Deinococcus grandis: DEGR_12650
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Entry
DEGR_12650 CDS
T06640
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dga
Deinococcus grandis
Pathway
dga03030
DNA replication
dga03410
Base excision repair
dga03420
Nucleotide excision repair
dga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEGR_12650 (polA)
03410 Base excision repair
DEGR_12650 (polA)
03420 Nucleotide excision repair
DEGR_12650 (polA)
03440 Homologous recombination
DEGR_12650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dga03032
]
DEGR_12650 (polA)
03400 DNA repair and recombination proteins [BR:
dga03400
]
DEGR_12650 (polA)
Enzymes [BR:
dga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DEGR_12650 (polA)
DNA replication proteins [BR:
dga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DEGR_12650 (polA)
DNA repair and recombination proteins [BR:
dga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DEGR_12650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DEGR_12650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
BBN94532
LinkDB
All DBs
Position
1323559..1326339
Genome browser
AA seq
926 aa
AA seq
DB search
MTSAAPDTLVLIDGHALAFRSYFALPPLTNKQGETTNAILGFLRLTLRLARQRSNQVIVV
FDPPVKTFRHEQFDGYKSGRAETPADLPGQINRIREIVDAIGFPRLEEPGYEADDVIASL
TRKAEGTGMQVRIVTSDRDAYQLLDDHVRVITNDFRLIGPAEVLEKYGVTVGQWVDYRAL
TGDASDNIPGAKGIGPKTAAKLLQEYGTLEGIYAAAKAGTLKPDGTRQKLLDSEEAVEFS
HRLSCMVTDLPLDVQLGAGRLPGNPERLHELLTELDLHSIKRDVAALDGIESVLSVPDAV
NDSTHRDAPHDAPDAAVVPATPALTIQTAEWRTPAQGVIWGYRLSREDDLTAALVDAATL
ELDGTTGTVRTAPTTEPAEWRKAEVYAQPGGLFDHPDEPAAPLTKTQQKAAEKARKEQEK
AAAKLREQYPATVDDAQFVAQRTVTAAAAKALATHLSVRGTSVEPGDDPLLMAYLLDPAN
TTMSAVTQRYLNVPWPDDAAGRAAITAQLLDLLPPLLDDTRRTLYDDMEQPLSAVLARME
VRGVRLDSEYLRGLSAATGARLSTLETQIHSLAGREFQIRSRDQLEAVLYDELGLASGKK
TKLTGKRSTAVAALEPLRDEHPIIPALLEYRELEKLRGTYLDPLPNLVNPRTGRLHTTLA
QAAVATGRLSSLNPNLQNIPIRSETGREIRKGFIADPGHCLISADYSQIELRLLAHIADD
PLMQQAFQEGADIHRRTAAQVLGLNEGTITPDQRRAAKTVNFGVLYGMSAHRLSGDLGIP
YADAAGFIETYFATYPGIRAYIDRTLEFGRQHGYVETLYGRRRYVPELVATNRTLREAGE
RLAYNMPIQGTAADIIKLAMITLERELQGTGARLLLQVHDELLLEAPEDKAEEISDTVRR
IMEGAASLTVPLAVEVGVGPNWYDTK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgccgcccccgacaccctggtgctgatcgacggccacgccctggcgttccgc
tcgtatttcgcgctgcctcccctcacgaacaagcagggcgagaccaccaacgccatcctg
ggctttctgcgcctcacgctgcgcctcgcccggcagcgcagcaatcaggtcatcgtggtg
ttcgacccacccgtgaagaccttccggcacgagcagttcgacgggtacaagtccggccgc
gccgagacgcccgccgacctgcccggccagatcaaccgcatccgcgagatcgtggacgcc
atcggcttcccccgcctggaagaacccggctacgaggccgacgacgtgatcgccagcctg
acccgcaaggccgaggggaccggcatgcaggtccggatcgtcaccagcgaccgcgacgcg
taccagctgctcgacgaccacgtgcgtgtcatcacgaacgacttccgtctgatcggcccg
gccgaggtgctcgaaaagtacggcgtgacggtggggcagtgggtggactaccgcgcgctg
accggcgacgccagcgacaacatccccggcgcgaagggcatcggcccgaaaaccgccgcc
aagctgcttcaggagtacggcacgctggagggcatctacgccgccgcgaaggccggcaca
ctgaaacccgatgggacgcgccagaaactcctcgattccgaggaagccgtggagttcagc
caccggctgtcctgcatggtcacggacctcccgctggacgtgcagctcggcgcgggccgc
ctgccgggcaacccggagaggctgcatgagctgctgaccgagcttgacctgcactccatc
aagcgggacgtggcggccctggacggcatcgagagtgtcctgagcgtccccgacgcggtg
aacgacagtacccaccgcgacgcgccccacgacgccccagacgctgccgtcgtgcccgcc
accccggccctcaccatccagaccgccgagtggcgcacccccgcgcagggcgtcatctgg
ggctaccgcctgtcccgcgaggacgatctgaccgccgccctcgtggacgccgccaccctc
gaactcgacggcacgaccggcaccgtccgcaccgcgcccaccaccgaacctgccgagtgg
cgcaaagccgaggtgtacgcccagcccggcggcctgttcgaccaccccgacgaacccgcc
gcgcccctcaccaaaacccagcagaaggctgccgagaaggcccgcaaggagcaggagaag
gccgccgcgaaactccgcgagcagtaccccgcgacggtggacgacgcgcagttcgtcgcg
cagcgcaccgtcaccgccgccgccgccaaggccctcgccacgcacctcagcgtgcgcggc
accagcgtcgaacccggcgacgaccccctgctgatggcgtacctgctcgaccccgccaac
accaccatgagcgccgtcacccagcggtacctgaacgtcccctggcccgacgacgccgcc
ggacgcgccgcgatcaccgcgcaactcctcgacctcctgccgcccctgctggacgacacc
cgccgcacgctgtacgacgacatggaacaacccctgtccgccgtcctggcgcgcatggaa
gtgcgcggtgtgcgcctggacagcgagtacctgcgcggcctctccgccgccaccggcgcg
cgcctgagcaccctggaaacccagatccactcgctggccggacgcgaattccagatccgc
agccgcgaccagctcgaagccgtcctgtacgacgaactcggcctcgccagcggcaagaag
accaaactcaccggcaaacgcagcaccgccgtcgccgccctcgaacccctccgggacgag
caccccatcatccccgccctgctcgaataccgcgaactggaaaaactgcgcggcacgtac
ctcgaccccctcccgaacctcgtcaacccccgcaccggccgcctgcacaccaccctcgcg
caggccgccgtcgccaccggccgcctcagcagcctcaaccccaacctgcagaacatcccc
atccgcagcgagaccggccgcgagatccgcaagggcttcatcgccgaccccggccactgc
ctgatcagcgccgactactcgcagatcgaactgcgcctcctggcgcacatcgccgacgat
cccctcatgcagcaggccttccaggagggcgcggacatccaccgccgtaccgccgcgcag
gtcctcggcctgaacgagggaaccatcacccccgatcagcgccgcgccgccaagaccgtc
aacttcggcgtgctatacggcatgagcgcccaccgcctctcgggcgacctcggcatcccc
tacgcggacgccgccggattcatcgaaacgtacttcgccacgtaccccggcatccgcgcg
tacatcgaccgcaccctcgaattcggccgccagcacggctacgtcgagaccctctacggc
cgccgccgctacgtccccgaactcgtcgccaccaaccgcaccctgcgcgaagccggggaa
cgcctcgcgtacaacatgcccatccagggcaccgccgccgacatcatcaaactcgccatg
atcaccctggaacgcgaactccagggcaccggcgcccgcctcctgctacaggtgcacgac
gaactgctcctcgaagcccccgaagacaaagccgaggagatcagcgacaccgtgcgccgc
atcatggaaggtgccgccagcctcaccgtgcccctcgccgtcgaagtcggcgtcggaccg
aactggtacgacacgaaataa
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