Dactylosporangium fulvum: Dfulv_11945
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Entry
Dfulv_11945 CDS
T08473
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dfu
Dactylosporangium fulvum
Pathway
dfu03030
DNA replication
dfu03430
Mismatch repair
dfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dfulv_11945 (dnaE)
03430 Mismatch repair
Dfulv_11945 (dnaE)
03440 Homologous recombination
Dfulv_11945 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfu03032
]
Dfulv_11945 (dnaE)
03400 DNA repair and recombination proteins [BR:
dfu03400
]
Dfulv_11945 (dnaE)
Enzymes [BR:
dfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dfulv_11945 (dnaE)
DNA replication proteins [BR:
dfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dfulv_11945 (dnaE)
DNA repair and recombination proteins [BR:
dfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dfulv_11945 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UWP84892
LinkDB
All DBs
Position
2558452..2561985
Genome browser
AA seq
1177 aa
AA seq
DB search
MADSFVHLHVHTEYSMLDGAARLKEMFAEANRLGMPAVAITDHGNMHGAYDFYKQAKAAG
VTPILGVEAYVAPESRLTKQRIRWGRPDQKDDDVSGSGGYTHKTIWARNKTGLHNLFRLN
SRASIEGHFVKWPRMDAEIIAEHADGLMATTGCPSGEVQTRLRLDQFDEALKAAAKYQEI
FGRENYFLEVMDHGLDIERRVRAGLIEISKRLNIPPVVTNDSHYTHEAQAEAHDVLLCVQ
TASNVNDPNRFKFGGSGYYLKSADEMRAVDSSDLWQEGCRNTLLVAEKVDTAGMFESRNL
MPRFPVPEGETEESYFRAEVWRGMERRFPNGIDEEHRQQAEYEADMIVKMGFPAYFLVVS
DFILWAKKEGIAVGPGRGSAAGSLVAYAMGITDLDPLPHGLIFERFLNPDRISMPDIDID
FDERRRGDVIRYVTEKWGEDRVAQIATFGTIKAKAAIKDSARVLGYPFAVGDRITKAMPP
AVMGKDIPLSGIFDPNHPRYSEAVEFRQLYEGDPDVRKVVDTAKGLEGLIRQTGVHAAGV
IMSAEPLIEHVPLMRRDADGAIITQFDYPTCETLGLLKMDFLGLRNLTIIDDAVKNIEKN
HGIKVDLLSLSLDDKAAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGANSHTNYALRKNGQQEMIPIHPELEEPLKEILGPTYGLIVYQEQVQRAAQKLAGY
TLGQADLLRRAMGKKKKEVLEKEFVPFRDGMRNNGYSDEAIQKLWDVLVPFADYAFNKAH
TAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKMALYLSECRRMGIEVLPPDVNESA
GPFTPVGKDIRFGLAAVRNVGHNVVDAIVRCRHAAPYKDFHDFLSKVDAVACNKKTVESL
IKAGAFDSMGHPRRGLLAIHADAIDAYVDIKKNEAIGQFDLFGDAFATDDGGGTGPAMTQ
PIPEIEWDKRELLTFEREMLGLYVSDHPLFGLESVLSKTADTAISSLSEEGAVPDGAVIT
LAGMLTGVQRRITKQGKPWASATLEDLGGAVEALFFPNTYELVGQYIAEDAIVAVKGRVD
RRDETPRLMAMDLSIPDVTTADENRPVVLSLPANRCTPPLVDRLKEILTNHPGKAEVHVK
LSHGSRITLLRLGPYRVDPTTALKGDLKALLGPNSFS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcgttcgtgcatctccacgtgcacaccgagtactccatgcttgacggagcg
gcacggctcaaggagatgttcgccgaggccaaccggctcggcatgcccgccgtcgcgatc
accgaccacggcaacatgcacggggcgtacgacttctacaagcaggccaaggccgccggc
gtgactccgatcctcggcgtcgaggcctacgtggcacccgagtcccggctgacgaagcag
cggatccgctggggccggccggaccagaaggacgacgacgtctccggctccggcggctac
acgcacaagaccatctgggcccgcaacaagaccggcctgcacaacctgttccggctcaac
tcccgggcgtcgatcgagggccacttcgtgaagtggccgcgcatggacgcggagatcatc
gccgagcacgccgatggcctgatggccacgaccggctgcccgtcgggtgaggtgcagacc
cgcctgcggctcgaccagttcgacgaggcgctgaaggcggcggcgaagtaccaggagatc
ttcggccgggagaactacttcctcgaggtcatggaccacggcctcgacatcgagcggcgg
gtccgggccggcctgatcgagatctccaagcggctcaacatcccgccggtggtcaccaac
gactcgcactacacccacgaggcgcaggccgaggcgcacgacgtgctgctgtgcgtgcag
accgcgtccaacgtcaacgaccccaaccggttcaagttcggcggctccggctactacctc
aagtcggccgacgagatgcgcgccgtcgactcgtccgacctgtggcaggaggggtgccgc
aacaccctcctggtcgccgagaaggtcgacaccgccggcatgttcgagtcgcgcaacctc
atgccgcggttcccggtgccggagggcgagaccgaggagtcgtacttccgcgccgaggtc
tggcggggcatggagcggcgcttcccgaacggcatcgacgaggagcaccggcagcaggcc
gaatacgaagccgacatgatcgtcaagatgggcttcccggcgtacttcctcgtcgtctcc
gacttcatcctgtgggccaagaaggaaggcatcgcggtcggccccggccgtggctcggcc
gccggcagcctggtcgcctacgcgatgggcatcaccgacctcgatccgctgccgcacggg
ctgatcttcgagcggttcctcaaccccgaccgcatctcgatgcccgacatcgacatcgac
ttcgacgagcgccggcgcggcgacgtcatccggtacgtcaccgagaagtggggcgaggac
cgggtcgcgcagatcgcgacgttcggcacgatcaaggcgaaggccgccatcaaggactcg
gcgcgggtgctgggctatccgttcgcggtcggtgaccgcatcaccaaggcgatgccgccg
gcggtgatgggcaaggacatcccgctgtcgggcatcttcgaccccaaccacccgcggtat
tccgaggcggtcgagttccggcagctgtacgagggcgaccccgacgtgcggaaggtcgtc
gacaccgcgaagggcctggagggcctgatccgccagacgggtgtgcacgccgccggtgtc
atcatgtccgccgagccgctgatcgagcacgtgccgctgatgcgccgcgacgccgacggg
gcgatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctgaagatggac
ttcctcggcctgcgcaacctgacgatcatcgacgacgccgtcaagaacatcgagaagaac
cacggcatcaaggtcgacctgctgtcgctgtcgctggacgacaaggccgcctacgagctg
ctggcccgcggcgacacgctcggcgtgttccagctcgacggcgggcccatgcggtccctg
ctgcggctcatgaagccggacaatttcgaggacatctccgcggtgctggcgctctaccgg
cccggcccgatgggtgccaactcgcacaccaactacgcgctgcgcaagaacggccagcag
gagatgatcccgatccacccggagctggaggagccgctcaaggagatcctcggcccgacc
tacggcctgatcgtctaccaggagcaggtccagcgcgccgcgcagaagctcgccggctac
acgctcggccaggccgacctgctgcgccgggcgatgggcaagaagaagaaagaggtcctg
gagaaggagttcgtgccgttccgcgacggcatgcgcaacaacggctacagcgacgaggcc
atccagaagctgtgggacgtgctcgtcccgttcgccgactacgccttcaacaaggcccac
accgccggctacggcctggtgtcgtactggacggcgtacctcaaggccaactacccggcc
gaatacatggccggcctgctgaccagcgtcggcgacgacaaggacaagatggcgctctac
ctgtcggagtgccgtcgcatgggcatcgaggtgctcccgcccgacgtcaacgagtcggcc
ggcccgttcaccccggtcggcaaggacatccgcttcggcctggcggccgtgcgcaacgtc
ggccacaacgtcgtcgacgcgatcgtgcggtgccgccacgccgcgccgtacaaggacttc
cacgacttcctgtccaaggtggacgccgtcgcctgcaacaagaagacggtcgaatcgctg
atcaaggccggcgcgttcgactcgatggggcatccgcggcgcggcctgctcgcgatccac
gccgacgccatcgacgcctacgtcgacatcaagaagaacgaggccatcggccagttcgat
ctcttcggcgacgcgttcgccaccgacgacggcggcggcacgggcccggcgatgacccag
cccatcccggagatcgagtgggacaagcgggaactgctcaccttcgagcgggagatgctc
ggcctgtacgtctccgaccacccgctgttcggcctggagtcggtgctgtcgaagaccgcc
gacacggcgatcagcagcctctcggaggagggcgccgtccccgacggcgcggtgatcacg
cttgccggcatgctcaccggcgtccagcgccggatcaccaagcagggcaagccgtgggcg
tcggcgacgctggaggacctgggcggcgccgtcgaggcgctgttcttccccaacacgtac
gagctggtcggccagtacatcgccgaggacgcgatcgtcgcggtgaagggccgcgtcgac
cgccgcgacgagacgccccgcctgatggccatggatctgtcgatccccgacgtcactacc
gccgacgagaaccggccggtcgtgctgtccctgccggcgaaccggtgcacaccgccgctc
gtagaccggctcaaggagatcctgaccaaccacccgggcaaggccgaggtccacgtgaag
ctgagccacggctcgcggatcaccctgctgcgcctcggcccgtatcgggtcgacccgaca
acggccctcaagggtgacctcaaggcgctgctcggcccgaacagcttctcatag
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