Deinococcus grandis: DEGR_03190
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Entry
DEGR_03190 CDS
T06640
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dga
Deinococcus grandis
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dga03009
]
DEGR_03190 (rimO)
Enzymes [BR:
dga01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DEGR_03190 (rimO)
Ribosome biogenesis [BR:
dga03009
]
Prokaryotic type
ribosomal protein modification factors
DEGR_03190 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BBN93586
LinkDB
All DBs
Position
333349..334839
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AA seq
496 aa
AA seq
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MTEAVKPANAGARKVGFISLGCPKALVDSERILTQLRVEGYEVAPSYEDADAVIVNTCGF
ITPAVEESLNAIGEALDATGKVIVTGCLGERPEKIMERHPKVAAITGSEAVDDVMGHVRT
LLPIETDAFTGLLPVAAPGMRAGAEQPAREDTRHGDVFAPSVKLTPRHYAYVKIAEGCNH
TCSFCIIPKLRGLQVSRDAGAVLYEAFRLIAGGTKELMIISQDTSAYGVDVRYRESEFQG
EQVRAHLTDLAVKLGEMGAWVRMHYVYPYPHVEKIVELMAAGKILPYLDVPLQHASPKVL
RAMRRPGAGKQLDTIRRWREICPELVIRSTFIVGFPGETEADFQELLTFLEDARLDRVGA
FAYSDVEEADANALPGAVPQEVKEERLARFMEVAQRISAEKLAEKVGTVMDVIIDEFNDD
EDDQPGTKLIGRTKGDAPGIDGQVYVYAAEFAGAVKIGDIVRVRIEDSDEYDLYGEVVET
PTWRPNVPQLGHFGKH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagcagtgaagcccgccaacgcgggcgcgaggaaggtggggttcatcagcctg
gggtgcccgaaggcgctggtggacagcgagcggatcctgacgcaattgcgtgtggagggg
tacgaggtcgcgcccagttacgaggacgccgacgcggtgatcgtgaatacctgtgggttc
atcacgcccgccgtggaggagtccctgaacgcgatcggcgaggcgctggacgcgaccggg
aaggtcatcgtgaccggctgcctgggtgaacgcccggagaagatcatggaacgccacccg
aaggtcgcggccatcaccggcagcgaggcggtggacgacgtgatgggccacgtgcgcacg
ctgctgcccatcgagacggacgccttcacgggcctgctgccggtcgccgcgcccggcatg
cgcgccggggccgagcagcccgcccgtgaggacacccggcacggggacgtgttcgcgccc
agcgtgaagctcacgccgcgccactacgcgtacgtgaagatcgccgagggctgtaaccac
acctgctcgttctgcatcatcccgaaactgcgcggcctgcaggtgtcgcgggacgcgggc
gcggtgctgtacgaggcgttccggctgattgcgggcggcacgaaggaactcatgatcatc
agccaggacaccagcgcttacggcgtggacgtccgctaccgcgagtccgaattccagggc
gagcaggtccgcgcgcacctgaccgacctcgccgtgaaactcggcgagatgggtgcgtgg
gtgcgcatgcactacgtgtacccgtacccgcacgtcgagaagatcgtggaactcatggct
gcgggcaagatcctcccgtacctggacgtgccgctgcagcacgccagcccgaaggtgctg
cgcgccatgcgccgccccggcgcgggcaagcagctcgacaccatccgccgctggcgcgag
atctgcccggaactcgtgatccgctcgacgttcatcgtgggcttccccggcgagaccgaa
gcggacttccaggagctgctgacgttcctggaggacgcccgcctggaccgcgtgggggcc
ttcgcgtacagcgacgtcgaggaagcggacgcgaacgcgctgcccggcgcggtgccgcag
gaggtcaaggaggagcgcctcgcgcgcttcatggaggtcgcccagcgcatcagcgccgag
aagctcgccgagaaggtcgggaccgtcatggacgtcatcatcgacgagttcaacgatgac
gaggacgaccagcccggcacgaaactcatcggccgcacgaagggcgacgcgcccggcatc
gacgggcaggtgtacgtgtacgccgccgagttcgccggagccgtgaagatcggggacatc
gtccgcgtgcgcatcgaggacagcgacgagtacgacctgtacggcgaggtcgtcgagacg
cccacgtggcgccccaacgtgccgcaactgggccacttcggcaagcactga
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