KEGG   Deinococcus grandis: DEGR_29320
Entry
DEGR_29320        CDS       T06640                                 
Name
(GenBank) hypothetical protein
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
dga  Deinococcus grandis
Pathway
dga03030  DNA replication
dga03430  Mismatch repair
dga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DEGR_29320
   03430 Mismatch repair
    DEGR_29320
   03440 Homologous recombination
    DEGR_29320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dga03032]
    DEGR_29320
   03400 DNA repair and recombination proteins [BR:dga03400]
    DEGR_29320
Enzymes [BR:dga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DEGR_29320
DNA replication proteins [BR:dga03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DEGR_29320
DNA repair and recombination proteins [BR:dga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DEGR_29320
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 Intein_splicing LAGLIDADG_3 tRNA_anti-codon T2SSK
Other DBs
NCBI-ProteinID: BBN96199
LinkDB
Position
complement(2963006..2968315)
AA seq 1769 aa
MTASADSAKPHIHVPDGSCCTPKKFAHLHQHTQYSLLDGAAKLKDLLKWAKEVTPEGQTP
ALAMTDHGNMHGAVHFYNYATGMGVKPIIGYEAYVVPGEGTRRDRTRAQDGEKGIFHLTL
LARDFEGYQNLCRLSSRGYTEGYYYKPRIDHELLREHHKGVIAFSGCLGSEVQQLLLQGR
EDDAKKRLLWYRELFGENYFIEIQDHGLSEQKRNNPILRAWAQELGIGMVATNDGHYVKK
SDATAHETLLAIQTKATLADENRFKFPCDEFYVKNLEEMQASLPVSEWGEEPFDNTALIA
EMCNVDLPVGKKRVYQMPALPIPEGRTMPEELRVQTYRGTVKRYPAHATEGLLRDYATRT
LAALGADAQKVLDRAGGCDPQSCDLETLYTLLAFAGSEWEARGKAAGEKYTKYPALELME
AEVDSGPLPAYAHEDCRRAAQKDSDTSIALDGEHGEETTRAHHRHALVILRRAEYELSVI
NNMGFPDYFLIVADYINWAKDQDISVGPGRGSGAGSLVAYAMRITNLDPLEFELLFERFL
NPDRISMPDFDIDFNDARRTEVIQYVQDKYGEDKVAQIATFGTMASKACLKDVARVMGLE
YAKVDKVSKLIPIKFGKSYSLEQAREAVPDIQQMLNEDAQLKEAYEFAQKLEGLTRHASV
HAAGVVIGKTQLTDLVPVMRDTSGAGMVCQYDMKAVEDIGLIKMDFLGLRTLSFLDEAKR
ILKESGTDFEARYGTFDDIPFDDARTYELLSRGDTKGVFQLEGAGIADASRRLKPRRLAD
IIALSALYRPGPMENIPTYVRRHHGLEQVDYVRDGFPNSAQYLEKILAETYGIPVYQEQI
MQIASEVAGFSLGGADLLRRAMGKKDAEEMKRQRQIFVEGAGGNGVPKDEGNKLFDLLDA
FANYGFNKCLTGDTRVPVAGGELRRIEELYRDGQPVQLPSVNSAYRLELRSTGQFFDNGV
KPVFRVRTALGRELTATGNHPLLTLDGWQNVEDLTAGDRIAAPARLPELGSEAWPDHQAA
LLGWMLAEGNTCHPHGAYLYSQSEIQVADMVTQARQFPNTRPTVTVRPERRNVHDVYLGS
GVRGSGTDGAGGKSGVRQWLEALGLVGVKADAKAIPAAAFRLNNASLAVLIGRYWSGDGF
LFGNRNTTPYAATASRALADDLTHLLLRLGMVARVTRKHFTYRRGDDVAGRTGYTVHLVG
RRSIDQFLTVIAPHIVGRDKQLDALHAYYAATPPHRETIDTLPASVKTRVQTAKIASGLG
WREIETRSGVSTKELYGGPRAHKKGFRRATIQTLADFFDDPALSDLCSDDLYWDTITSIE
PAGHAQTYDLEVPGTHNFVANDLIVHNSHSAAYGVITYQTAWLKANYPVQFMAALLTVER
KDSDKVAEYVSDARKMDVHVLPPDINKSAPDFAVVGQDILFGLYAIKGLGEGAVLKILEE
RERAGTFKSLADFCSRLGNKVCNRKAMESLIKSGAFDQFGDRRQLLESLEESMTWAQGAA
ALANSGMDALFGAQEVAPEPRLRAGVIPYTDLERLSIEKEALGLYISGHPLEQHEGLREA
ASCRISDLDTWFQTQNVAPGKRIKAVLAGMIESVVKKPTKSGGMMARFILADESGQTELV
AFSRAYDRIQDKLVNDTPALVIVELESEDGGLRAIAEEVVSTEQLGEVPKVMYVTIDLEN
ATPDALGEFQSLLDEHAGSMPTYLRLETPEQFVLYQLDHGMGSPDAIRVLNHTFPWADAY
LAYDQQTILGRFAPKPPAWMNKQNGGMRA
NT seq 5310 nt   +upstreamnt  +downstreamnt
atgaccgcgtctgccgattccgcgaagcctcacattcacgttccggacggctcctgctgc
accccgaagaagttcgcgcacctgcatcagcacacgcagtactcgctgctggacggcgcg
gcgaaactcaaggacctgctgaagtgggccaaggaggtcacgccggaagggcagaccccg
gcgctggccatgacggaccacggaaacatgcacggcgcggtgcacttctacaactacgcg
accgggatgggcgtcaagccgatcatcgggtacgaggcgtacgtcgtgccgggcgagggc
acccgccgcgaccggacgcgcgcgcaggacggcgagaaaggcatcttccacctgacgctg
ctcgcccgtgacttcgaggggtaccagaacctctgccgcctgagttcacgcgggtacacg
gaaggctactactacaagccgcgcatcgatcacgaactgctgcgcgagcaccacaagggc
gtcattgcgttcagcgggtgcctgggcagcgaggtgcagcaactcctcctgcagggccgc
gaggacgacgccaagaaacgcctgctgtggtaccgcgagctgttcggcgagaactacttc
atcgagatccaggaccacggtctgagcgagcagaagcgcaacaatcccatcctgcgggcc
tgggcgcaggaactcgggatcgggatggtcgccacgaacgacgggcactacgtcaagaag
agcgacgccaccgcgcacgagacgctgctggccatccagacgaaggcgaccctggcggac
gagaaccgcttcaagttcccctgcgacgagttctacgtgaagaaccttgaggagatgcag
gcgtccctgccggtcagcgagtggggcgaggaacccttcgacaacaccgccctgatcgcc
gagatgtgcaacgtggacctcccggtcggcaagaagcgcgtgtaccagatgcccgccctg
cccatccccgagggccgcaccatgcccgaggaactgcgcgtgcagacgtaccgcgggacc
gtgaaacgctacccggcgcacgcgacggaagggctgctgcgcgactacgcgacccgcacc
ctggccgcgctgggcgccgacgcgcagaaggtgctggaccgcgcgggggggtgcgacccg
cagagctgcgacctggagacgctgtacaccctgctggccttcgcgggcagcgagtgggaa
gcgcgcggcaaggcggcgggcgagaagtacaccaagtaccccgcgctggaactcatggag
gccgaggtggactccgggccgctgcccgcctacgcgcacgaggactgccgccgcgccgcg
cagaaggacagcgacaccagcatcgccctggacggcgagcacggcgaggaaaccacccgc
gcccaccaccgccacgcgctggtgatcctgcgccgcgccgagtacgaactgagcgtcatc
aacaacatgggtttccccgactacttcctgatcgtcgcggactacatcaactgggccaag
gatcaggacatcagcgtcggaccgggccgtggctcgggcgcaggctcgctcgtggcgtac
gcgatgcgcatcacgaacctcgaccccctggaattcgagctgctgttcgaacgattcctg
aacccggaccgcatctccatgccggacttcgacatcgacttcaacgacgcccggcgcacc
gaagtcatccagtacgtgcaggacaagtacggcgaggacaaggtcgcgcagatcgccacc
ttcggaaccatggcgtccaaggcgtgcctgaaggacgtggcgcgcgtcatgggcctcgag
tacgccaaggtcgacaaggtgtcaaaactcattccgatcaagttcggcaagagctacagc
ctcgaacaggcgcgcgaggccgtgccggacatccagcagatgctgaacgaggacgcccag
ctgaaagaggcgtacgagttcgcgcagaaactcgaagggctgacccgccacgccagcgtc
cacgccgccggggtcgtcatcggcaagacgcaactgaccgacctcgtgcccgtcatgcgc
gacacctcaggcgcgggcatggtctgccagtacgacatgaaggccgtcgaggacatcggc
ctgatcaagatggacttcctgggcctgcgcaccctgtccttcctcgatgaagccaaacgc
atcctcaaggaatccggcaccgacttcgaggcccggtacggcaccttcgacgacattccc
ttcgacgacgcccgcacctacgaactcctcagccgcggggacaccaagggcgtcttccag
ctcgaaggggccgggatcgccgacgccagccgccgcctcaaaccgcgccgcctcgcggac
atcatcgccctttcggcgctgtaccgccccggcccgatggagaacatccccacctacgtc
cgccgccaccacggcctcgaacaggtggactacgtccgcgacggcttcccgaacagcgcc
cagtacctcgaaaagatcctcgccgaaacctacggcatccccgtgtaccaggagcagatc
atgcagatcgcctccgaagtcgccggattcagcttaggcggcgccgacctgctgcgccgc
gcgatgggtaagaaggacgccgaggagatgaaacgccagcggcagatcttcgtcgagggc
gcaggcggcaacggcgtccccaaggacgagggcaacaagctgttcgacctgctcgacgcg
ttcgcgaactacggcttcaacaagtgtctgacgggcgacacgcgcgtgcccgtcgcgggc
ggcgaactgcggcgcatcgaggagctgtaccgcgacggccagcccgtgcagctgcccagc
gtgaacagcgcgtaccgcctggaactgcgctccaccgggcagttcttcgacaacggcgtg
aaacccgtcttccgcgtccgcaccgcgctgggccgcgaactgaccgccaccgggaaccac
ccgctgttgacgctggacggctggcagaacgtggaagacctgacagccggcgaccggatc
gccgcgcccgcccgcctccccgaactgggcagcgaggcgtggcccgaccatcaggcggca
ctgctcggctggatgctcgccgagggcaacacctgccacccacacggcgcgtacctgtac
tcccagagcgagattcaggtggccgacatggtcacccaggcccggcagttcccgaacacc
cgccccactgtgaccgtccgcccagagcggcgcaacgtgcacgacgtgtacctgggcagc
ggcgtgcgcggcagcgggacagacggggcgggcgggaagtccggcgtgcgccagtggctt
gaagcgctgggtctcgtgggagtgaaagccgacgccaaggccatccccgccgccgcgttc
cggctaaacaacgcctcgctggccgtcctcatcggccgctactggtccggcgacggcttc
ctgttcggcaaccgcaacaccaccccgtacgccgctaccgcctcccgcgcgctggccgat
gacctcacccacctgctgctgcgcctgggcatggtcgccagggtcacccgcaaacacttc
acctaccggcgcggcgacgacgtggccggacgcaccgggtacaccgttcatctggtcggg
cggcgctccatcgaccagttcctgaccgtcatcgcgccacacatcgtgggccgcgacaag
caactggacgccctgcacgcctactacgccgctaccccaccccaccgcgagaccatcgac
accctgcccgccagcgtcaagacccgcgtgcagaccgccaagatcgccagcggcctcggc
tggcgcgagatcgaaacccgcagcggcgtcagcaccaaagaactctacgggggacccagg
gcgcacaagaaaggcttccgccgcgccaccatccagaccctcgcggacttcttcgacgac
ccggccctgagcgacctgtgctccgacgacctgtactgggacaccatcaccagcatcgaa
cccgccgggcacgcgcagacctacgatctggaagtccccggcacgcacaacttcgtcgcc
aacgacctgatcgtccacaacagccacagcgccgcgtacggcgtcatcacgtaccagacc
gcgtggctcaaggcgaactaccccgtgcagttcatggccgccctgctgaccgtcgaacgc
aaggacagcgacaaggtcgccgagtacgtcagcgacgcccgcaagatggacgtccacgtc
ctcccccccgacatcaacaagtccgcacccgacttcgcggtcgtcgggcaggacatcctc
ttcggcctgtacgccatcaagggcctcggcgagggcgccgtgctgaagatcctcgaggaa
cgcgaacgcgccgggaccttcaagagcctcgcggacttctgctcccgcctgggcaacaag
gtctgcaaccgcaaagccatggaaagcctcatcaagagcggcgcgttcgaccagttcggc
gaccgccgccagctcctcgagagcctcgaggaatccatgacctgggcgcagggcgccgcc
gcgctcgccaacagcggcatggacgccctgttcggcgcgcaggaagtcgcccccgaaccc
agactcagggcgggcgtcatcccctacaccgacctggaacgcctcagcatcgagaaggaa
gccctgggcctctacatcagcggccacccgctcgaacagcacgaaggtctgcgcgaagcc
gccagctgccgcatctccgacctcgacacgtggttccagacgcagaacgtcgcccccggc
aaacgcatcaaggccgtcctcgcgggcatgatcgaaagcgtcgtcaagaaacccaccaaa
tccggcggcatgatggcccgcttcatcctcgccgacgaaagcggccagaccgaactcgtc
gcgttcagccgcgcctacgaccgcatccaggacaaactcgtcaacgacacccccgccctc
gtcatcgtcgaactcgaaagcgaagacggcggcctgcgcgccatcgccgaggaagtcgtc
agcaccgaacaactcggcgaagtccccaaagtcatgtacgtcaccatcgacctcgaaaac
gccaccccagacgccctcggcgaattccagagcctcctcgacgaacacgccggcagcatg
cccacctacctccgcctcgagacacccgaacagttcgtcctgtaccaactcgaccacggc
atgggcagcccagacgccatccgcgtcctcaaccacaccttcccctgggccgacgcgtac
ctcgcctacgaccagcagaccatcctcggccgcttcgcccccaaaccccccgcctggatg
aacaaacaaaatgggggcatgcgggcgtga

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