Deinococcus grandis: DEGR_01680
Help
Entry
DEGR_01680 CDS
T06640
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dga
Deinococcus grandis
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dga03032
]
DEGR_01680
03400 DNA repair and recombination proteins [BR:
dga03400
]
DEGR_01680
Enzymes [BR:
dga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DEGR_01680
DNA replication proteins [BR:
dga03032
]
Prokaryotic type
DNA Topoisomerases
DEGR_01680
DNA repair and recombination proteins [BR:
dga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DEGR_01680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBN93435
LinkDB
All DBs
Position
182582..183634
Genome browser
AA seq
350 aa
AA seq
DB search
MTSRTQILAGEYLRREGSDPKKFKYFWPDGTPYRDKTGIERIAKLAVPPAYVDVYVSPDA
DAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLTRFAGALGQLKAITGADLRAQGLPP
RKVAALMTRLLHVARFRVGSDIYAHQHKTYGLSTLRQRHVNVEGNTVTFHFKGKHGITQH
KATTDRTLATNIGRLLDLPGPWLFQTVDEGGNRRRVRSGELNAYLKEVIGPFTAKDFRTW
GGTLLAAEYLAEAGVADTEKQARQTLVDCVKYVAADLGNTPAVTRSSYICPVIFDRYLEG
KILDDYEPRATKGESDLDGLTRSEAALKRLLESEKTLRPRRKKAAQGTLS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccgcacccagatcctcgccggggagtacctgcgccgcgaaggcagcgacccc
aagaagttcaaatacttctggcccgacggcaccccgtacagagacaagaccggcatcgaa
cgcatcgcgaaactcgccgtgccgcccgcctacgtggacgtgtacgtcagtcccgacgcg
gacgccgaacttcaggccttcggccgcgacgccgccggacgcctccagtaccgctaccac
ccggacttcgtgcaggcgggcgcgctgaagaaatggcagcgtctcacccgcttcgccgga
gccctcgggcagctcaaggccatcaccggggccgacctgcgcgcccagggcctccccccc
cgcaaggtcgccgccctcatgacccgcctgctgcacgtcgcccgtttccgcgtcggcagt
gacatctatgcccaccagcacaagacctacggcctcagcaccctgcgccagcggcacgtg
aacgtcgaggggaacaccgtcaccttccacttcaagggcaagcacggcatcacccagcac
aaggccaccaccgaccgcaccctcgccacgaacatcggccgcctgctcgacctccccggc
ccctggctgttccagaccgtggacgaaggaggcaaccgtaggcgcgtccgcagcggcgaa
ctcaacgcgtacctgaaggaagtcatcggcccgttcaccgccaaggacttccgcacctgg
ggcggcaccctcctcgccgccgaatacctcgccgaagcgggcgtcgccgacaccgagaaa
caggcccggcagaccctcgtcgactgcgtcaaatacgtcgccgccgacctcgggaacacc
cccgccgtcacccgcagctcctacatctgccccgtcatcttcgaccgctacctcgaaggc
aagatcctcgacgactacgaaccccgcgccacaaagggcgagagcgacctcgacggcctg
acccgcagcgaagccgccctgaaacgcctgctggaaagcgagaagacactcaggccccgg
cggaaaaaagcggcgcaggggactctcagctga
DBGET
integrated database retrieval system
