Deinococcus grandis: DEGR_31140
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Entry
DEGR_31140 CDS
T06640
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
dga
Deinococcus grandis
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dga03032
]
DEGR_31140 (hup)
03036 Chromosome and associated proteins [BR:
dga03036
]
DEGR_31140 (hup)
03400 DNA repair and recombination proteins [BR:
dga03400
]
DEGR_31140 (hup)
DNA replication proteins [BR:
dga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DEGR_31140 (hup)
Chromosome and associated proteins [BR:
dga03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DEGR_31140 (hup)
DNA repair and recombination proteins [BR:
dga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DEGR_31140 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF7566
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBN96381
LinkDB
All DBs
Position
complement(3156358..3156714)
Genome browser
AA seq
118 aa
AA seq
DB search
MAKSTKPAAKKPAPKKGAAKPAPKAEAGKIAKTQIIDMVADKTTLNKKQAGDAVATVIDC
IVDALRGGSSVGLPGLGTLSVTHTAERTGVKPGTSERITIPAGKKVRFKVATTLKGTL
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagcaccaaacccgccgcgaagaaacccgcccccaagaaaggcgcggcgaaa
cccgccccgaaagccgaggccgggaagatcgccaagacgcagatcatcgacatggtcgcc
gacaagaccaccctgaacaagaaacaggccggggacgccgtcgcgaccgtcatcgactgc
atcgtcgacgccctgcgcggcggcagcagcgtcggcctgcccggcctgggcaccctgagc
gtcacccacaccgccgagcgcaccggcgtcaaacccggcaccagcgaacgcatcaccatc
cccgccgggaagaaggtgcgcttcaaggtcgccacgaccctcaaaggcaccctctaa
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