Dolichospermum flos-aquae: HGD76_07360
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Entry
HGD76_07360 CDS
T06652
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dfs
Dolichospermum flos-aquae
Pathway
dfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HGD76_07360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfs03400
]
HGD76_07360
Enzymes [BR:
dfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HGD76_07360
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HGD76_07360
DNA repair and recombination proteins [BR:
dfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HGD76_07360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QJB44040
UniProt:
A0A6H2BYB5
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All DBs
Position
complement(1491095..1491934)
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AA seq
279 aa
AA seq
DB search
MPELPEVETVRRGLNQLTLSQEITGGDVLLQRTIAYPVSVDEFINKIKGNTIATWHRRGK
YLLAELSSPSPSYLGVHLRMTGQLLWLTQDEPLHKHTRVRLFFGENQELRFVDQRTLGQM
WYVPGSMAVESIMTGLAKLAVDPFSPEFTVEYLADKLKKSRRPIKTGLLDQSMVAGLGNI
YADEALFKSGILPTTLCTELQLPKIELLRTAIIQVLSASIAVGGTTFSNFLSVKGVNGNY
GGEAWVYNRTGEPCKVCGNVIQRIKLGGRSSHFCSQCQS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcctgaagttgaaacagtccgtcggggtttaaatcaattaaccctgagt
caagaaatcacgggaggagatgtattgctacaacgcaccatcgcctacccggtttctgtt
gatgaatttattaacaaaattaaaggcaataccattgctacctggcatcgtcgtggtaaa
tatctcctcgctgaactttcctccccttcccccagttatttaggagttcacctccgcatg
accggtcagttactttggttaacccaagatgaacctttacataaacacaccagagtcagg
ttattttttggggaaaaccaagaattgcgctttgttgaccagcgcaccttagggcaaatg
tggtatgttcctggttctatggctgtagaaagtattatgacaggtttggcgaaattggca
gttgaccccttttccccagagttcactgtagagtatttagccgataaattaaaaaaatcc
cgtcgtcccattaaaactggattattagatcagtcaatggtggcaggattaggtaatatt
tatgcagatgaagctttgtttaaaagtgggattttaccaacaactctttgtacagaattg
caacttccaaaaatcgaacttttgcgaactgcaattattcaagttttatcagcgagtatt
gcggtaggtgggacaacttttagtaatttcttgagtgttaaaggcgttaacggtaattat
ggcggtgaagcgtgggtttataatcgcactggcgaaccttgtaaggtttgtggtaatgtt
atccagcgaattaagttaggtgggcgttctagtcatttttgttctcaatgtcaaagttaa
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