Dermatophagoides farinae (American house dust mite): 124499726
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Entry
124499726 CDS
T08043
Name
(RefSeq) SR-related and CTD-associated factor 8-like
KO
K13191
RNA-binding protein 16
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfr03021
]
124499726
03041 Spliceosome [BR:
dfr03041
]
124499726
Transcription machinery [BR:
dfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124499726
Spliceosome [BR:
dfr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124499726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Motif
Other DBs
NCBI-GeneID:
124499726
NCBI-ProteinID:
XP_046919632
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MEIIQRFNASLSSLYDDKLPVSKAKISEITKAAITGIRVYKHIVQSVERFIHKCRPEYKL
PALYVIDSIVRHSQHEFRNSKERDVYGQRFNRNLGQTFQNLFSTCLPEDKPKIVRVLNLW
QKNNVFSPDVIQPLLDLANPNTSLLQTSSSTISSETTNIHHHESSNTFLGQQKQQQHQQQ
TSSTTSSSSSSHQHHRSHKRFSNNLDLDLSPKTNDGNDSQKSQMLQNQDQNKASYDRMFS
EASAAFHAVRQLANKCENQNSTSSNADQALASQLQQLASCLSQLQQDHTVKTLNSVDGLN
ETNFDVDPELDLDDNDDDDDDDISTPTEAEPPYPKPSKLSKKFIPNEKTLNTFAGLMQII
RQQSINKTSGEESITTSTGNNGEIQHHFHHYHDDGNSAQDTIFQKFFKSSAVTSASAVAA
QTQQQAASSSMLLPNHVNLQSSSSDLLNSYHCQNQGDHTESLTESSAQLNENQQPLATNS
LNNEFQQSSSKLRSSFRSSRSPSNDRNHGRDRHHRDRDRHRSSRYRRSSSRDDQDRSERR
RSRERSRSSNHRRSRSRSSSRSRDRSDQNIEREREERERQREKRRKGYPPCRKDRMTICS
TTLWIGHLPKRTTSESELNDLFGEFGVIQSIDLIHSRGCAFVCMDRRQDAYKAFAKIKSQ
SKILNSNQVKITWAPGKGIKNKEYKDYWESDIGSSFIPHKILLEQEDIDLDQLEEGGMID
EDSIPEQLKELRRLKRQEKKEKELFIKQQQQIAAVAPTMVTGAVAVNSLIPYPAGYVAAP
PPPPPPIPLLTAPTSTSFKTNPHPSPISFNNSHHQIPIPVPPPPPATALLGLSGSFPPNV
PPPPPPPPPPSSLGHPNLLPPTNPVHVTGNGAQPPNFPCVNPWAPRNSYPLPVPRPPGVL
SSLNHVPPPSLPLNLNQSTVKPPILENKFENSFNQQTNIEPQNSKIENNDNTHNFHEIEN
TAVKNSNNDNENSDGDHINDSQDTPNDNISNHSFGSDNINNNNNHINHQQNRDVHARNFN
SQRFNSPITNDQFHPFSMLPEGHRYSHPPSPIRISGPIIEAPLMMNNHRFPSSPPLMLKN
RDYPQNHPPPPPLTHHQPPILGGALHPRFLPPSPHYGNRYPPPGGPPMFDSPPMSLHHPP
PVQGPRFNNGPRGPFPPINHHYPHHRGPPPPSNFCSGPPIPPPRMPPMHQGPREFWHPAD
GPMMPPYPSNNNQRHRNFRNNNNSRFQQRNQNIQQSKNNRNHNQNNNNNNNNNTNNNGYD
VASQLTAKIEKIDTIIDQSNIEPTKTTDSDSNTVIESSSTAIESS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggagataatacaacgattcaatgcatcattatcatcattgtatgatgataaattacca
gtgtcaaaggctaaaatatcagaaataacaaaggcagcaatcacgggtattcgtgtgtat
aaacacattgtacaatcagtggaacgttttatacataaatgtcgacctgaatataaactt
ccagcattatatgtaattgattctattgttcgacattcacaacatgaatttcgtaattct
aaagaacgtgatgtatatggacaacggttcaataggaatttaggacaaacatttcagaat
ctattctcgacgtgccttcccgaggataagccaaaaattgtacgggttctgaatttatgg
caaaagaataatgtattctcgcctgatgtgatacaaccattattggatttagccaatcca
aatacttcactattacagacttctagctcgacaatttcaagtgaaactacaaatattcat
catcatgaatcatccaacacgttcttgggacagcagaaacagcagcaacatcaacaacaa
acatcatcgactacatcgtcatcatcatcatctcatcaacatcatagatcgcacaaaaga
ttttctaataatcttgatttagatttatcaccaaaaaccaacgatggcaatgattcacaa
aaaagtcaaatgctgcagaaccaagatcagaataaagcatcttatgatcgaatgttttca
gaagcttcagctgcatttcatgccgttcgacaattggccaataaatgcgagaatcaaaat
tcaacaagttcgaatgctgatcaagctttagcatctcaacttcaacaattggcatcctgt
ttgtcacaacttcaacaagatcatactgttaaaacactaaatagtgttgatggcttaaac
gagaccaattttgatgttgatccagaactggatttggatgataatgatgatgatgatgat
gatgatatttcgacgcctacagaagctgaaccgccatatccaaaaccatcaaaattatca
aaaaagtttattccaaatgaaaaaacattaaacacatttgcaggtttgatgcaaatcatt
cgccaacaatctataaacaaaacatcaggtgaagaatcaattacaacatcaactggtaac
aatggtgaaattcaacatcacttccatcattatcatgacgatggcaattcagcacaagac
accatatttcagaaatttttcaaatcttctgcagttacatcagcttcagcagtagcagct
caaacgcaacagcaggcagcatcaagttcaatgctactaccgaatcatgtcaatttacaa
tcatctagctcagatttattaaattcgtatcattgccaaaatcaaggtgatcatactgaa
tccctaacagaaagttcagcgcagcttaatgaaaatcaacaaccattggcgacaaattca
ttaaacaatgaatttcaacagtcgtcatcaaaacttcgttcatcatttcgatcatctcga
tcaccatcgaatgatcgaaaccatggtagggatcgtcaccatagggatcgtgatcgtcat
cgttcatcacggtatcgtcggtcatcatctcgagatgatcaagaccgtagtgaaaggcgt
cgttcacgtgaacgaagtcgttcatcaaatcaccgtagatcacgttcccgtagttcaagc
cgctcacgtgatcgttccgatcagaatattgaacgcgaacgtgaagaacgagaacgacaa
cgagagaaacgtcgtaaaggctatccaccatgtcgaaaagatcgaatgaccatttgtagt
acgactttatggatcggtcaccttcctaagcgaactacatccgaaagcgaacttaatgat
ctatttggtgaatttggcgttattcaaagtatcgatttgattcattcacgaggatgtgca
tttgtttgcatggatcggcgccaggatgcttacaaagcatttgccaagattaaatcgcaa
tcaaaaattttaaattcaaatcaagtcaaaattacctgggcacctggcaaagggatcaaa
aacaaagaatataaagactattgggaatccgatatcggctcttcatttataccacataaa
atattgctagagcaagaagatattgatttagaccaattggaagaaggtggcatgattgat
gaagattctataccggaacaattaaaagaactgcgccgacttaaacgtcaagagaaaaaa
gaaaaagaacttttcattaaacaacagcaacaaatagccgctgtagctccaactatggtt
acaggtgctgttgcagttaattctttgattccttaccctgccggatatgttgccgcgccg
ccaccaccaccaccaccaataccgttattaacagctcccacttcaacatctttcaaaaca
aatcctcacccatctccgatttcttttaataattctcatcatcaaattccgataccagtg
ccgccaccaccaccagcgactgcactattaggattgtcgggctcttttccgccaaatgtt
ccaccaccgccgccgccaccaccaccaccatcgtcattaggtcaccctaatctattaccg
ccaacgaatccggtacatgttacaggaaatggggctcaaccaccgaattttccttgtgtc
aatccttgggctccgagaaattcttatccgctaccggttccaagaccaccaggtgtatta
tcaagtttaaatcatgttccaccaccatcattaccattgaatttaaatcaatcaacagtc
aaaccgccaattcttgaaaataaatttgaaaattctttcaatcaacaaacaaatatagaa
cctcaaaattccaaaattgaaaataatgataatacccataattttcacgaaatcgagaat
actgctgtaaaaaattcaaataatgataatgaaaatagtgatggtgatcatatcaatgat
tctcaggatacgccaaacgataatatttcgaatcattcattcggttccgataatataaac
aacaacaataaccacataaatcatcaacaaaatcgcgacgtccatgcaagaaatttcaat
tcacagagattcaattctcctattacaaatgatcaatttcatccattttctatgcttcct
gaaggacacagatattcacatccaccttcacctattcgtatttccggtcctattatagaa
gcccctctcatgatgaacaatcatcgatttccatcttctcctccacttatgttaaaaaat
agagattatccacaaaatcatccaccgccaccgccacttacgcatcatcaacctccaatt
ttgggaggtgcactacatcctcgatttttaccaccatctcctcattatggaaatcgttat
ccacctcctggtggtccaccaatgtttgacagtccccctatgagtcttcatcatccgcca
ccagttcaaggaccacgattcaataatggaccgcgtggaccgtttccaccaatcaatcat
cattatccacatcatagaggaccaccaccaccttcgaatttctgttctggtccaccgatt
cctccaccgcgaatgcctccaatgcatcaaggacctcgagaattctggcatccagccgat
ggaccgatgatgcctccatatccatcgaacaataatcaacggcatcgaaattttagaaac
aataataattctaggtttcagcaaagaaatcagaatatccaacaatcaaaaaataatcga
aatcataatcagaataacaacaacaacaataataataatacgaataataatggttatgat
gtggcatcacaattgacagcaaaaattgaaaaaattgatacgataattgatcaatccaat
atcgaaccaacgaagacaacggattcggattctaatactgtgattgaatcctcatcgacc
gcgatcgaatcatcgtaa
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integrated database retrieval system
