Deinococcus geothermalis: Dgeo_0157
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Entry
Dgeo_0157 CDS
T00353
Name
(GenBank) exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dge
Deinococcus geothermalis
Pathway
dge03030
DNA replication
dge03430
Mismatch repair
dge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dgeo_0157
03430 Mismatch repair
Dgeo_0157
03440 Homologous recombination
Dgeo_0157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dge03032
]
Dgeo_0157
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_0157
Enzymes [BR:
dge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dgeo_0157
DNA replication proteins [BR:
dge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dgeo_0157
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dgeo_0157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Bestrophin-like
Motif
Other DBs
NCBI-ProteinID:
ABF44460
UniProt:
Q1J224
LinkDB
All DBs
Position
complement(146843..147409)
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AA seq
188 aa
AA seq
DB search
MSALPHLAALTQPIIFVDTETGGRDPARHPLLTVGLVTLTPQGEVTRPLHLRVRHEHYEV
EEEAMAVNGIDLATHHATAQAPEEVAEAVRAYARAVGRVMLGGHNLAYDLGFLRWLLPDL
KSIFRRGRVDTKLTAQFLLHAGILPRKVGTPLDQLAKYFGLAYQAHDALEDARVTAWVYA
ELLRLTAR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctcccccacctggccgccttgacccagccgatcatctttgtggacaccgag
acaggcggacgtgaccccgcgcggcatcccctgctgacggtcgggctggtgacgctgacg
ccacagggcgaggtcacgcgcccgctgcacctgcgcgtgcggcacgaacactacgaggtc
gaagaggaggcgatggccgtcaatggcatcgatctggcaacgcaccatgccacagcccag
gcccccgaagaggtggcggaagcggtgcgggcctacgcgcgggcagtggggcgggtgatg
ctgggcgggcacaatctggcctatgacctgggcttcctgcgctggctcctaccggaccta
aagagtatcttccggcgggggcgggtggacaccaagctcacggcgcagtttctgcttcac
gcggggatcttgccacgcaaggtggggacgccgctcgatcagctcgccaagtacttcggg
ctggcgtaccaggcccacgacgcgctggaggatgcgcgggtgaccgcgtgggtgtatgcg
gagcttttgcggctaacggcgcggtga
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