Dactylosporangium fulvum: Dfulv_08185
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Entry
Dfulv_08185 CDS
T08473
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dfu
Dactylosporangium fulvum
Brite
KEGG Orthology (KO) [BR:
dfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfu03009
]
Dfulv_08185 (rimO)
Enzymes [BR:
dfu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dfulv_08185 (rimO)
Ribosome biogenesis [BR:
dfu03009
]
Prokaryotic type
ribosomal protein modification factors
Dfulv_08185 (rimO)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UWP84204
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Position
1756490..1757917
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AA seq
475 aa
AA seq
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MSTNADRRVALLTLGCARNEVDSEELAARLADGGWSVTTDGNDADVVLVNTCGFVAKAKQ
DSIDTLLAAADTGAKVVATGCLAERYGQELAGELPEAHAVLGFDHYPDMAARLDAILAGE
TIPSHAPRDRRTLLPITPVERRTAQVVTPGHLPAHLRGVLRQRLDSGPVAPLKLASGCDR
RCSFCAIPAFRGAFVSRTPDEVLAEAEWLAANGVRELVLVSENSTSYGKDLGDPRLLEKL
LPQLAAVRDIVRVRVSYLQPAETRPGLVEAIATTPGVAPYFDLSFQHSSEPVLRRMRRFG
STERFLDLLDSVRRFDPDAGARSNVIVGFPGETREDIDELARFLTEARLDAVGVFDYSDE
DGTEAATLPDKVPADTIKKRYDWMSALAEELCAQRAGDRVGSIVEVLVDYIDEEVVEGRG
AHQAPEVDGSTTLVAGAGLDPATLHPGDFVRAKVTESVGVDLVAMPIEMISPATP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacgctgaccgccgcgtagccctgctcactctcggctgtgcccgcaacgag
gtggactccgaggagctcgccgcccgcctcgccgacggcggctggtccgtcaccaccgac
ggcaacgacgccgacgtcgtgctggtcaacacctgcggttttgtcgccaaggccaagcag
gactcgatcgacaccctgctggccgcggccgacaccggcgccaaggtggtggcaaccggc
tgcctcgccgagcgatacgggcaggagctggcgggcgagctgcccgaggcgcacgccgtg
ctgggcttcgaccactacccggacatggccgcccgcctcgacgcgatcctcgccggcgag
acgattccgtcacacgcgccgcgcgaccggcgcaccctgctgccgatcacgccggtcgag
cggcgcacggcccaggtcgtgacgcccgggcacctgccggcgcacctgcgcggtgtgctg
cggcagcggctcgactccggccccgtcgcacccctgaagctggccagcggctgcgaccgg
cgctgctcgttctgcgcgatcccggcgttccgtggcgcgttcgtgtcccgcacgccggac
gaggtgctcgccgaggccgagtggctggccgccaacggcgtgcgcgagctggtgctcgtg
agtgagaactcgacgtcatacggcaaggacctcggcgacccccgcttgctggagaaactg
ctgccgcagctcgcggcggtgcgggacatcgtgcgggtccgcgtctcctacctccagccc
gccgagacccgccccggcctggtcgaggccatcgccaccacgcccggcgtcgcgccctac
ttcgacctgtcgttccagcactccagcgagcccgtgctgcgtcgcatgcgccggttcggc
tcgaccgagcggttcctcgatctcctcgacagcgtccggcggttcgaccccgacgcgggc
gcccgcagcaacgtcatcgtcggcttccccggcgagacccgcgaggacatcgacgagttg
gcccggttcctgaccgaggcgcggctcgacgcggtcggcgtcttcgactacagcgacgag
gacggcaccgaggccgccaccctgccggacaaggtccccgccgacacgatcaagaagcgg
tatgactggatgagcgccctggcggaggagctgtgcgcccagcgcgccggcgaccgggtc
ggctcgatcgtcgaggtgctggtggactacatcgacgaggaggtcgtcgaggggcgcggc
gcccaccaggcgcccgaggtcgacggctccacgacgctcgtcgccggcgccgggctcgac
ccggcgaccctgcatccgggcgacttcgtgcgggccaaggtcaccgagagtgtcggcgtc
gacctggtcgcgatgccgatcgagatgatcagtccggcgacaccatga
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