Dolichospermum flos-aquae: HGD76_17280
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Entry
HGD76_17280 CDS
T06652
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dfs
Dolichospermum flos-aquae
Brite
KEGG Orthology (KO) [BR:
dfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfs03032
]
HGD76_17280 (topA)
03400 DNA repair and recombination proteins [BR:
dfs03400
]
HGD76_17280 (topA)
Enzymes [BR:
dfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HGD76_17280 (topA)
DNA replication proteins [BR:
dfs03032
]
Prokaryotic type
DNA Topoisomerases
HGD76_17280 (topA)
DNA repair and recombination proteins [BR:
dfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGD76_17280 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QJB45660
UniProt:
A0A6H2C2Y4
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All DBs
Position
3577990..3580620
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AA seq
876 aa
AA seq
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MSTLVIVESPTKARTIRNYLPKDYVVEASMGHVRDLPQSASEIPAAVKGEKWAQLGVNVE
ADFEPIYVVPKDKKKIVTQLKEALKGVTELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITKEAIQKALKDCRNIDEQVVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVIKERQRRDFHEGTYWDLKASLEQEKSPFSAVLVTLGGTKVATGSDFDSTTGR
ITAGRNVVLLNEEEAEALKARLEGKTWTVADMEERPVTRKPAPPFTTSTLQQESNRKLRL
SARDTMRVAQNLYEQGYITYMRTDSVHLSDQAITAARACVEQKYGKQYLSPQPRQYTTKS
KGAQEAHEAIRPAGSSFRTPQDTGLAGREFAVYDLIWKRTVASQMADSRQTQVTVQIQVE
DAGFRSSGKRIDFPGYLRAYVEGSDDPEAALEDQEVILPALKVGDHPKCNELEAVGHETQ
PPARYTEATLVKTLESEGIGRPSTYASIIGTIIDKDYAQLVNNALIPTFTAFAVTDLLEK
HFPDIVDPSFTSKMEQTLDEISTGEAQWLPYLKKFYLGEQGLETLVKERETEIDASKART
VELENLDAKVRIGKYGPYIEVTNGEEVITASIPKNLTPADLNPKQVEILLKQKISGPDQL
GRHPETGEPIYIKLGTYGPYVQLGDKTEENPKPKQASLLKGVTPETVTLDMAVGLLSLPR
ALGTHPETGGKVQASLGRFGPYVVHDQGKEGKDYRSLKSTDDVLTISLNRALELLAEPKK
GRAAAKSKSKEALRELGTHPEDESPVNIYDGPYGPYIKHGKTNASLPEGESVENITLSTA
IELLSAKASTKSPRKTTKSTATKSTTTRGKKKDAAS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcttgttatcgtcgaatctcccacaaaagctcgtaccattcgcaactaccta
ccaaaagactatgtggtagaagcttcaatgggtcatgtccgtgaccttccccagtcggcc
agtgaaattcccgcagccgtcaaaggggaaaaatgggcgcagcttggggtcaatgtagaa
gccgactttgaaccgatttatgtcgttcccaaagacaaaaagaaaattgtcactcagctt
aaagaagccctcaaaggtgtaactgaactgattttagccacagacgaagaccgggaaggg
gaaagtattagttggcatttataccaattgctcaagccgaaagtgccaacaaagcgcatg
gtctttcatgaaattaccaaggaagccattcaaaaagctttgaaagactgccgtaatatt
gatgagcaggtagttcgcgcccaagaaaccagaagaattttagaccgattagtaggatat
accctatcgccgctgctgtggaaaaaaattgcctgggggttatccgctgggcgagtgcaa
tctgtagcagtacgtctattagtaattaaagaacgccagcgtcgggatttccatgaaggc
acatactgggatttaaaagccagtctagaacaggaaaaaagtccctttagcgcggtttta
gtgactcttggcggtacgaaagttgccacaggcagcgattttgactcaaccactggcaga
attaccgccgggcgtaatgttgtattactcaacgaggaagaagccgaagccctaaaagcc
cgcctagaagggaaaacttggacagtggcggatatggaagaacgtcctgtcacccgcaaa
ccagcgccaccgttcactacttccacactgcaacaagaatctaaccgcaagttgcgctta
tcggcacgggatacgatgcgagtggctcaaaatttgtatgagcaggggtatattacctac
atgcggacagattcggtacatttgtccgaccaagcgattactgctgcccgtgcttgtgtg
gagcaaaaatatggaaaacaataccttagtccccaacctagacaatacacgaccaaatct
aaaggcgcacaagaagctcacgaagccattcgtcccgctggtagtagtttccgcacaccc
caagacacaggtttagctggacgagaatttgctgtttatgatttgatttggaagcgcacc
gtcgcctcacaaatggctgattctcgccaaactcaagttactgtgcaaatccaagttgaa
gacgctggttttcgttcctctggtaagcgcatagattttcctggctacctccgcgcctat
gtcgaaggttcggatgatcctgaagccgctttagaagaccaagaagtaattctacctgcg
ctgaaagttggtgatcatcccaaatgcaatgaactggaagcggtaggtcatgaaacccaa
cctcccgcccgttacaccgaagcaactttggtaaaaaccttagaaagtgaaggtattggt
cgtcctagtacctacgccagtattattggcacaatcattgataaagattatgcccaattg
gtgaataatgccctaattcccactttcacggctttcgctgtgactgatttactggaaaaa
cattttccagatattgttgaccctagttttacttctaaaatggagcaaaccttggatgaa
atttccacgggtgaagctcaatggctaccctacttaaagaaattttatcttggtgaacaa
ggtttagaaactttggtgaaggaacgggaaaccgaaattgatgccagtaaagctagaact
gtagaattagaaaatctagatgctaaagtccgcattggtaaatatggtccttatatcgaa
gttaccaatggtgaggaagtaattaccgcttctatccccaaaaacctcaccccggctgac
ctgaaccccaaacaggtggaaatcctcctcaaacaaaaaatttccggacctgaccaactc
ggtcgtcacccggaaactggagaaccaatttatatcaaacttggtacttatggtccttat
gttcaattaggcgataaaactgaggaaaatcctaagcctaaacaagcttctttactcaaa
ggtgtgacaccagaaaccgtcactttagatatggctgtgggtttattatctctcccccgt
gctttgggaactcaccccgaaactggtggcaaagtccaagctagtttaggaagatttggc
ccctatgttgtccatgaccaagggaaggaggggaaagattaccgttctctaaaatctacg
gatgatgtcttgacaatttccttgaatcgtgctttagaattattggcagaaccgaaaaaa
ggacgggctgctgctaagagtaagtctaaagaagctttacgcgagttgggtacgcatcca
gaagatgagtcaccagtcaatatctatgatggtccctatggtccttacattaaacatggg
aaaactaatgccagtcttcctgaaggtgaatcagtagaaaatatcacgctatctacagct
attgaattactttcagccaaagcatctacaaaatctccccgcaaaaccactaaatcaact
gctactaaatcaactactactagaggaaaaaagaaagacgcagcaagttag
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