Dactylosporangium fulvum: Dfulv_44710
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Entry
Dfulv_44710 CDS
T08473
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dfu
Dactylosporangium fulvum
Pathway
dfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dfulv_44710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfu03019
]
Dfulv_44710
03400 DNA repair and recombination proteins [BR:
dfu03400
]
Dfulv_44710
Enzymes [BR:
dfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dfulv_44710
Messenger RNA biogenesis [BR:
dfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dfulv_44710
DNA repair and recombination proteins [BR:
dfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dfulv_44710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
UWP87713
LinkDB
All DBs
Position
9693456..9695552
Genome browser
AA seq
698 aa
AA seq
DB search
MGVRQEASVVLKKLAGPSAELREDQWIAIEALVGRHRRVLCVQRTGWGKSAVYFVATALL
RARGAGPTVIVSPLLALMRNQVDAAARAGITARTINSANLEEWDEITAEITAGAVDVLLV
SPERLNNPDFRDNVLPKLAATTGLLVVDEAHCVSDWGHDFRPDYRRLRTLLLDLAPGTPV
LATTATANARVTEDVAEQLGDALVLRGSLDRESLRLGSLTLPSAAHRLAWLADHLRDLPG
SGIIYTLTVAGAHEAAAYLRGQGYEVAAYTGQSEDSDRRAAEADLLDNRIKALVATSALG
MGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRAVRKADVLLLPGTEDAAIWRYFASLAFP
PEEQVRAVLDVLAAADRPLSTAALEPRVELRRNRLELMLKVLDVDGAVRRVRGGWESTGL
TWEHDTARYARISEARAAEQESMRQYAALTSCRMEYLRSLLDDPAATPCGRCDNCAGAWY
STEVSGDALASARAHLGRAGVEIAPRRMWPTGLSAIGVSLSGKIPAGEQALPGRAIGRLS
DLGWGDKLRRLLASPDGPVPDDVFAGVVATLAEWAKGEDRWPERPAGVVVVGSHSTPRLV
ESLGERIAEVGRLPLLGTVTPSASADAASRTNSAQRVRALHAAFTVPPSLASRLPTLTGP
VLLVDDLVDSGWTMAIVARLLRQSGAPAVLPFALALSA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
ctgggtgtgcgtcaggaagcgtctgttgttctgaagaagctcgctggtccttccgctgag
ttgcgggaggaccagtggatagccatcgaggccctggtcggccggcatcgccgggtgctg
tgcgtgcagcgcaccggctggggcaagtccgcggtctacttcgtggcgaccgcgctgctg
cgcgcccgcggcgccggcccgaccgtgatcgtgtcgccgctgctcgccctgatgcgcaac
caggtcgacgccgccgcgcgggccggcatcaccgctcgcacgatcaactccgccaacctg
gaggagtgggacgagatcaccgcggagatcacggccggcgccgtcgacgtgctgctggtg
agccccgagcggctcaacaaccccgacttccgtgacaacgtcctgcccaagctcgccgcc
accaccggcctgctggtcgtcgacgaggcgcactgcgtctccgactggggccacgacttc
cgccccgactaccggcggctgcgcaccctgctgctcgacctggcccccggcacgccggtg
ctcgcgaccaccgcgaccgccaacgcccgggtcacggaggacgtggccgagcaactcggc
gacgccctggtgctgcgcggctccctcgaccgcgagtcgctgcggctgggctcgctcaca
ctcccctcggccgcacaccggctcgcctggctcgccgaccacctgcgggacctgccgggc
tccgggatcatctacacgctgaccgtcgccggcgcacacgaggcggccgcctacctgcgc
ggccagggctacgaggtggcggcctacacgggccagtccgaggacagcgaccgccgcgcc
gccgaggccgacctcctcgacaaccggatcaaggcgctcgtcgcgacatcggcgctcggc
atgggcttcgacaagcccgacctcggttttgtggtgcacctgggcgccccgtcctccccg
attgcgtactaccagcaggtgggccgcgcgggccgggccgtgcgcaaggccgacgtgctc
ctgcttccaggcaccgaggacgccgccatctggcgatacttcgcgtcgctggccttcccg
ccggaggagcaggtgcgtgccgtcctcgacgtgctcgccgccgccgaccgcccgctgtcc
acggccgccctggagccccgggtcgagctgcgccgcaaccggctggagctgatgctgaag
gtcctcgacgtcgacggcgcggtccggcgggtgcgcggcggctgggagtcgaccggcctc
acgtgggagcacgacacggcgcgctatgcgcggatctccgaggcccgcgcggcggagcag
gagtcgatgcggcagtatgcggcgctgacgtcgtgccggatggaatacctgcgctcgctg
ctcgacgacccggcggcgaccccgtgcgggcgctgcgacaactgcgccggggcctggtat
tcgaccgaggtgtcgggcgacgcgctcgcaagcgcccgggcacacctgggccgggccggc
gtcgagatcgctccgcgtcgcatgtggccgacgggcctgtccgccatcggcgtgtcgttg
tcgggcaagatcccggccggcgagcaggccctgccgggccgcgcgatcggccggctcagc
gacctgggctggggcgacaagctccgccgcctgctggcctcccccgacggcccggtcccc
gacgacgtcttcgcgggcgtggtcgccaccctggccgagtgggcgaagggcgaggaccgc
tggcccgagcgcccggccggtgttgtggtggtcggctcgcacagcaccccacggctggtc
gagtcgctgggcgagcgaatcgccgaagtcggccgcctgcccctcctcggcacggtcacc
ccgagcgcctcggcggacgcggcttcacgcacgaacagcgcccagcgcgtccgcgccctg
cacgccgccttcacggtccctccgtcgctcgcgtcccgcctgcccacgctgaccggcccg
gtgctgctggtcgacgacctggtcgacagcggctggaccatggcgatcgtcgcccgcctg
ctccgccagtccggcgccccggccgtcctcccgttcgcgctggccttgtccgcctga
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