Deinococcus grandis: DEGR_09340
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Entry
DEGR_09340 CDS
T06640
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dga
Deinococcus grandis
Pathway
dga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DEGR_09340 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dga03400
]
DEGR_09340 (recD2)
Enzymes [BR:
dga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DEGR_09340 (recD2)
DNA repair and recombination proteins [BR:
dga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DEGR_09340 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
AAA_11
HHH_5
AAA_16
AAA_25
TraI_hel_assoc_N
nSTAND3
AAA_28
AAA_22
AAA
Helicase_RecD
MeaB
NTPase_1
PhoH
NPHP3_N
KTI12
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BBN94201
LinkDB
All DBs
Position
988362..990497
Genome browser
AA seq
711 aa
AA seq
DB search
MSAAVPTEAFRVTGGVNKVRFRADSGFTVMTARIRNAEGEDPDATVIGVMPPLEAGDTFS
ADVLMEEHREYGYQYRVLNLVLEAQPADLSEAGIAAYLEARVGGVGKVLAGRIAGTFGAA
TFDILESDPDRLLQVPGVTASTLHKMTSSWSQQGLERRLLAGLQGLGLSITQAQRAVKHF
GEAALERLTADLFTLTEVEGIGFLTADKLWQAQGGALDDPRRLTAAAVYALQQAAQQGGH
SYLPRARAEKGVVHYTRVTPAQARLAVETAVELGRLSDDTPPLLDTEDALHDPSRIYLPP
TLRAEKKLASLIRTLIATPPAGDEWIVPKGAAKGLSAEQAGVLDLLGEHRLVVLTGGPGT
GKSTTTRAVADLAEQLGLEVGLCAPTGKAARRLGEVTGRAASTIHRLLGYGPAGFRHNHL
EPAPYDLLIVDEVSMCGDGLMLSLLAAVAPGARVLLVGDTDQLPPVDAGLPLHALTQTAP
TVRLTQVYRQAAENPIIRAAHGLLHGQAPAWGDPRLNLTETEPDVGARRVALLVRDMGGP
TQVQVLTPMRKGPLGVEMLNHHLQSLFNPGEGGVRIGDSHARPGDIVVQTKNDYTNEVFN
GTVGTVLKADGSRLTVDFDGNIVELAGAELFNLQLGYALTVHRAQGSEWRTVLGVLHEAH
MPMLSRNLVYTALTRARDRFYAVGSATAWQRAAGRQREERCTALLERIRGR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgccgttccaaccgaggcgttccgcgtgaccggcggcgtgaataaagtgcgg
ttccgcgccgattcgggcttcacggtcatgaccgcccgcatccgcaacgccgagggtgag
gaccccgacgcgaccgtgatcggcgtgatgccgcccctggaggccggggacaccttcagc
gccgacgtgctcatggaggagcaccgcgagtacgggtatcagtaccgcgtgctgaacctc
gtgctggaggcccagcccgccgacctgtccgaggcgggcatcgccgcgtacctcgaagcg
cgggtgggcggcgtgggcaaggtcctggccgggcgcatcgcggggacgttcggcgcggcg
accttcgacatcctggagagcgacccggaccggctgctgcaggtgccgggcgtgacggcc
agcacgctgcacaagatgacgtccagctggtcgcagcagggcctggaacgccgcctgctg
gccgggttgcagggcctgggcctgagcatcacgcaggcgcagcgggccgtgaagcacttc
ggcgaggccgcgctggaacgcctgaccgccgacctgttcaccctgaccgaggtcgagggc
atcggcttcctgaccgcggacaagctgtggcaggcgcagggcggcgcgctggacgacccg
cgccgactgaccgccgccgccgtgtacgcgctgcagcaggcggcgcagcagggcgggcac
tcctacctgccgcgcgcccgcgcggagaagggcgtggtgcactacacccgcgtgacgccc
gcccaggcccggctggcagtcgagacggcggtggaactgggtcgcctgagtgacgacacg
cccccgctgctggacaccgaggacgcgctgcacgaccccagccgcatctacctgccgcct
accctgcgcgccgagaagaaactcgccagcctgatccgcacgctgatcgccacgcccccc
gccggggacgagtggatcgtcccgaagggcgcggcgaagggcctgtccgccgagcaggcc
ggcgtgctggacctgcttggggagcaccggctggtcgtcctgaccggcgggcccggcacc
ggcaagagcaccaccacccgcgccgtcgcggacctcgccgagcagctggggctggaggtc
ggcctgtgcgccccgaccggcaaggctgcgcgccgcctgggcgaggtgacgggccgcgcg
gcgagcaccattcaccgcctgctgggctacggcccggcgggtttccggcacaaccacctc
gaacccgccccgtacgacctgctgatcgtggacgaggtcagcatgtgcggcgacggcctg
atgctgtcgctgctcgcggcggtcgcgccgggcgcgcgggtgctgctggtcggcgacacg
gaccagctgccgccggtggacgccgggctgcccctgcacgccctgacgcagacggcgccc
accgtgcgcctgacgcaggtgtaccggcaggcggccgagaaccccatcatccgcgccgcg
cacgggctgctgcacgggcaggcccccgcgtggggcgacccccgattgaacctcacggag
accgagcccgacgtcggcgcccggcgcgtggcgctgctcgtgcgggacatgggcggcccc
acgcaggtgcaggtcctgacccccatgcgcaagggcccgctgggcgtggagatgctcaac
caccacctccagagcctcttcaaccccggcgagggcggcgtgcgcatcggggactcgcac
gcgcggcccggcgacatcgtcgtgcagacgaagaacgactacaccaacgaggtcttcaac
ggtacggtcggcaccgtcctgaaggccgacggatcgcgcctgaccgtggatttcgacggg
aacatcgtggagctggccggggcggaactgttcaacctgcagctcgggtacgcgctgacc
gtgcaccgcgcgcagggcagcgagtggcgcaccgtgctgggcgtcctccacgaggcgcac
atgccgatgctgagccgcaacctcgtgtacaccgccctgacccgcgcccgcgaccgcttc
tacgccgtgggctccgccaccgcgtggcagcgcgccgccgggcgccagcgcgaggaacgc
tgcacggcgctgctcgaacgcatccggggccgctga
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