Deinococcus grandis: DEGR_30540
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Entry
DEGR_30540 CDS
T06640
Name
(GenBank) hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dga
Deinococcus grandis
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dga03009
]
DEGR_30540
Enzymes [BR:
dga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DEGR_30540
Ribosome biogenesis [BR:
dga03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DEGR_30540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_12
Methyltransf_31
Methyltransf_11
TRAM
Ubie_methyltran
Methyltransf_15
NodS
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
BBN96321
LinkDB
All DBs
Position
3103851..3105083
Genome browser
AA seq
410 aa
AA seq
DB search
MSDALLTLEIEKLVAGGLGLARDESGVVLVRGALPGEQVTARVRSGKGVRQGVTVEVLRR
SPDRVDGPDLPTADLAHASYEAQLGFKRAFVEEALSRIAKVRHGVAATVPSPQEWGYRNT
AQYLVTPQGLAYRERRGSDPLVVRADPLVMPQIQAVLDRIDPERLDPATEVAFRASRLTG
EVVAAVIGAGEPKAFLRASDHLMEAGVVGVSLAQPAGRRFSAGVRLIAGEGEITEQFGEV
QVRVSATGFAQVNPEAAGLAYRRATQLAGEGEHAVDLYGGAGAIGRHLAKHFRRVTVLDS
SAEALARGRQDVANTGEGNVTFRNGDAARFSELGTDVIVVDPPRAGLEEAARDHIHASTA
DRLVYVSCDPATWARDVGDLVRRGWKLGEVVPHDFYPQTSHVEIVSVLNR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgcactgcttacgctggaaatcgagaaacttgtagccggggggctggggctg
gcccgggacgagtccggcgtggtgctggtccggggggcgctgccgggtgagcaggtcacg
gcgcgggtgcgcagcgggaagggcgtgcgtcagggcgtgacggtggaggtgctgcgccgc
agcccggaccgcgtggacggcccggacctgcccacggcggatctggcgcacgcgagttac
gaggcgcagctgggcttcaagcgggcgttcgtggaggaggccctgagccgcatcgcgaag
gtgcggcacggggtggcggcgacggtgcccagcccgcaggagtggggctaccggaacact
gcgcagtacctcgtgacgccgcagggtctggcgtaccgtgagcggcgcggcagtgatccg
ctggtggtgcgcgcagacccgctggtgatgccgcagattcaggcggtgctggaccgcatt
gacccggagcggctggacccggcgaccgaggtggcattccgcgccagccgcctgacgggc
gaggtcgtggcggcggtgatcggcgcgggggaaccgaaggcgttcctgcgggccagcgat
cacctgatggaggccggggtggtgggcgtgagtctggcgcagccggcgggtcggcgcttc
agtgcgggcgtgcgcctgatcgcgggtgagggcgagatcaccgagcagttcggggaggtg
caggtgcgggtgtccgcgacgggcttcgcgcaggtgaacccggaggcggcgggtctcgcg
taccgccgggcgacgcagctggccggtgagggcgagcacgcggtggacctgtacggcggg
gcgggcgcgatcggtcgtcacctcgcgaagcacttccggcgggtgacggtgctggattcg
tcggcggaggcgctggcgcgtgggcggcaggacgtggcgaacaccggcgaggggaacgtg
acgttccgcaacggggacgcggcgcgcttcagtgagctgggcacggacgtgatcgtggtg
gacccgcctcgggcggggctggaggaggcggcgcgggatcacattcacgcgagcacggcg
gaccggctggtgtacgtgtcgtgcgatccggcgacgtgggcgcgggacgtcggggatctg
gtgcggcgcggctggaagctgggcgaggtggtcccgcacgacttctacccgcagacgagt
cacgtggagatcgtgagcgtcctgaaccgctga
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