Deinococcus grandis: DEGR_02090
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Entry
DEGR_02090 CDS
T06640
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dga
Deinococcus grandis
Pathway
dga00730
Thiamine metabolism
dga01100
Metabolic pathways
dga01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DEGR_02090 (thiC)
Enzymes [BR:
dga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DEGR_02090 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BBN93476
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Position
222180..224054
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AA seq
624 aa
AA seq
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MTTLTPPPTDPMTEALTILDPELTAPFPNSEKVYLTGTLHAGVRVPARRIRQSPTLERVG
DLTRTVPNPALLVPDTSGPYTDARLSVDLRAGLGHARPWLAGDARLDLARERHHPALDVS
GPLPFPRVPRPRRARPGAGITQLQAARRGEITPEMEFVALREALRQDPDFDLTHQHPGQA
FGAAIPREITPEFVRSEVARGRAVIPANINHPELEPTVIGRNFRVKINANLGTSIVTSSI
EEEVGKMIWATRWGADTVMDLSTGRHIHPTREWIVRNSAVPVGTVPIYQALEKVGGVAED
LTWDVYRDTLIEQAEQGVDYMTVHAGARLAHLPLTARRRTGIVSRGGSILAKWCLAHHRE
NFLHTHFADICEILAAYDITFSLGDGLRPGSVEDANDAAQFAELDTLGELTRVAWDHGVQ
TMIEGPGHVPMQLIRENMTRQLDVCQEAPFYTLGPLTTDIAPGYDHITSAIGAAQIAWYG
TAMLCYVTPKEHLGLPDRQDVRDGVIAYRIAAHAADLAKGHPGAQARDNALSKARFEFRW
EDQFNLSLDPLKARALHDETLPADAAKTAHFCSMCGPHFCSMKLSHDLRAPDVLAGLEEK
AREFRALGGEVYVPRQEHGPEGEA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctgaccccacccccgaccgaccccatgaccgaagccctgacgatcctcgac
ccggagttgaccgcgccgttcccgaacagcgagaaggtgtacctgaccggcacgctgcat
gcgggcgtgcgggtgcctgcgcggcgcatccggcagtcgccgacgctggaacgcgtgggg
gacctgacccgcaccgtgccgaacccggccctgctcgtgccggacacgagcgggccgtac
acggacgcccgcctgagcgtggacctgcgcgccgggctggggcacgcgcggccctggctg
gccggggacgcccggctggacctggcgcgggagcgtcaccacccggcgctggacgtcagt
ggaccgctgccgttcccgcgcgtgccccggccccgccgcgcccgccccggcgcggggatc
acacagctgcaggcggcgcgccgtggcgagatcaccccggagatggaattcgtcgccctg
cgcgaggcgctgcggcaggacccggacttcgacctgacgcaccagcaccccggtcaggcc
ttcggggccgccatcccgcgcgagatcacgccggaattcgtccggtcggaggtcgcgcgg
ggccgcgcggtgatccccgcgaacatcaaccacccggaactcgaacccaccgtgatcggg
cggaatttccgcgtgaagatcaacgcgaacctcggcaccagcatcgtgaccagctccatc
gaggaggaggtcggaaagatgatctgggcgacccgctggggggcggacacggtcatggac
ctctccacgggtcgacacatccaccccacccgcgagtggatcgtgcggaacagcgccgtc
ccggtgggcaccgtgccgatctatcaggcgctggagaaggtgggtggcgtcgccgaggac
ctgacctgggacgtgtaccgcgacacgctgatcgagcaggccgagcagggcgtggactac
atgaccgtccacgcgggcgcgcggctggcgcacctgccgctcaccgcgcggcggcgcacc
gggatcgtgtcgcgcggcgggagcatcctcgccaagtggtgcctcgcgcaccacagggag
aacttcctgcatacgcacttcgcggacatctgcgagatcctcgccgcgtacgacatcacc
ttcagtctcggggacggcctgcggcccggcagcgtcgaggacgcgaacgacgccgcgcag
ttcgcggaactcgacacgctgggcgaactcacgcgcgtcgcgtgggaccacggcgtgcag
accatgatcgagggccccggccacgtccccatgcagctcatccgcgagaacatgacccgg
cagctcgacgtgtgccaggaggcgccgttctacacgctggggccactcacgaccgacatc
gcgcccgggtacgaccacatcacgtccgcgatcggcgcggcgcagatcgcgtggtacggc
accgccatgctctgctacgtcacgcccaaggagcacctgggcctcccggaccggcaggac
gtgcgtgacggcgtgatcgcgtaccgcatcgccgcgcacgccgcggacctcgccaagggc
caccccggcgcgcaggcccgcgacaacgccctgagtaaggcgcggttcgagttccgctgg
gaggaccagttcaacctgtccctggaccccctgaaggcccgcgcgctgcacgacgagacg
ctgcccgccgacgcggcgaagaccgcgcacttctgctccatgtgcggcccgcacttctgc
tccatgaaactcagccacgacctgcgcgcccccgacgtcctggccggactggaggagaaa
gcccgcgaattccgcgcgctgggcggcgaggtgtacgtgccccgccaggaacacgggccg
gagggagaggcgtga
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