Deinococcus grandis: DEGR_25060
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Entry
DEGR_25060 CDS
T06640
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dga
Deinococcus grandis
Pathway
dga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DEGR_25060 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dga03021
]
DEGR_25060 (rpoA)
03400 DNA repair and recombination proteins [BR:
dga03400
]
DEGR_25060 (rpoA)
Enzymes [BR:
dga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DEGR_25060 (rpoA)
Transcription machinery [BR:
dga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DEGR_25060 (rpoA)
DNA repair and recombination proteins [BR:
dga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DEGR_25060 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
IMS_HHH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BBN95773
LinkDB
All DBs
Position
complement(2562714..2563715)
Genome browser
AA seq
333 aa
AA seq
DB search
MDQKRPQLKARVDGDYGEFVLEPLTRGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHE
FSTIPGVKEDVIQIILNLKELVVKFHATGPKTLTLRAQGEGVVKASAFEVPSDAEIVNPD
LVIANLAEDGKLVMEVRIEEGEGYVPADKHATKDRINSIPVDAMFSPVRRVAYHVENTRV
GQQTDLDRLILRVWTDGSTSPQDTLDKAVEILREELTVFGNVETLPAAAPEYQQPVYTPA
PTAPNVYDLPPSTASLNLNPGDYPAEMDSPRVTLEGLGLTTRVLHSLKEEGIDSVDALCA
LSDRDLKKVPGIGERSLDEIKQQLAQFGLALRD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaaagcgccctcaactcaaagcccgcgtggacggcgactacggcgagttcgtc
ctggaaccgctcacccgcggctacggcgtcaccatcgggaaccccatccggcgcatcctg
atgtcctccatccccggtaccgccgtcaccagcgtgtacatcgaggacgtcctgcatgag
ttctccaccattcccggcgtcaaggaagacgtcatccagatcatcctgaacctcaaggaa
ctcgtggtgaaattccacgcgaccggccccaagaccctcaccctgcgcgcgcagggcgaa
ggcgtcgtcaaggccagcgccttcgaggtccccagcgacgccgagatcgtcaaccctgac
ctggtcatcgccaacctcgccgaggacggcaaactggttatggaagtgcgcatcgaggaa
ggcgaaggctacgtccccgcggacaagcacgccaccaaagaccgcatcaactcgatcccc
gtcgacgcgatgttctcccccgtgcgccgcgtggcgtaccacgtcgagaacacccgcgtg
ggccagcagactgacctggaccgcctgatcctgcgcgtctggaccgacggcagcaccagc
ccccaggacaccctggacaaggctgttgagatcctgcgtgaggaactcacggtgttcggc
aacgtggagaccctccccgccgccgcccccgagtaccagcagcccgtctacacccccgcg
cccaccgcgccgaacgtgtacgacctgccgcccagcaccgccagcctgaacctgaacccc
ggcgactaccccgccgagatggactccccccgcgtgaccctcgagggtctgggcctcacc
acccgcgtgctgcactccctgaaggaagaaggcatcgacagcgtggacgccctgtgcgcc
ctgtccgaccgcgacctgaaaaaggtccccggcatcggcgagcgcagcctcgacgagatc
aagcagcaactcgcccagttcggcctcgccctgcgcgactga
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