Deinococcus grandis: DEGR_04460
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Entry
DEGR_04460 CDS
T06640
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dga
Deinococcus grandis
Pathway
dga03030
DNA replication
dga03430
Mismatch repair
dga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEGR_04460
03430 Mismatch repair
DEGR_04460
03440 Homologous recombination
DEGR_04460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dga03032
]
DEGR_04460
03400 DNA repair and recombination proteins [BR:
dga03400
]
DEGR_04460
Enzymes [BR:
dga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DEGR_04460
DNA replication proteins [BR:
dga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DEGR_04460
DNA repair and recombination proteins [BR:
dga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DEGR_04460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_14
Mg_chelatase
AAA_16
DNA_pol3_gamma3
nSTAND3
GntR
Motif
Other DBs
NCBI-ProteinID:
BBN93713
LinkDB
All DBs
Position
480095..482125
Genome browser
AA seq
676 aa
AA seq
DB search
MSAIYQRARPVRWEDVVGQEHVKDVLKAALEQGRVGHAYLFSGPRGVGKTTTARLIAMTA
NCTGPTPKPCGECESCLSVRAGSHPDVMEIDAASNNSVDDVRDLREKVGLAAMRGGKKIY
ILDEAHMMSRAAFNALLKTLEEPPGHVIFILATTEPEKIIPTILSRCQHYRFRRLTPEEI
AGKLAGLAQREGVRAEGDALQLIGRLADGAMRDGESLLERMLAAGTAVTRAGVEEALGLP
PGERVRGIAAALVSGDAGAALSGAGHLYRDGFAARTVVEGLVAALGAALHAELGLNPDGR
LDGADIPRLLKLQAALDEQESRFARAADQQSLELALTHALLAADTVTGGSAPASAGAGAA
MPADLAQRLNRLEKELATLRANPPAAPSGPVGEARRAPAPAPGGAGPARALPAPTPPSPS
PPRRGQLGGRDPAGQHAAARVPETRPAARRTRLRQPRVRRPQRLPRQTGRREIRRHRQDR
SERVRPGHLRTDRAGRQPPREPRRGAIRWGTGRQRASPTPDPTPPAPAPARAAPPMREPA
PDHGAAPDVAPFDPTRSAPAAPRARAARTSRPSTRRRPRPARRNPPRSSPCRRHSRRPPR
RPSPRRPRPPRPHAPASPRPPTPPRTARAPASPDDAAPAPLADLDPGRWDDTPAAQPAST
PVTPGRPAQRTEPLPG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgccatctaccagcgggcccgcccggtccggtgggaggacgtggtcgggcaggag
cacgtcaaggacgtcctcaaggccgcgctggagcagggccgcgtcgggcacgcgtacctg
ttcagcgggccgcgcggggtggggaagaccaccaccgcccgattgatcgccatgaccgcc
aactgcaccggcccgacgccgaaaccctgcggcgagtgcgagtcgtgcctgagcgtccgc
gccggatcgcacccggacgtcatggagatcgacgcggccagcaacaacagcgtcgacgac
gtccgcgacctgcgcgagaaggtcggcctggccgccatgcgcggcgggaagaagatctac
atcctggacgaggcgcacatgatgagccgcgccgcgttcaacgcgctcctcaagacgctg
gaggaaccacccggtcacgtcatcttcatcctggcgaccaccgaaccggagaagatcatc
cccacgatcctctcgcgctgccagcattaccgcttccgccgcctgaccccggaggagatc
gccgggaagctcgccggactcgcccagcgcgagggcgtgcgcgccgagggcgacgcgctg
caactcattgggcgactggccgacggcgccatgcgcgacggcgagagcctgctggaacgc
atgctggccgctggcacggccgtgacccgcgcgggtgtggaggaggcgctgggtctcccg
cccggcgagcgcgtgcgcggcatcgccgccgccctggtgagcggggacgcgggcgcggcc
ctgagtggtgcggggcacctgtaccgcgacggcttcgcggcccgcacggtcgtcgagggc
cttgtcgcggcgctgggcgcggccctgcacgccgaactgggcctgaaccccgacggtcgc
ctggacggcgcggacattccccgcctgctgaaactccaggcggccctcgacgaacaggaa
tcccgcttcgcccgcgcggccgaccagcagagcctcgaactggccctcacgcacgccctg
ctggccgccgataccgtgaccggcggcagcgccccggccagcgcgggcgcgggggccgct
atgcctgccgacctcgcgcagcgcctgaaccgcctggagaaggaactcgccacgctgcgc
gccaacccgcccgccgcgccgtccggcccggtgggagaggcccgccgcgcgcccgccccc
gcgcccggcggtgcaggcccggcccgcgcgctgccagccccgaccccgcccagcccgtcc
ccgccccgacgggggcagctgggcggacgtgacccggcaggccagcatgcagctgcgcgc
gttcctgaaacccgcccggcagcacgccgaacccggctacgtcagcctcgggtacgacga
ccgcaacgccttccacgccaaacaggtcgccgcgaaattcgacgacatcgccaagatcgt
tctgagcgtgttcggcccggtcaccttcgaactgatcgcgccggaaggcagccgccgcgt
gaacctcggcggggggcaatccggtgggggacaggcaggcagcgcgccagccccacgccc
gaccccaccccacccgccccagccccggcccgcgccgcgcctcccatgcgcgagcctgcg
ccggaccatggagccgcgccggacgtcgcgccgttcgacccgacccgcagcgcccccgcc
gccccgcgggcacgcgcagcccggacttcgcgcccatcgacccgccgcaggcccaggcca
gccaggcgcaacccacccaggtccagcccatgcaggcgccacagccgcaggccaccccgc
cgacccagcccgcgcagacccaggccgccccgcccccacgcgccagcgtcgccacgcccc
cccacccctccccgaacggcgcgtgcccccgccagcccggacgacgccgcgcccgccccg
ctggccgacctcgaccccggacgctgggacgacacgcccgccgcgcagcccgccagcacc
cccgtgacgccgggccgccccgcgcagcgaacggaacctctacctgggtga
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