KEGG   Deinococcus geothermalis: Dgeo_0237
Entry
Dgeo_0237         CDS       T00353                                 
Name
(GenBank) CRISPR-associated protein, Csd1 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
dge  Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:dge00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dge02048]
    Dgeo_0237
Prokaryotic defense system [BR:dge02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    Dgeo_0237
SSDB
Motif
Pfam: Cas_Csd1 HSP15_C
Other DBs
NCBI-ProteinID: ABF44540
UniProt: Q1J1U4
LinkDB
Position
complement(221890..223875)
AA seq 661 aa
MLAALIRQAQQAGLSPEPGFAPKELHWLAQLHSGKFTGVLPLREGKKGRQVARCPELSQP
EMMALPKALGQTQAAHFLADSCGVIALLPERAGQEVDTKTQAKHGAYAALLERAAQDLPQ
LLPVLEVLRDPAELAELRAELAQRGAKATDRLSFAVDGLDLLESELWHDWWRRFRRQVFG
QPTTTGTMLDLSSGEVVTPAKTHPKLNKLGVGAMPTGASLIGYDKEAFSSYGLQAGENGA
VSEENAAAYRAALEHLLAQAPVLGQMKVAVWFDHRQAEGQALIDAIENPATLTQASETFS
WDDWDDSASVAVVQTPEQQAAVAHTRAQQLLSALRRGETPPTLTAQYFALAISGASGRAM
VRDWHTGSLEHLAEAVATWFEDLAITNLSGKRAKRPRFFSLLMNIQRPKPQSTSMDDYLK
PIRNLQLPLWRAALDPNAPIPFSAVAKLMEAHKAQVMTGQFSEALSRDGDGEDKGRIYTR
MALLKAYHNRKARRQLARGQGGFLMSSSVDPHHPSPAYHCGRLMYLLANVQDAQGSDVNA
GVVQRYYGAASSTPALVLGRLTRLSQHHLAKIAREKPGLALTLERDIAAVWSALGHDLPK
TLSLEEQSLFALGYYQQLADSVARRQDLAAQRKAATAQADPHPETSPLAETTQTEQTAQG
E
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgctcgccgccctgattcgccaggcccagcaggcgggcctcagccccgagccaggcttt
gcgcccaaagagctgcactggcttgcgcagctgcacagcggaaagttcacgggcgtcttg
ccgcttcgtgagggcaaaaaaggccgccaggttgcgcgctgccccgagctgagccaaccg
gaaatgatggccctgcccaaagccctgggtcaaacccaggccgcccactttctggcggat
tcctgcggtgtgatcgccctgctgcccgaacgtgcgggacaggaggtggacaccaagacc
caggccaagcacggagcctacgccgccctcctggaacgcgccgcccaagacctgccgcag
ctcctccccgtgctcgaagtgctgcgtgaccccgccgagctggccgagctgcgcgccgag
ctggcgcagcggggcgccaaagccaccgatcgcctgagctttgcggtcgacggcctagat
ctgctggagagcgagctttggcacgactggtggcgccgcttccggcgtcaggtcttcgga
cagcccaccacaacaggcaccatgctggacctcagcagcggcgaagtggtgacgcccgcc
aaaacccaccccaagctcaacaaactgggcgtgggggcgatgcccaccggcgcttcgctc
atcggctatgacaaggaagcgttcagttcctacgggctgcaagcgggcgaaaatggcgcg
gtctccgaggaaaatgccgctgcctaccgtgccgcgctggagcatctgctcgcccaggct
ccggtgctgggccagatgaaagtcgccgtctggtttgatcaccgtcaggcggaggggcaa
gcgctcattgacgcgattgagaaccccgccaccctcacgcaggcgtccgaaaccttcagt
tgggacgactgggacgacagcgcgtccgtcgcggtggtgcagacgcccgagcaacaagcg
gctgtggcccacacgcgcgctcagcagctgctcagcgccctgcgccgcggcgagacgccg
cccacgctcaccgctcagtacttcgcccttgccatcagcggtgcaagtggccgagcgatg
gtgcgcgactggcacaccggcagcctggaacacctcgccgaagccgtggccacctggttt
gaagacctcgccatcaccaacctgagcgggaagcgggccaagcgtccccggttctttagc
ctgctgatgaatatccagcggcccaagccgcagtcgacatctatggacgactacctcaag
cccattcgcaaccttcagcttccgttgtggcgagccgcgctcgacccgaatgcacccatt
cctttttctgcggtcgccaagttgatggaggcccacaaagcccaggtgatgaccggccaa
ttcagcgaggccctgagccgtgatggggacggcgaggacaaaggccgtatctacacgcgc
atggcgctcttgaaggcctatcacaaccgcaaggcccgccggcaactcgcccgcggacaa
ggaggttttttgatgtccagttcggttgatccccaccaccccagccccgcctaccactgc
ggacggctgatgtacctgctcgccaacgtgcaagacgcccagggaagcgacgtcaacgct
ggcgtcgtacagcgctactacggcgcggccagcagcacgccagccctggtactgggccgc
ctgacccgcctcagccagcaccacctggccaagatcgcgcgcgagaagcccggcctggct
ttgacgctcgaacgggacatcgccgccgtgtggtccgcgcttggccacgacctccccaaa
acactctcgctcgaggagcaaagcctctttgccctgggctactaccagcaactggcagac
agcgtggctcgccggcaggatctggccgctcagcgcaaggccgccacggcacaagctgac
ccccatcctgaaacttcccctctcgccgagaccacccagaccgaacagaccgcacaagga
gaataa

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