Dactylosporangium fulvum: Dfulv_05630
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Entry
Dfulv_05630 CDS
T08473
Name
(GenBank) DEAD/DEAH box helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dfu
Dactylosporangium fulvum
Pathway
dfu03420
Nucleotide excision repair
dfu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dfulv_05630
03430 Mismatch repair
Dfulv_05630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfu03400
]
Dfulv_05630
Enzymes [BR:
dfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dfulv_05630
DNA repair and recombination proteins [BR:
dfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dfulv_05630
MMR (mismatch excision repair)
Other MMR factors
Dfulv_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UWP83747
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Position
1209911..1213252
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AA seq
1113 aa
AA seq
DB search
MTAASTSPRVEVGPRYTPVELAKLLRLPAPTVQQTAVIAAPVAPLLVVAGAGSGKTETMA
ARVVWLVANTHVRPEQILGLTFTRKAAGELSHRIRQRLGQLVRRLGRDDLIAGEPTVATY
HSYATRVVREHGVRAGFEPSTRLLTEAACWQLADAVVRAYDGDMTAVAAAPTTVVDAVLH
LAGDLAEHLREPADVAAWTGRFFAEIGGKTGKMAKPVRDVLSRQQARLQLLPLIRQYQEK
KALLEAMDFGDQLSRAARVACDHPEVGAVERDRFRVVLLDEYQDTSHAQVVLLRALFGEG
HPVTAVGDPCQSIYGWRGASAGTLDRFPTEFPAAPGVPAPELSLTTSWRNRPEILDVANT
LSQPLRAHGARVAELAPADRLAEPASTATVHCALLETFAEEAAWIADRVAASWRLAAKVD
PDTFPYDIPIEDRPSTAVLVRTRAQIPALENALRSRGLPVEVVGLGGLLDTPEVRDVVST
MRVLADPAEGAALLRILTGPRWRIGPRDLVALYRRARALAAARRASPDDEPDLADRLDEA
VLVEALDDPGDAEAYSPEGHRRFAALGLELRRLRRRLDQPLPDLVADIERVTGLDVEVAA
RPGDAGLARGHLDAFSNIAARFAAESEGATLSAFLAFLAAAENEERGLAPGEVEVVEGAV
QILTAHAAKGLEWDVVAVAGLCVDVFPGASNSGDHWLRGLGVLPFPLRGDHAGLPSLDLS
GVADIKGVVGRLDLFSREWREHDVREERRLAYVAVTRPRRLLLASGYWWGEGVKRARGPS
VFLEEIRERCLAGAGVVDAWAGAPAQDAQNPTASEVPSASWPADPLGARRPLLETAAVMV
RSAASALAAPSGEGTAGEEPPAPAEGGARGWSDAVLRDAAGRRWAAEADLLLAERARLTP
HFDGAVEVSLPGHLSVSQLVALRRDPQRFARSLRRPLPSRPDPYARRGTAFHHWLEQRFK
AERLLDLDELPGAADEGAAPDEALADLQTKFLASEWADRVPLDVEVPFASVIAGVVIRGR
MDAVYRYPDGRYDVVDWKTGGRPGGSDATAAAVQLAAYRLAWAELRGVPLEQVGAAFFYV
RDGVTVRPADLLDEEGLLALITRLPVGRAVDAQ
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgccagcacgtcgcccagggtcgaggtcggcccgcggtatacacccgtcgag
ctggcgaagctgctccgcctgccggcgccgaccgtccagcagaccgcggtgatcgccgcg
ccggtcgcgccgctgctcgtcgtggcaggtgccgggtccggcaagaccgagacgatggcg
gcccgcgtcgtctggctggtcgccaacacccacgtgcggccggagcagatcctcggcctc
accttcacccgcaaggccgccggcgagctgtcgcaccgcatccggcagcgcctcgggcag
ctggtccgccgcctcggccgcgacgatctcatcgccggcgagccgaccgtcgcgacgtac
cactcgtatgccacccgcgtcgtccgcgagcacggtgtgcgggccgggttcgagccgtcg
acccggctcctcaccgaggccgcgtgctggcagctcgccgacgccgtcgtgcgcgcctac
gacggcgacatgaccgccgtggccgcggcccccacgacggtcgtcgacgccgtgctgcac
ctcgccggggacctcgccgagcacctgcgcgagccggccgacgtcgccgcttggaccggc
aggttcttcgccgagatcggcggcaagacgggcaagatggccaagccggtgcgtgacgtc
ctctcccgccagcaggcccggttgcagctgttgccgttgatcaggcagtaccaggagaag
aaagcgctgctggaagccatggacttcggcgaccagctgtccagggcggcgcgggtggcg
tgcgaccacccggaggtcggggccgtcgagcgcgaccggttccgggtcgtgctgctcgac
gagtaccaggacacgagccacgcgcaggtcgtgctgctgcgcgcgctgttcggcgagggg
cacccggtcaccgcggtcggtgacccctgccagtccatctacggctggcgcggtgcctcg
gccggcacgctcgaccggttcccgacggagttcccggccgcacccggtgtgccggcaccg
gagctgtcgctgaccacgagctggcgcaaccggcccgagatcctcgacgtggccaacacc
ctgtcccagccgttgcgggcgcacggcgcgcgcgtcgccgagctggcaccggccgaccgc
ctcgccgagcccgcctcgaccgcgaccgtccactgcgcactgctcgagacgtttgccgaa
gaggccgcgtggatcgccgaccgggtggccgcctcgtggcggctcgcggcgaaggtcgat
ccggacacgttcccctacgacatcccgatcgaggaccggccgtcgaccgcggtcctggtg
cggacccgcgcgcagatccccgccctggaaaacgcgctgcgctcccgcggcctgccggtc
gaggtcgtcggcctcggcggcctgctcgacacgcccgaggtccgcgacgtggtgagcacc
atgcgggtcctcgccgacccggccgagggcgccgcgctcctgcgcatcctgaccgggccg
cggtggcgcatcgggccgcgtgatctcgtggcgctgtaccggcgggcgcgcgccctcgcc
gccgcgcgccgggcgtccccggacgacgagccggacctcgcggaccggctggacgaggcc
gtgctcgtcgaggcgctcgacgacccgggcgacgccgaggcgtattcgcccgaggggcac
cgccggttcgccgccctcgggctggagctgcgccggttgcgccgccggctcgaccagccg
ctgcccgacctggtcgccgacatcgagcgggtcaccggtctcgacgtcgaggtcgccgcc
cgccccggtgacgccggcctggcccgtggccacctcgacgcgttcagcaacatcgcggcc
cggttcgccgccgagtcggagggcgcgacgctgagcgcgttcctggcgttcctcgccgcc
gccgagaacgaggagcgcggtctcgcgcccggcgaggtcgaggtggtcgagggcgcggtg
cagatcctgaccgcccacgcggcgaagggcctcgagtgggacgtcgtcgctgtggccggc
ctgtgcgtcgacgtgttccccggcgcgagcaactccggcgaccactggctgcggggcctc
ggcgtcctgccgttcccgctgcgcggcgaccacgccgggctgccctcgctcgacctgtcc
ggcgtggccgacatcaagggtgtggtgggccggctggacctgttcagccgcgagtggcgc
gagcacgacgtgcgcgaggagcggcggctcgcctacgtggcggtgacgcgcccgcggcgg
ctgctgctcgccagcgggtactggtggggcgagggcgtgaaacgggcccgcggcccgtcg
gtgttcctggaggagatccgcgagcgctgcctggccggcgccggtgtggtcgacgcgtgg
gcgggggcgccggcgcaggacgcgcagaacccgacggcctccgaggttcccagcgcgagc
tggcccgccgacccgctgggcgcccgccggccgctgctggagacggccgcggtgatggtc
cgttcggcggcgtcggcgctggccgcaccgtcgggggagggcaccgccggggaggagccg
cccgcgcctgccgagggtggtgcccgcgggtggtccgacgcggtgctgcgggatgccgcc
gggcggaggtgggcggccgaggccgacctccttctcgccgagcgagcccggctgaccccg
cacttcgacggggccgtcgaggtgtcgctccccggccacctctcggtctcgcagctcgtg
gcactgcggcgggacccgcagcggttcgcccggtcactgcgccggccgctgccgtcccgc
ccggacccgtacgcccggcgcggcaccgccttccaccactggctcgagcagcggttcaag
gccgagcgcctccttgatctcgacgagttgcccggcgccgccgacgagggggccgcaccc
gacgaggccctcgccgacctgcagacgaagtttctggccagcgagtgggccgaccgggtg
ccgctcgacgtcgaggtgccgttcgcgtccgtgatcgccggggtggtgatccgcgggcgg
atggatgccgtctaccggtaccccgacgggcggtacgacgtggtcgactggaagaccggc
ggccggcccggcggcagtgacgcgacggcggcggcggtgcagctcgcggcgtaccggctg
gcgtgggccgagctccgtggcgtcccgctggagcaggtcggggccgccttcttctacgtc
cgcgacggggtgacggtccgcccggccgacctgctcgacgaggaaggtcttctggcgctg
atcacccggctcccggtcggccgggctgtcgacgctcaatga
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