Dolichospermum flos-aquae: HGD76_08000
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Entry
HGD76_08000 CDS
T06652
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
dfs
Dolichospermum flos-aquae
Brite
KEGG Orthology (KO) [BR:
dfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfs03021
]
HGD76_08000
Transcription machinery [BR:
dfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HGD76_08000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
LexA_DNA_bind
HTH_Mga
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QJB44143
UniProt:
A0A6H2BY89
LinkDB
All DBs
Position
complement(1637269..1638225)
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AA seq
318 aa
AA seq
DB search
MKTAQSATDLVRTYLREIGRVPLLTHEEEIFYGKQVQRSTALHEIREGLAAQLGHEPTVE
EWAAASDIEVSELNQAIAVGEIAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITEKLNKIKKAQRQLSQ
GLGRAPTVAELSQELDLTPKQVREYLEKARLPLSLDLRLGDNYDTELGEMLEDTGATPED
FVMQTSLSYDLERIMSELTPQQKEVITLRFGLVDGQSLTLAKIGEVLNISRERVRQIERE
ALNKLRKSKATMNEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgctcaatcagccaccgacctcgtgcggacttacctgcgtgagattggccgt
gtgccactcctcacccacgaagaagaaattttttatggtaaacaggtgcaacgatctact
gctttgcatgagatccgggaaggtcttgctgcccagttaggtcatgaaccaactgtagaa
gaatgggcagcagcctctgatatagaagtatcagaattaaatcaggcgatcgctgttggt
gaaatagccaaacggaaaatggtagaagccaatctccgtttagttgtgtccgttgccaaa
aagtacattaaacgcaatgttgatttacttgacctcattcaagaaggcagcatcggaatg
caacgaggtgtagaaaaatttgaccccaccaaagggtacagattttctacctatgcctat
tggtggatacgtcaagctattactcgggcgatcgccgaaaaagcccggactattcgcttg
cccattcatattacggaaaaactcaacaaaattaaaaaagcccagcggcaactatcccaa
ggtctaggacgtgcgcccacagtagcggaattatcccaagagttagatttaacacccaag
caggtgcgagaatacttagaaaaagcccgtctgccattatctctagacttgcggttagga
gataactatgatactgaactgggagaaatgctagaagacacaggggcaacaccggaagat
tttgtcatgcaaacttccctctcctatgacttagaacggatcatgtcagaactcactccc
caacaaaaggaagtcattaccctccgctttgggttagtagatggacaatctttaactctg
gctaaaattggtgaagtcttgaatattagccgggaaagagtccgccaaattgaacgcgaa
gctttaaacaaacttcgcaaatctaaagccactatgaatgagtaccttgccagttag
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