLKRNRVMIRKYSVQYQSDNYQLATV
LKNLAVPECREMVENFLQQTVNINEVLCPLKPLLLKQKLLVTEAENITSDASLNYPFGCF
FIKLLNPKQFLRLDLSSIQHLHLFPSKLDSKSKHSLFQILNRCKTYCGMKLLEQFLRQPS
TDYTTIQTRLDIVEFFSENPAIMDSIREQILPRIPDMTKLYKKLNTGRYQIKDVFQLYFV
LDYLRRLKTVFDNHGQQFPLVVQRMLINKLSKYLAQTNRLYMRLVQVLDLDNYAQSGEFK
LNVKTFPELTEVNSLMQQFAKRVREEHRMLQNKYDDGISLEQNKDIGWFYEINKKTIGTI
GVKSVVYRTISSKSEKSMKFLTRLLTEINDEFSTLGKHFEKLSQNCIRLVLKECQDDLYR
ISSLQSYVSLLDILTSFAKVATDSPVPFTKPKILAQGSNEIELKQFRHPILESINGGQFV
PNDIRFNQSRKVFIITGPNMGGKSTLLRSVALSVLMAQIGCFVPCESARISLTDAIYTRM
SSSDDQSLGMSTFMAEMYEIAGILKSATQNSLILIDELGRSTSTNDGFGLAQSIIEHIAR
EIRAYTLFATHFHNLGLSLSKGLLHRLHMQSSFNELQQLIIHYRALPDEESQYNSQSFGI
EVMKSVGMPEHLIRAAQDRLERIYDSTIDSRIFNQVIDTIIDDFSLSSSIEKIFDLV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaatgatatttcaggttcaaaaaatgatatcatattcgattcggaatttatt
caattttatttggaaattcgaaaatctcaaggcgaaaatgtgtttattttgttcaatcat
ggatcatactatacacttcatgacagcaatgctgaatatgtttcgaaaaatttcctgaac
actactgaaagtttgaagaattttcaaacaaaaaatcatcataccgttgtgtacacttgt
atcagtcaaacacgttttccatcattaattcgtcatttgttgattgaaaataattttgct
gttgaaatctattcgaagacaaatccaaaatcgaatatcaaacaatggcgtttagaaatc
gaagcttcacctggttatctgggcccttttgaaaatcttttgtatgaagctgatgtcaat
atttccattcaattatcggctgtctacattcttgatgatgaaaatgatgatcgaaacaac
catgtttccgtcgtttctattgatcctatcgcatgtcagatttttttaggacatttccaa
gacaatgattgtctccgtcaattagagactattttagttcgttcaaaccctaaagaatgc
tttattccgaatgcaggtaattccacaaaaaaattatctcaattgttaaaaagaaatcgt
gttatgattcgtaaatattcagttcaatatcaaagtgataattatcaattggccacagta
ttaaaaaatttagctgtaccagaatgtcgcgaaatggtcgaaaattttctacagcaaact
gtcaatatcaatgaagtattgtgtccactcaaaccgttattattgaagcaaaaattgctt
gtcactgaagctgaaaatataacatcagatgcttcattgaattatccgtttggttgtttc
tttataaaattgctcaacccaaaacaatttctacgtttagatttatcatccattcagcat
ttacatttattcccatcgaaacttgattcaaaatcgaaacattcgctgtttcaaatttta
aatcgatgcaaaacttattgcggaatgaaacttttggagcaatttctccgacaaccatcg
accgattatacaaccattcagactagactagatattgtggaatttttctcggaaaaccca
gcgattatggattcgattcgagaacagattcttcctcggataccagatatgacaaaattg
tataaaaaattaaacaccggtcgctaccaaatcaaagatgtatttcaactttactttgtt
ctggattatcttcggcggctaaaaacagtctttgacaatcatggtcaacaatttccgttg
gtagtacaacgaatgttaattaataaactttcgaaatatttggctcaaaccaatcgatta
tacatgcgtctggttcaagttttagatttggacaattatgctcaatctggagaatttaaa
ctaaatgtgaaaacatttcctgaattgacggaagttaattctttgatgcaacaatttgcc
aaacgtgttcgtgaagagcatcgaatgttacagaataaatatgatgatggaatatcattg
gaacaaaacaaagacattggttggttttatgaaattaacaaaaaaactattggaacaatt
ggagttaaatccgtagtttatcgaacgatttcatccaaatccgaaaaaagtatgaaattt
ttgacccgattattgaccgagataaatgacgaattttcgactttgggaaaacattttgaa
aaattaagtcagaattgcatacgccttgtattgaaagaatgtcaggatgatttgtatcga
atttcttctttgcaatcatacgtttctcttttggacattttgacatcatttgccaaagtt
gcaaccgattctccagtgcctttcactaaaccaaagattcttgcacaaggaagcaacgaa
attgaattgaaacaatttcgacatcctattttagagtcgattaatggtggtcaattcgta
ccaaacgatatacgatttaatcaatctcgcaaagttttcataataactggaccaaacatg
ggtggtaaatcaacattattgcgatcggtagcactctctgtattgatggctcagattgga
tgttttgtaccttgtgaatctgctcgtatttctttgacggatgctatctacacacgaatg
agttcaagtgatgatcaatcactgggcatgtcaactttcatggctgaaatgtatgaaatc
gcaggcattctaaaatcagctacacaaaattccttgatattgatcgatgaactaggacgt
tcaacatctaccaacgatggatttggtttggcacaatcaatcattgaacatattgctcgt
gagatccgtgcttatacattatttgctacacatttccataatttaggattatcattatca
aaaggtttattacatcgtcttcatatgcaatccagctttaatgagttacaacaattaatt
attcattatcgtgcattgcctgacgaagaatcgcaatataattcacaatcatttggtatc
gaagtaatgaaatcggtcggaatgccagaacatctcattcgagcagcacaagatcgattg
gaaagaatctatgattctacaattgattcaagaatattcaatcaagtaatagatacaatt
attgatgatttttcattatctagttctatcgaaaaaatttttgatcttgtttaa
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