Dolichospermum flos-aquae: HGD76_16335
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Entry
HGD76_16335 CDS
T06652
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dfs
Dolichospermum flos-aquae
Pathway
dfs03420
Nucleotide excision repair
dfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HGD76_16335 (pcrA)
03430 Mismatch repair
HGD76_16335 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfs03400
]
HGD76_16335 (pcrA)
Enzymes [BR:
dfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HGD76_16335 (pcrA)
DNA repair and recombination proteins [BR:
dfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HGD76_16335 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HGD76_16335 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
DEAD
AAA_30
AAA_12
ResIII
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QJB45506
UniProt:
A0A6H2C2S1
LinkDB
All DBs
Position
complement(3369195..3371522)
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AA seq
775 aa
AA seq
DB search
MTTNIDFLSHLNPSQRQAVEHHCGPLLVVAGAGSGKTRALTYRIANLILKHGVNPENILA
VTFTNKAAREMKDRIQRIFAEQLAISQHGKKFDLLTEYQQSLLKSEVYRTKIKDMWCGTF
HSLFSRILRFDIEKYQDEKGRKWDKNFSIFDESDVQSVIKEIVTKDLNLDSKKFEPKSVR
YAISNAKNQGFSPQQFESEQPNYRGRIIADVYNRYQDKLSQNNALDFDDLILIPTRLFQQ
NEKVLSYWYRKFCHILVDEYQDTNRTQYDLIQLLVTNGESRKSEWKWQNRSVFVVGDADQ
SIYSFRMADFTILLEFQENFGDGLADDDTRSMVKLEENYRSCENILQAANELIENNTQRI
DKILKATREPGEAIYCHKADEEMAEAAFVINQIRNLENQHPELNWGNFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMKFYDRKEIKDAVAYLRAINNPADTVSLLRVINTPRRGIGKAT
VDALVNASQQLGTTLWEILSDETSVNTLAGRSAKAVNNFAAMIYNRQEQIKVVPGSEILQ
GILEDSGYIKELQDQGTDESDNRISNVNELHNAMLQFQEENAGEDISLQAFLQSAALSSD
LDNLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLQDPSLLEEERRLCYVGI
TRAQERLFLSHARERRLYGSREPAMRSQFLDEIPAELLTTQNKVTRSSTKTTSATPSKQS
TSGIWQVGDRVLHKSFGLGEITHIFGEGNKVSVAIKFLSLGQKIVDPRVAQLQKV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaatattgatttcctgagtcatcttaaccctagtcaacgtcaagccgtagaa
caccactgcggaccattgttggtggttgctggtgctggttcgggtaaaacccgggcgctt
acttatcgcattgctaatttgattcttaaacatggtgttaatcccgaaaatatcctcgcg
gtgacgtttactaacaaagccgctagggaaatgaaggacagaattcaaaggatatttgct
gaacaattagccatatcgcaacatggtaaaaagtttgatttgctgacagaatatcaacaa
agcttactaaaatcagaggtttaccgcactaaaattaaagatatgtggtgtggaactttt
cacagtttattttcacggattctgcgatttgatatcgaaaaatatcaagatgagaaaggc
agaaaatgggataaaaacttttctatctttgatgaatccgatgtgcaaagtgtaattaaa
gaaatagttactaaagatttaaatttagatagtaagaaatttgaacccaagtctgtacgc
tacgccattagtaatgctaaaaaccaaggattctctccccaacaatttgaaagtgaacag
cccaattatcgcggtagaatcatagctgatgtctataatcgctatcaggataaactttcc
caaaataacgctttagattttgatgatttaattttaattccgacgagattatttcaacaa
aatgaaaaagttctaagttattggtatcggaaattttgtcatattctagttgatgaatat
caagataccaacaggactcaatatgatttaattcagcttttggtgacaaatggagaaagc
cgtaaaagtgaatggaaatggcaaaatcggtctgtgtttgtggttggtgatgctgaccag
tcaatttatagttttagaatggcagattttacgattttgctagaatttcaggaaaatttt
ggcgatggtttggcagatgatgatactcgttctatggtgaaattagaagagaattatcgt
tcttgtgaaaatattctccaagctgctaatgaattaattgaaaataacactcaacgcatt
gataaaattctcaaagccacaagagaaccaggggaagcaatttattgtcataaagctgat
gaagaaatggcagaagcggcttttgtgattaaccaaattagaaatttagaaaatcaacac
ccggaattaaattggggtaactttgcaattttatatcgaactaatgcccaatctcgacct
tttgaagaattattagtaaaatatcaaattccttatacggttgtgggaggaatgaaattt
tatgatcgtaaagaaattaaggatgctgtggcatatttaagggcaattaataaccctgct
gatactgtaagtttattacgggtgattaacacaccgcgcaggggcattggtaaggctact
gtggatgctttggtgaatgcttcccagcaattaggaacaactttatgggaaatattaagt
gatgaaacatctgtaaatactttagcaggacgttcggcgaaagctgtaaataattttgca
gccatgatttacaatcgtcaagaacaaatcaaagtagttcccggttcagagatattacaa
gggattttagaagattctggttatatcaaagaattacaagatcaagggacagatgaatct
gataatagaatcagtaacgtcaatgaattgcataatgctatgttgcaatttcaagaagaa
aatgctggagaagatatttctttacaggcatttttacaaagtgcggctttgagttctgat
ttagataatttaaaagaaggacaaacagcggtttcgttaatgactttacacgcttctaaa
gggttggagtttccggttgtctttttggtgggtttagaacaggggctttttccgggttat
cgttccttacaagatccttcattgttagaagaggaacgacgtttatgttatgttggtatt
actcgcgctcaagaacgtttattcttatcccatgccagagaaaggcgtttatatgggtct
agagaaccggcaatgcgatcgcaatttctcgatgaaataccagcagaattactgactacc
caaaataaagttacccggagttctactaaaactacctctgcaactcctagtaaacaaagc
acttctggaatttggcaagtcggtgacagagtattgcataagtcctttgggcttggggaa
attacccacattttcggagaagggaataaggtttctgtagcgattaaattcctgagttta
ggacaaaaaatagtagaccccagagtagcgcaattacaaaaagtttaa
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