Dactylosporangium fulvum: Dfulv_29460
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Entry
Dfulv_29460 CDS
T08473
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dfu
Dactylosporangium fulvum
Pathway
dfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dfulv_29460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfu03400
]
Dfulv_29460
Enzymes [BR:
dfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Dfulv_29460
DNA repair and recombination proteins [BR:
dfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dfulv_29460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
AAA_22
PhoH
AAA_16
nSTAND3
NPHP3_N
UvrD_C
PIF1
NACHT
ABC_tran
RsgA_GTPase
UvrD-helicase
AAA
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UWP79285
LinkDB
All DBs
Position
complement(6372361..6374628)
Genome browser
AA seq
755 aa
AA seq
DB search
MDTTPPERSGATLDAVLERITYVNEETGYTIARVAAERSGSDLLTVVGSLLGVQPGESLR
LVGRWGNHPRYGRQFEVHSFTTVLPATVQGIERYLGSGLIKGIGPRMAARITGHFGADTL
RVVEEEPERLVEVPGLGPKRTAMIGAAWQEQRAIKEVMVFLQGVGVSTSLAVRIYKQYGD
ASISVVRNEPYRLAGDVWGIGFRTADTIAQAVGIPHDSPQRIQAGIQYTLSEAADGGHCF
LPEPNLVADAAEILGVPAELVRPELDALAAADGVVREPVPNPGNPGSTIPAVYLVPFHRA
ETSLAGGLLRLLSAPADRLSAFADVDWAKALVWLRGRTGADLAAEQEEAVRAALTSKVAV
LTGGPGCGKSFTVRSIVTLAAAKRAKILLAAPTGRAAKRLTELSGHPATTVHRLLQLRPG
GDASYDRDNPLDADLVVVDESSMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEVL
RDLLAAETIPRVRLTRIFRQAGESGVVVNAHRINAGQAPVFGEHPDFFWFGADEPEPAAE
VVVDLVARRIPRRFGIRPADIQVLTPMHRGPAGAGGLNTVLQEALAPHREGTPERRQGAR
VFRPGDKVIQIRNNYEKGTAGVFNGTVGVVTDLSVVDRKLTVRTDEDELLDYDFDELDEL
QHAYAITVHRSQGSEYPAVVVPLTMSSYTLLQRNLLYTAVTRAKRLVVLVGNRKALAIAV
RATGSGRRHTSLTHRLRTTPWSAGGSSRRSAAGGT
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgacaccgccggagcgctccggcgcgaccctcgacgcggtgctggagcggatc
acctacgtcaacgaggagaccggatacacgatcgcgcgggtcgcggccgaacgctcgggt
tccgacctgctcaccgtcgtcgggtcgctgctcggcgtccagcccggggagagcctgcgc
ctggtaggccgctggggcaaccatccgcggtacggccggcagttcgaggtccactccttc
accaccgtcctgcccgcgaccgtccagggcatcgagcggtacctcggttccggcctcatc
aagggcatcggcccccggatggcggcccgcatcaccgggcacttcggcgccgacacgctg
cgggtcgtcgaggaggagccggagcgcctcgtcgaggtgccgggcctgggcccgaaacgc
accgcgatgatcggcgcggcctggcaggagcagcgcgccatcaaggaggtcatggtcttc
ctccagggcgtcggcgtgtccacgtcgctggcggtgcgcatctacaagcagtacggcgac
gcgtcgatctcggtcgtgcgcaacgagccctaccggctggccggcgacgtctggggcatc
ggattccgcacggccgacacgatcgcgcaggcggtcggcatcccgcacgacagcccacag
cgcatccaggccggcatccagtacacgctgtcggaggcggccgacggcggccactgcttc
ctgccggagccgaacctggtcgccgacgcggccgagatcctcggcgtgccggccgagctc
gtccgccccgagctggacgcgctggccgccgcggacggcgtggtccgtgagccggtgccg
aaccccggcaatcccggcagcaccatcccggcggtctacctggtgccgttccaccgcgcc
gagacgtcgctggccggcggcctgctacggctgctgagcgcccccgccgaccggctgtcg
gccttcgccgacgtggactgggccaaggccctggtgtggctgcgcggccgcaccggcgcc
gacctggcggcggagcaggaggaggcggtacgggcagcgctcacctcgaaggtggccgtg
ctcaccggcggccccggttgcggcaagtcgttcaccgtccggtcgatcgtcaccctggcc
gcggcgaagcgggcgaagatcctgctggcggcgcccaccggccgagccgcgaaacgcctc
accgagctgtccgggcatcccgcgaccaccgtccaccggctgctgcagctgcggcccggc
ggcgacgcgtcgtacgaccgggacaacccgctcgacgccgacctggtggtcgtcgacgag
tcgtcgatgctcgacctgctgctggcgaacaagctggtcaaggccgtgccgccgggtgcg
cacctgctgctggtcggcgacgtcgaccagctgccgtcggtcggcgcgggcgaggtgctg
cgggacctgctggcggccgagacgatcccgcgggtccggctgacgaggatcttccggcag
gccggggagtccggcgtggtggtcaacgcccaccgcatcaacgccggtcaggctcccgtg
ttcggcgagcacccggacttcttctggttcggcgccgacgagcccgagccggccgcggag
gtcgtggtggacctggtggcccggcgcatcccccgccgcttcggcatccggcccgcggac
atccaggtgctgaccccgatgcatcgcggcccggccggtgccggcgggctcaacaccgtg
ctgcaggaggcgctcgcgccgcaccgggagggcacgccggaacggcggcagggcgctcgg
gtgttccgccccggcgacaaggtcatccagatccgcaacaactacgagaagggcacggcg
ggcgtgttcaacggcaccgtcggcgtcgtcaccgacctgtccgtcgtcgaccggaagctg
acggtccgcaccgacgaggacgaactgctcgactacgacttcgacgagctcgacgagctg
cagcacgcctacgcgatcaccgtgcaccgctcgcagggcagcgagtatccggccgtcgtg
gtgccgttgacgatgagttcgtacacgctgctgcaacgcaacctgctctacacggcggtc
acccgcgccaagcgcctcgtcgtgctggtcggcaaccgcaaggccctcgccatcgcggtg
cgggccaccggctccggccgccgccacacctcgctcacccaccgcctgcgcactacgccg
tggagcgcaggcggatcatcgcgccggtctgctgcgggtggaacgtga
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