Dermatophagoides farinae (American house dust mite): 124500028
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Entry
124500028 CDS
T08043
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dfr03036
]
124500028
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124500028
microRNA pathway
RISC loading complex
124500028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
dsrm
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
124500028
NCBI-ProteinID:
XP_046920000
LinkDB
All DBs
Position
Unknown
AA seq
2328 aa
AA seq
DB search
MAANNCKNLSSSNSDNVVISSNSKTMHKFGHRNSMNHPTTRLIRSFALFDNRDFLPRPFQ
IELYEACKNRDTIVFLRPGQGRYFISVMLVKYFNPHLSPSDTDSKTLKKIFFLAKSPSSI
KLYSSVFNAHCNLRIGEYLETEDAKQWSCDIWRDKLQSYDIHLMMDDLFEYLIEQELINA
KDLNLLILNDVHKILLCTSSTDDCYTRIIRRLRSQTNEKQYRILGLSASILLEDVSSNVF
EKMIEQIEXNLGCSCETYADLRMISKYSIQCRIKLRCYPSLLASKEKSDIIHDETKYRMA
LFMIRNYSGQFFNFITNVSLDGGITTEQLINHETIAKMIVDILYIFGTLGEWCALKLIQM
VNRELYDTILLLAKTRSNYLRLLNAAHSTLCLIRKSILSYMDAGIVAKLETSSMTSESES
RLTLSQFLSISAPKLHLLAHVLFEYFEELTSPSTHQTSHSSFTFPSNICSLIYVENRSMA
LVLDEWLRELVAITRDVNSGKISILEFLLPDHVFLAEDDGKNELKNFYYRKHQKSLHEIF
YYRQQEETLRRFRLAQQCNLLITTSMSAEGLDVNRCNMVICFDPPKTFHQFIQSKGRVRV
ECGQFLVLVEKSDHKEYVEKFLQFCNIERIFTKLVPLNNQVFIENEPSKFDLMALASMHF
IKPPQSKPSLPVSMIHKPRKFDKQINQSVNATLQLTLENAISILNRYCNKLPSDTFTKLV
PNYKIEIVHSQAESSENSNEVVPKYRCRLYLPINSTYRDEIMGEIQPTQSLAKQSVAFEA
VKTLREIGELDQNFYPVGKETSRYIEKLGLQDCFISVPKGNQVLQQQHHHSHGPYHQKGN
RYNRIQNRNIASKRRQYYNKKVADSIRGNIFRHDESTNHYYFQYLYEFQMKLTYRLSEEH
NTRGRRIIDPAETTRTFGIISPNSLPTICDFTIYNRSGEITISIVPIIITDSENGYEITD
EKRQQIENFHQYTFENVLPLGKSSLRFDRQNGSNGNYLIVPINFNAEQDNQKTIDWEFLE
LIWHHKNDPKSYDQGILRQDDENKFIFDEQLYRDAVVIPKYRKDKLQAFYYVAEICHYLT
PQSPFPDHEYQTFEKYYNQKYGKQITNLQQPLLDVDHTSARLNLLTPRFLNRRGIHLSSI
KSSDHQSKRNPQQKQILVPELCFIHPFPASFWRKAVCLPCILYRLNLLLIAEELRFKIAK
EAKIGVVELQQEKKWPKLDFGWSVLVEQSRQQTKIEHEQNQFDPIVSNEKQKVISVSNPD
DDFIIDTFDPSMAPPPSNDLFTTIENQNCSSYPAETINNNFINYDSCSSDIIPQIEIISG
PFGYSDKSYSSQRPILPENFMDDDFEEESAIVEVDNENNPIVEPAKTLPVRAGSPTYWED
QENFDSNIKSKFGPNFDWRVYESDGNDDDSNSDEFKTSNTEFRFDFEKFCEDIQHYSKMP
GLADDIQDNERDFDECDDSRCTENMEMSSSKRKSTKTNNRKQKPMITSLSDLDDDDESDE
QIDDGSYSDFDLNDSSDDYEEDELVDSNFDDEDSFDDDEDDDYDDEGGDDDNFTNRYSRC
KNRKTKTAMDLKIQNLTQTMDAYQTKSVIYDILKIELLYDSRQIEQKSLKYYYRHRFSLA
EQHTEHLRKRKIFDEMYYDEQNQVLQCVARIQNKQMADSKHESDSVFCDPEYDLIENDKN
LNHMNLNQPLVSVLMKKIDTSLLEMMKIKHEIEDQKIDQQVQNRSQFVNFPEKNSSSTKI
EVKFGELLPNRDENLTEFTSNDKNPIDLFQVQRQLALQTLPRWLQMENTSDDQLQIGPHP
SLILQAITMSNSSDGINLERLETVGDSFLKYSITAFLFCMCPELNEGKLSFLRSRQISNI
NLHRLGQRINLGELMIASKFEPVDNWCPPSYQALENVEQESSDNVKTTSNKVPYNLLTQH
SIPNKSIADCVEALIGTYLISSGSQGAIQFMDWLGLKVLPKGMKIITKNLPYESSAENKD
ESYQKHERWLPQPRSPLIIPKHLRTDAAKVKEIEDKLQENYFKHHLDRFEKIIGYQFRDR
AYLVQAFTHNSYYENTVTDCYQRLEFLGDAVLDYLITRYLYEDSRCHSPGTLTDLRSALV
NNTFFAALAVKYNFHKYLMMLSSELYRVIDGFVRKFNIYYNQNVANGESKKILSAISDFQ
QGNEDEHMDENSYSNYNYWELFVSENEAEHLEDIEVPKALGDIFESVAGAIYLDSGMSLE
AVWKAYYPMMKPEIENFSEKVPKSPIRVLLEKQPQSVKFGKPEINSGRRIRVTVEVFGLG
KFVGIGRNKRIAKCTAAKRALRALESEKRRKELERQRRLQDEFDNFSH
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaataattgcaaaaatttatcctcatctaattccgataatgtggttatttca
tcaaattcgaaaacgatgcataaattcggccatcgtaattcgatgaatcatcctacaact
cgtttgattcgttcttttgcattattcgataatcgagattttcttccgcgtccctttcag
attgaattatatgaagcatgcaagaatcgcgacacaattgtttttcttcgtccaggtcaa
ggaagatatttcatttcggtaatgctggttaaatatttcaatccacatctatcaccttcc
gatactgactccaaaactcttaagaagatatttttcctggctaagtcgccaagttccata
aaactttattcatccgttttcaatgcccattgtaatcttcgcattggtgaatacctagaa
actgaagatgctaaacaatggtcttgtgatatttggcgtgataaacttcaatcatatgat
attcatttaatgatggacgatcttttcgaatatctaatcgaacaggaattgattaatgcg
aaagatttaaatcttttaattttgaatgatgttcataaaattttactctgtacatcttca
accgacgattgctatacaagaataattagacgactgcgttcccagactaacgaaaaacaa
tataggattctcggactttctgcttcaatacttttggaagacgtttcctccaatgttttt
gaaaaaatgattgaacaaatcgaanaaaatctcggatgttcatgtgaaacttatgccgat
cttcgaatgatcagcaaatattcgattcaatgtcgtataaagcttcgatgttatccatca
ttattggcctctaaagaaaaatcggacattattcatgatgaaacaaaatatcgtatggct
ctgtttatgatccgaaattattctgggcaattttttaattttataacaaacgtttcgtta
gatggaggcatcaccactgaacaacttatcaatcatgaaactattgccaaaatgattgtt
gatattctctatatttttggaacgcttggtgaatggtgtgccctaaagttaatccagatg
gtaaatcgtgaattatatgatactatcctacttttggccaaaacaagatcaaattatctt
cgacttttgaatgctgctcattcaacattatgtttgattcgtaaatcaatattatcgtac
atggacgcaggcattgtggcgaaattagaaacttcatcaatgactagtgaatcggaatcg
cgattgacattatcacagtttctttcaatttctgcaccaaaacttcaccttttagcccat
gtattattcgaatatttcgaagaattgactagtccgtcgactcatcaaacatcacattct
tcatttacgttcccatccaatatatgttctttaatttatgtcgaaaaccgttcaatggcc
ctcgtcttggatgaatggttacgagaattggttgccatcactcgtgatgtcaattctgga
aagataagcattctcgagtttcttttgccagatcacgtgttcttggctgaagatgacgga
aagaatgaattgaaaaatttttactatcgaaagcatcaaaaatctttgcatgagattttc
tattatagacaacaagaagaaacgctccgaagatttcgtttagctcaacaatgtaatctt
ttgataaccacatcaatgtctgcagaaggtcttgatgtgaatcgttgcaatatggtcatc
tgttttgatccaccgaaaacatttcatcaatttattcaatctaaaggacgagttcgtgtt
gagtgcggacaatttttggttttggtagaaaaaagtgaccataaggaatatgtcgaaaaa
tttcttcaattttgtaacattgagagaattttcaccaaattagttccattgaacaatcaa
gtattcattgaaaatgaaccaagcaaatttgatttaatggccttggcatctatgcatttc
attaaaccaccacaatcaaaaccatctctgccagtttcaatgatacataaaccaagaaag
ttcgataaacagatcaatcaatctgtaaatgcaactttacaactcacattagaaaatgct
atatccattttaaaccgctattgcaacaagttaccgagtgatacatttactaaactggtt
ccgaattacaaaattgaaatcgttcattcacaagctgaatccagtgaaaatagcaacgaa
gttgttcctaaatatcgctgtcgactctatcttcctataaattctacatatcgagatgaa
attatgggggaaattcagccaacacaatcattggccaaacaatcggtagcattcgaagcg
gttaaaacattgagagaaataggagaattggatcagaatttctatcctgtcggaaaggaa
acaagtcgatatatagaaaaacttggtcttcaagattgttttatcagtgtccccaagggt
aatcaagtgttgcaacaacaacatcatcatagtcacggtccttatcatcagaaaggaaat
cgctacaatcgaattcaaaaccgtaatatagcatcaaaacgtcgtcaatattataataaa
aaagttgccgattctattcgtggaaacatctttcgacatgacgaatccactaatcattat
tattttcagtatttatatgaatttcagatgaaattaacatatcgattatccgaagaacac
aatactagaggacgccgcattattgatccggctgaaactacacgaacatttggaataatt
tcgccaaatagtttgccaacaatttgtgatttcaccatctataatcgatcgggagaaatc
accatatcgatcgtgcctataataatcactgattctgaaaatggttatgaaattaccgac
gaaaaacgtcagcaaattgaaaatttccaccaatatacatttgaaaatgttttaccatta
ggaaaatcttcacttcgtttcgatcgtcaaaatggttcaaatggaaattatctcattgtt
ccaatcaatttcaacgccgaacaggataatcaaaagacgattgattgggaattcttagaa
ttaatttggcaccacaaaaatgatcccaaatcatatgaccaaggtatacttcgtcaggat
gatgagaataaatttatttttgacgaacaactttatcgagatgcagtcgtcattccaaaa
tatcgaaaagataaacttcaagcattctattatgttgcggaaatttgtcattatcttacg
ccacaaagtccatttccagatcatgagtatcaaacttttgaaaagtactataatcaaaaa
tatggcaaacaaattaccaatcttcagcaaccattgcttgatgttgaccacacatcagca
cgtttaaacctgttgacccctcgttttttaaatcgtagaggtattcatctatcatcaata
aaatcctccgaccatcaatcaaaaagaaatcctcaacaaaaacaaattcttgtacctgag
ctatgttttattcatccatttccagcatcattttggcgtaaagcagtctgtttaccttgc
attttgtatcgcttaaatttgctattgattgctgaagaattgcgtttcaaaatagctaaa
gaagctaaaattggtgttgttgaattacaacaagaaaaaaaatggcccaagttagatttt
ggatggtctgttctagtagagcaatcgcgccaacagacgaaaatagaacacgaacaaaat
caattcgatccaatagtatcaaatgaaaaacaaaaagtcatttctgtatccaatccagac
gatgattttatcatcgatacttttgatccatcaatggctccaccaccttccaatgatctt
tttaccacaattgaaaatcaaaattgctcatcctatcctgctgagacaatcaataataat
tttattaattatgattcatgcagtagtgatataattccacaaattgaaattatcagtggt
ccgtttggctattctgataaaagttattctagtcaaagaccgattttgcccgagaatttt
atggatgatgattttgaagaagagagtgctatagttgaagttgacaatgaaaataatcca
atcgtcgaaccagctaaaacattgcctgttcgtgctggttcaccaacatattgggaagat
caagaaaattttgattcaaatataaaatcaaaatttgggccaaattttgattggagagtt
tatgaatcagatggaaatgatgatgattctaatagcgatgaattcaaaacatctaatacc
gaatttcggtttgattttgagaaattctgcgaagatattcaacattattccaaaatgcca
ggattagctgatgacatccaagataatgaacgtgattttgacgaatgtgatgattccaga
tgcacggagaatatggaaatgagttcatcaaagagaaaaagtactaagaccaacaataga
aagcagaagccaatgataacatcgctatcagatttggacgatgatgatgaaagtgatgaa
caaatcgatgatggttcctattcagattttgatctcaatgattctagcgacgattatgag
gaagatgaattagttgattctaattttgatgatgaagattcattcgatgacgatgaggac
gatgattatgatgatgaaggaggcgatgatgataattttacaaatagatattccagatgc
aaaaatcggaaaacaaagacagctatggatttaaaaattcaaaacttaacacaaacaatg
gatgcatatcaaacaaaatcggtcatttatgatatattgaaaattgaattactatatgat
tctcgacagattgagcagaaaagtctaaaatattattatcgtcaccgattctcattagct
gaacaacataccgaacatttgcgtaaacgaaaaattttcgatgaaatgtactatgatgaa
caaaaccaagtgctacaatgtgtcgccagaattcaaaataaacaaatggccgattcgaaa
catgaaagtgattctgttttctgtgatcctgaatatgatttaattgaaaatgacaaaaat
ttaaatcatatgaacctcaatcaaccattagtgtcagttttaatgaaaaaaatcgataca
agtttgttggaaatgatgaaaattaaacatgagattgaagatcaaaaaattgatcaacaa
gtacaaaaccgaagccaattcgtaaattttccagagaagaattcatcatctacaaaaatt
gaagtcaaattcggtgaattattgccaaatagagatgaaaatctgaccgaatttacttca
aatgataaaaatccgattgatctgtttcaagttcagcgacaattagctttacaaacatta
ccacgatggcttcaaatggaaaatacttccgacgatcagctgcagataggaccacatcca
agcttgatattgcaagcaatcacaatgtccaattcaagcgatggcattaatcttgaacgt
ttggaaactgtgggcgattcatttttaaagtattcaataacggcatttttattctgtatg
tgtcctgaattgaatgaagggaaattgtcatttttgcgtagcagacagatatcaaatata
aatctacatcgtttaggacagcgaataaatcttggtgaattaatgattgcttcgaaattc
gaaccagtcgataattggtgtccaccttcctatcaggctttagaaaatgtcgaacaagaa
tcatcggataatgttaaaacaacatcgaataaagtgccatataatttactgactcaacat
tcaattccgaataaatccattgccgattgtgttgaagcgttgatcggaacatatctaatt
tcttctggatctcagggcgctattcaattcatggattggcttggactcaaagtactaccg
aagggaatgaaaataataaccaaaaatttgccctacgaatcttctgcagaaaataaagat
gaatcttatcaaaaacatgaacgatggctaccacaacctcgatcaccattgatcattccc
aaacatctgcgaactgatgcagctaaagtaaaagaaattgaggacaaacttcaagaaaat
tattttaaacatcatctcgatcgttttgaaaaaattattggctatcaattccgggatcgt
gcttatttagtgcaagcattcacacacaattcttattatgaaaacacagtgaccgattgc
tatcaacgattagagtttcttggtgatgctgttcttgattatcttataacaagatatctt
tatgaagattctcgatgtcattcgcctggtactttgaccgatcttcgttcagcattagtt
aataacaccttttttgctgcattggctgtcaagtataattttcataaatatctcatgatg
ctttcttccgagctttatcgagttattgatggttttgttcgcaaatttaacatctattat
aatcaaaatgttgccaatggtgaatccaaaaagattctcagtgccataagcgattttcag
caaggcaacgaagatgaacatatggatgaaaattcttattcaaattataattattgggaa
ttgttcgttagcgaaaacgaagcggaacacttggaggatattgaagttccaaaagcttta
ggagatattttcgaatcggttgctggtgcaatttatttggattctggtatgagtttggag
gctgtttggaaagcctattatccgatgatgaaacctgagatagaaaatttcagtgaaaag
gtaccgaaaagtccgataagagtattattggagaaacagccacaaagtgtcaaatttgga
aaacctgaaatcaattctgggcgccgtattcgtgttactgttgaagtatttggtttgggt
aaatttgttggaattggccgcaataaacgaatagccaaatgtacggctgcaaaacgagct
ttgcgtgcacttgaaagtgaaaaacgtcgcaaagaattggaacgacaacgacgactacaa
gatgaatttgataatttttctcattaa
DBGET
integrated database retrieval system
