Deinococcus grandis: DEGR_31430
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Entry
DEGR_31430 CDS
T06640
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dga
Deinococcus grandis
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dga03016
]
DEGR_31430
Enzymes [BR:
dga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DEGR_31430
Transfer RNA biogenesis [BR:
dga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DEGR_31430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
BBN96410
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All DBs
Position
3182711..3184099
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AA seq
462 aa
AA seq
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MTLPDLTPAQRTELELLARGKQDKSRTMRDLKQPETPEAAHALLLRAGLWTDARTPYADR
LGAALNPVTLDVPPFVPEQRLDLTHLDVYAIDDEGNRDPDDAVGIEALPGGLTRLWVHVA
DVAALVPADSPLDLEARARGATLYLPDRTIGMLPDALVEQAGLGLHDTSPALSISLDLDE
DGNADAVDVQLTTVRVQRLTYTQAQERLNAGAEPFVTLARLAAASRELRVQEGALSIDLP
EVRVKADETGATVTPLPKPEMRVVVQECMTLAGWGAAIYADDHAIALPFATQDPPHREVC
GDTLAAQWARRRTLARTRFQPAPGPHAGMGLDLYTQATSPMRRYLDLVVHQQLRAHLAGQ
DGLSGKEVAARVAQAQMNADATRQAERLSRRHHTLRFIAAQPEREWEAVVVDRRGPQATL
LIPDLAFDLPVSTPAAPGTTLRVALGDVNLPNLTLRARVLTT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcccgacctcacgcccgcgcagcgcaccgagctggaactgctcgcccgcggc
aaacaggacaagagccgcaccatgcgcgacctgaagcaacccgagacgcccgaggccgcg
cacgccctgctgctgcgcgccggcctgtggaccgacgcccgcacgccctacgccgaccgg
ctgggcgccgccctgaatcccgtgacgctggacgtgccgcccttcgtgcccgaacagcgg
ctggacctgactcacctggacgtgtacgccatcgacgacgagggcaaccgcgacccggac
gacgccgtgggcatcgaggcgctgcccggcggcctgacccgactgtgggtgcacgtggcg
gacgtggccgcgctggtccccgccgacagcccgctggacctggaggcccgcgcgcgcggc
gcgaccctgtacctccccgaccgcaccatcggcatgctgcccgacgcgctggtcgagcag
gcgggcctgggcctgcacgacaccagccccgcgctgagcatcagcctggacctggacgag
gacggcaacgccgacgccgtggacgtgcagctgaccaccgtgcgcgtgcagcgcctgacg
tacacgcaggcgcaggagcggctgaacgcgggcgcggagccgttcgtgacgctggcccga
ctggccgccgcgagccgcgaactgcgcgtacaggagggcgccctgagcatcgacctgccc
gaggtccgcgtgaaggccgacgagacgggcgcgaccgtcacgcccctgcccaaacccgag
atgcgggtggtggtgcaggaatgcatgacgctggccgggtggggcgccgcgatctacgcg
gacgaccacgccattgccctgccgttcgccacgcaggacccgccccaccgcgaggtgtgc
ggcgacacgctggccgcccagtgggcgcggcggcgcacgctggcccgcacccgcttccag
cccgcgccgggaccgcacgcgggcatgggcctggacctgtacacgcaggcgaccagcccc
atgcgccgctacctggacctggtggtgcaccagcagctgcgcgcccatctggccgggcag
gacggtctgagcggcaaggaggtcgcggcgcgcgtggcgcaggcgcagatgaacgcggac
gccacccggcaggccgaacgcctgagccgacgccaccacaccctgcgcttcatcgccgcg
cagcccgagcgggaatgggaggcggtcgtggtggaccgccgggggccgcaggcgacgctg
ctcatcccggacctggccttcgacctgcccgtcagcacgcccgccgcgccgggcacgacg
ctgcgcgtggcgctgggggacgtgaacctgccgaacctgacgctgcgcgcgcgggtgctg
accacctga
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