Deinococcus grandis: DEGR_33240
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Entry
DEGR_33240 CDS
T06640
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
dga
Deinococcus grandis
Pathway
dga00860
Porphyrin metabolism
dga01100
Metabolic pathways
dga01240
Biosynthesis of cofactors
Module
dga_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
DEGR_33240 (cobD)
Enzymes [BR:
dga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
DEGR_33240 (cobD)
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Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BBN96591
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Position
pDEGR-1:complement(114194..115096)
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AA seq
300 aa
AA seq
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MRGAPRRALLLALALDTLGEPPAPAHPVVWMGHLLRRARAAWRGQTPRAQLIEGGLGWAA
GVTLSAALGAACGRLPWWAQGVALKPLLARMALLRAGAEVAAALEAGNLPEARRLLSWHL
VSRDTADLTASEVAGAAIASLAENLSDSVVAPLLHARLGGLGWAAAYRFTNTADASWGYR
TPALEWPGRVAARADDLLNLAPARLSAACLLLAAGGRGWRVWRADARRTPSPNGGHPMSA
AAGALGVRLEKRGVYTLNAAGRDPDAGDLRAALTLVSRAALLAALVCLLPLPTRFRTVRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgaggggcgccccgcgccgggcgctgctcctggccctcgcgctggacacgctgggggaa
ccgccggcccccgcgcacccggtcgtgtggatggggcacctgctgcgccgcgcgcgcgcc
gcgtggcggggacagacgccgcgcgcgcagctgatcgaggggggcctgggctgggccgcc
ggggtgacgcttagtgcggccctgggtgcggcctgcgggcggctgccctggtgggcgcag
ggcgtggccctcaaaccgctgctggcccgtatggccctgctgcgcgcgggcgcggaggtc
gccgcggcgctggaggccggaaacctccccgaggcgcggcgactgctgtcctggcacctc
gtgagccgcgacaccgccgacctgacggcctccgaggtcgcgggggcggccatcgccagc
ctcgcggagaacctcagcgacagtgtcgtggcgccgctgctgcacgcgcgcctgggcggc
ctcggctgggccgccgcgtaccgcttcacgaacaccgccgacgccagctggggctaccgc
accccggcgctggagtggccgggcagggtcgcggcccgcgcggacgacctgctgaatctc
gccccggcccgcctgagcgccgcgtgcctgctgctcgccgccggtgggcgaggctggcgg
gtgtggcgcgcggacgcccggcgcacgcccagcccgaacggcgggcaccccatgagtgcc
gccgccggggcactcggcgtgcgcctggagaagcgtggcgtgtacaccctgaacgccgcc
gggcgcgaccccgacgcgggcgacctgcgcgccgccctgaccctggtcagccgcgcggcg
ctgctggcggcgctggtctgcctgctgcccctgcccacgcgtttcaggacggtgcgggca
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