Dermatophagoides farinae (American house dust mite): 124499576
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Entry
124499576 CDS
T08043
Name
(RefSeq) nucleoporin NUP188-like
KO
K14311
nuclear pore complex protein Nup188
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124499576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124499576
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124499576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
124499576
NCBI-ProteinID:
XP_046919460
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MNSNNHSSEDLPRSMKNLWTLLSGSLNLKSLQFIADELESNQKQLIEGVLYYRPHDVNVD
SMSKIMEMKNTMVNASFLYNLSVLLDLNARQCCDLIQSYLLYEFDGTPEMARTLFANEKQ
RKRLFENLWNYYYSERIFGLFCLKQILSNWKESEHVYAKIFQDFLKHINTDEQISTKLMA
QLKHLIHVHEKPRQSKIQHFLSEKNSDDLTINIRKEEIQVLQLLLLYYKNFVPTAEDVLD
ILKCFHETGFETSNHNHSNRLPQIKSLGQFCGFLKTILIVEFLDPNGLRKCQNDDVEHYL
FRGENEAVIRQIFSIIINLNSTAQEHSLLFFTWTIINQFCSIDNNQDQDVIERLGNNALQ
LKIFKYIESCVSCLEPMDLLKKSSVHNLIYEIIGNLLEVTFSVFDFEKFIHNDTTLTQLL
IHLFTSDVIARILFDSGLTTGLGLSLRYALNLFPHRTHLLLSLLNSLAQTNMCRNLFEQL
SIINTLTSFTESFDSLDINDYYTSQTDSVACIVLYNDRYLYNDHQLKLVKGSRGTIHYYE
GCRLIQWNDLMMDGWKILYRRLKYLINQIKQGHMYSTINDEVILNEISKLALICSELIVH
NSHSNITFFEPIVRLLLELFKLIVSVDQTTIRLFVASIIKLCVEMMRQNFMDEKEIWSTL
TDKRFFPYMIGFCNQFNEILTGTDTNISTLGYILATDEFIKGNYELTISFLSLMTYMIEN
DEYHHDNSIIASFMFIVNDIFPSYKLWNYRRENDAHRIGRMCIQIFHHIINRVRRKMANE
LIMIEKICIIRLMEGQAAEQLLTIIKSGEEIVKERIVNSGNELLLEVDDQIVSIRTSILI
LSHLLEMYSEVTKLSSLKDKSVIEKIIFSSTNNAKPNMLLIFTHFICQKYDIYLAINALQ
LINQLAFKFPMSMLACFGSHTEFIRDHFLFRLETVTEDINFKIAMLNFLSTCVEYQPGLV
EMFLNVSTATTNNNSILNSIIEILEEKMNGQYHCPYEFHHASLQFVVKFWLKPNIMAMNK
LKNNDKFWILVTFPLFNDQRNIDNSLCSFVLKILSREIHFTKLLEKTDVSSNLTNIFDDM
IDKNVIANFSAHIRHQLSDSKLWTADFINFIDGWRDFLASWTKFILTRDSTCVIKMLIKD
ILEYVSILIDTDIIEKKTNKLINKFSNLLLIITSDNQQFEKAILNDSEEYMKIVTEIFNK
IVIHKESISFNSQISLGVFLIKLIDERRSISSPQDQELFYSIVELLNNSFRLMAKQLNSD
LQPVNLNLEKRLIHVNLSIIIVMFQRCSKMNIRYLKILRHFGTSEQILNMLIYFLRKRIH
LDLAQNIAPYFVVISHSSDGASLLNALNLVNQMSVNFSLTTNTIAGIDDRMNDSDFIHDI
AIFSQIVRTVNNMIIHLRHHFSETCVSFIAIYLDTIREIFAAFRKQPKLKIIRLVLLILE
LCSSTSKYVKIWQNNHAISFKIITEEILLSSNMMVAFLLRPTLVLKTFMEEYKQSNGHDA
LQNMMILMLLESMKFLIDVSPGLLELFANEAINDEEAKYNNLLISTNFSFPNVDSNDILT
FGSLANLINFLIKQEKDGKRIGVADDNCQLQISLLELSLVLFFTQSLIAKNSLKMIPSDE
QRFFHEIHNELNTFKSNLKTHHHPRKQTSSSTMLKMTSPMMKPVPPSSIHHLSERPFIKM
MLNMVENILHKSN
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaataatcattcatcggaagatttaccaagatcgatgaaaaatttatggaca
ctattatccggttcgttgaatttaaaatcacttcaattcatagcagatgaattggaatcg
aatcaaaaacaattgattgaaggtgttctatactatcgaccacatgatgtcaatgttgat
tcaatgtcaaagataatggaaatgaaaaatacaatggtgaatgcttcgttcctttacaat
ctaagcgttctactcgacctgaatgctcgacaatgttgtgatctgattcaatcatatttg
ctttatgaattcgatggtacacccgaaatggcccgaacattatttgccaatgaaaaacag
aggaaaagattgtttgaaaatctttggaattattattattcagaacgaattttcggcctt
ttctgcctgaaacaaatactcagcaattggaaagaaagtgaacatgtttatgcgaaaata
tttcaagattttctcaaacatatcaatacagacgaacaaatatccacaaaattgatggca
caattgaaacatttgatacacgttcatgagaaaccacgacaatcaaaaattcaacatttt
ttaagcgaaaaaaattccgatgatctcaccatcaacatacgaaaagaagagattcaagta
ctacaattgcttcttttgtattataaaaatttcgtaccaaccgctgaagatgttttggat
atattgaaatgttttcatgaaacaggtttcgaaacatcaaatcataatcatagtaatcgc
ctaccgcaaataaaaagtttaggtcaattttgtggttttcttaaaaccattttgattgtt
gaatttctggatccaaatggtcttcgaaaatgtcaaaacgatgatgttgaacattatctt
tttcgtggtgaaaatgaagccgtaattcgacagattttttcgataattatcaatctaaat
agcacagcacaagaacattcgcttttatttttcacctggacaatcatcaatcaattctgt
tcaatagacaataatcaagatcaagatgtaatcgaacgtttaggaaataatgcattacaa
ttgaagatattcaaatatattgaatcctgtgtttcgtgtctggaaccgatggatctgttg
aagaaaagctctgtccataatttgatttatgaaattatcggtaatctattagaagtaacg
ttctctgtatttgattttgaaaaatttatccacaatgatacgacactcacacagttgcta
attcatctattcacaagtgatgtgatcgctcgaattttattcgattccggtctaaccact
ggattgggattatcattgcgatatgcattgaatctgtttccacatcggacacatctattg
ctgagcttattgaattcattggcccaaacaaacatgtgtcgaaatttattcgaacaatta
tcaataatcaatacattgacttcattcactgaatcatttgattcgttggatatcaatgac
tattatacatcacaaacagattcagtggcttgtattgtattgtacaatgatcgatattta
tacaatgatcatcaattgaaattggtgaaaggttcccgtggcactattcattattatgaa
ggctgtcgtctaattcaatggaatgatctaatgatggacggatggaaaattctttataga
cgattgaaatatctgataaatcaaatcaaacaaggtcatatgtattcaaccataaatgat
gaagttatattgaatgaaatcagtaaactggcgcttatttgttcagaattgatcgtacat
aattcacattcgaatatcacatttttcgaaccaattgtcagattattgcttgaattattt
aaattgattgtatcagtagatcagacaacgattcgtttgtttgtggcttccataatcaaa
ttatgtgttgaaatgatgcgtcagaattttatggatgaaaaagaaatctggtcaacattg
actgataaacgtttctttccatacatgattggattttgcaatcaattcaatgaaatatta
actggaaccgatacgaatatttcaacattgggatacatcctcgccaccgatgaattcatt
aaaggcaattatgaattgacaatatcgtttctttcattgatgacatatatgatcgaaaat
gatgaatatcatcacgataattccataattgcttcattcatgttcattgtgaatgatatt
tttccatcctataaattatggaattatcgccgagaaaatgatgcacatcgtatcggtcga
atgtgtatacagatttttcatcatattatcaatcgtgtacgacgtaaaatggccaatgaa
ttgataatgattgaaaaaatctgtatcatacgattgatggaaggccaagctgccgaacaa
ttattgacaatcattaaaagtggggaagaaattgtgaaagaaagaattgtcaattcaggc
aatgaattactactggaagtggatgatcaaattgtcagtattcgtacatcgatattaata
ttaagccatctattggaaatgtattccgaagtgacgaaattgtcatcgcttaaagataaa
tctgttatcgagaaaatcattttctcatcaaccaacaatgccaaaccgaatatgttgttg
atatttacacatttcatttgtcaaaagtatgacatttatctggccatcaatgcattacaa
ttgattaatcagttagcattcaaattcccaatgtcaatgttggcatgttttggctcacac
accgaatttattcgtgatcatttcctatttcgattggaaacagtaaccgaagatatcaat
ttcaagattgcaatgttgaatttcctatccacatgtgttgaatatcaacctggtttggtg
gaaatgtttttgaatgtttccactgccaccaccaataataatagcattctaaactcaatc
atcgagattttagaggaaaagatgaatggccaatatcattgtccatatgaatttcatcat
gcatcattacaatttgtggtgaaattctggttgaaacccaatataatggctatgaataaa
ttgaaaaataatgataaattctggatattggtcacatttccattgtttaatgatcaacgg
aatatcgataactcattatgtagttttgtattgaaaatattatcacgtgaaattcatttt
actaaattacttgaaaaaactgatgttagcagcaatctaaccaacatattcgatgatatg
attgacaagaatgttattgcaaatttttccgcgcacattcgtcatcaattgagcgacagt
aaattatggacagcagattttatcaattttattgatggttggagagatttcttagcgtca
tggactaaattcattctgactcgtgattcaacttgcgtgatcaaaatgctcatcaaagat
atattggaatacgtttcaatattgatcgataccgatatcattgaaaaaaagacaaacaaa
ttgatcaataaattttcaaatcttctgctgataattacatcggataatcaacaatttgaa
aaagccattttaaatgatagtgaagaatatatgaaaattgtgactgaaattttcaacaaa
attgtcatacataaagaatccatttcattcaattcacaaatttcactcggtgtttttctc
atcaaattgatcgatgaacgacgatcaatatcatcaccgcaagatcaggaattattctat
tcaattgttgaattattgaacaattcatttcgattaatggccaaacaattgaatagtgat
ttgcagccagtgaatttaaatcttgaaaaacgattaattcatgtcaatctttccatcata
atcgtaatgtttcaacgatgttcgaaaatgaatattcgttatctgaaaatattgcggcat
tttggcaccagtgaacaaatactgaatatgctcatctattttcttcgtaaacgtatccat
ttggatttagctcagaatattgcaccatattttgttgttatatcacattcatcggatggt
gccagtcttttgaatgcattgaatttagtgaatcaaatgtcggtgaatttttcattgact
actaacaccatagcaggaatcgacgatagaatgaatgattcagatttcatacatgatatt
gctatattctcacaaattgtacgaaccgtaaacaatatgatcattcatttgcgacatcat
ttcagcgaaacttgtgtatcattcattgccatctatctggacaccatacgtgagattttt
gctgcttttcgtaaacaacctaaattgaaaatcatacgacttgtgttgcttatattggaa
ttgtgttcttccacttcgaaatatgtgaaaatatggcaaaacaatcatgcaatttcattc
aaaattataaccgaagaaatactattgtccagtaatatgatggtcgcttttctgcttcgt
cctacacttgtattgaaaactttcatggaagaatataaacagagtaatggccatgatgca
ctgcaaaatatgatgatactgatgctgttggaatcgatgaaatttttgatcgatgtttca
cccggacttttggaattgtttgccaatgaagcgatcaatgatgaagaagcgaaatataat
aatttacttatatcgaccaatttttcctttccaaatgttgattcaaacgatattctaaca
ttcggttcattggccaatctaatcaatttcctcatcaaacaagaaaaggatgggaaaaga
atcggagtagccgatgacaattgccaattacaaatttcacttttagaattgtcattagta
ttgtttttcacacagtcattgattgcaaaaaattcgctgaaaatgattccaagtgatgaa
caaagatttttccatgaaatccacaatgaattgaatacattcaaatcaaatctaaaaact
catcatcatccacgtaaacaaacatcatcgtcgacaatgttgaaaatgacatcaccaatg
atgaaacctgtgccaccatccagtatccatcatctatccgaacgtccttttatcaaaatg
atgttgaatatggtggaaaatattttacacaaatccaattaa
DBGET
integrated database retrieval system
