Deinococcus geothermalis: Dgeo_0239
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Entry
Dgeo_0239 CDS
T00353
Name
(GenBank) CRISPR-associated helicase
Organism
dge
Deinococcus geothermalis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HD
ResIII
AAA_22
HDOD
CoA_binding_2
AAA_25
MIOX
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ABF44542
UniProt:
Q1J1U2
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All DBs
Position
complement(224788..227106)
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AA seq
772 aa
AA seq
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MPFLLGRTRFWQRPRGVTTYYAHTFPGDATRQRWQRLKDHAAQVAEQARQYAAPFGEGDR
AALAGLLHDLGKYGVLFQRRLCGLERGLDHWSAGACLAKQAYRDAGLALAIAGHHTGLPC
GDAETLRDLTLERLSTQHPLGLRLTEPDPDQTNLKKLVQRLLEDGLTLPRPGVLPLRPGQ
TAADMLDTRMLFSALVDADYLDTEAAMRADDEPPRPAGLPLDAPRLLAALEERLAELACE
ESLPPTTRALRADLMQACRAAGEATGPLWTLTAPTGSGKTLALLLFALTRAVCQPPARPI
RRIVVVLPFLSLLDQTAEEYRRIVAAAGLDPACLLEHHSLAGTHAAHSDSAARQLTENWD
APLILTTSVQLLESLHAHTPGACRKLHRLAQSIILLDEVQTLPAPLAVLTLKTLARLTQE
KYGATVVMATATQPAFDLLSEQVREAGNAGWQPQEMAPPPLRLFERSKRVTPHWHLETPT
PWATVQDWLRQEPHSLCIVNLRQDALTLAQALSDAPGLRHLSTFLCPAHRRAVLEEIRAD
LQAGRPVRLVSTQCVEAGVDLDFPVVFRALAPLDAIAQAAGRCNRHGRRPYGKLHVFLPE
EDRYPTSAYQRAALLTLSLARENGGHLNLADPATFRRFYERLWPYTTTNRAELREAVARQ
DYPTVARLYRLIPQDSVNVVVPYGEGPALIEEARQQGITRAWMRRAQPYTVTVFRRPDGT
LPPHCEPVNLRTRHGAPAQSADTWFVCPHPEAYDAQLLGWQPDGGGAEPFVL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtttctcttgggcaggactcgtttctggcagaggccacgcggcgtgaccacctac
tacgcccacacctttcccggcgacgccacccggcagcgctggcagcgcctcaaagaccat
gcggctcaggtggccgagcaagcgcggcagtacgccgctccttttggcgaaggcgaccgg
gccgcacttgccggacttctgcatgacctgggcaaatacggcgtcctgtttcaacgccgc
ctctgcggactggaacggggcttggaccactggtccgcgggcgcttgcctggccaaacag
gcttaccgagatgcagggctggcgctggctatcgccgggcatcacaccggacttccctgc
ggagatgccgaaacgctgcgcgacctgaccctcgaacgcctcagcacccagcatcccctg
gggctgcgcctcaccgagccagaccccgaccagaccaacctcaagaaactggtccagcgt
ctgctggaggatggtctcacgttgccccggccaggtgtcctgccgctccgaccgggccaa
accgctgccgacatgctggacacccgcatgctgttttcggcgctggtggatgccgactat
ctggacaccgaggcggccatgcgcgcagatgacgaacctccacgtcccgcagggctgccg
ctggacgctccccgtctgcttgccgccctagaagagcggctggcagaactggcctgcgag
gaaagcctgccacccactacccgcgccctgcgcgcagatctgatgcaggcttgccgcgcg
gcaggtgaggccacaggcccgctgtggaccctcacagcgcccacaggcagcggcaaaacg
ctcgccctgctgctgtttgccctcacgcgggccgtttgccagcccccagcgcggcccatt
cgccgcatcgtggtggtgcttccctttctgagcctgctcgaccagaccgccgaggagtat
cgccgcattgtggcggctgccggacttgatcctgcctgtctcttggaacatcacagcctc
gcgggcacccacgcggcccactcagactccgccgcgcggcagctcaccgagaactgggac
gcgcccttgatcctgaccaccagcgttcagctcctggaaagcctgcatgcccacaccccc
ggggcgtgccgcaaactgcaccgcctggctcagagcatcatcctgctcgatgaagtgcag
acgctcccggcccccctggccgtcctgaccctcaagaccctcgcgcgcctcacccaagaa
aagtacggagccacggtcgtgatggccacggccacccaacccgcctttgacctgctgagc
gagcaggtccgcgaagctggcaatgccggctggcagccccaggagatggcaccgccccca
ctgcggctgtttgagcgttccaagcgggtcacaccccattggcacctggagacgccgacg
ccctgggcgacggtccaagactggctgcgtcaggaaccgcacagcctgtgtatcgtcaac
ctgcgccaagacgccctgaccctcgcccaagccctctcagacgccccagggctgcgccac
ctctcaaccttcctgtgcccagcccaccgccgcgccgtactggaggagattcgcgcggac
ctccaggcaggacgaccggttcgcctggtctccacccaatgcgttgaggcaggagttgat
ctcgattttccggtggtatttcgcgctctggcgccccttgacgccatcgcacaggcggcg
gggcgctgtaatcggcacggacggcgtccgtacggcaagctgcacgtctttctgcccgag
gaagaccgctatccgacaagcgcctaccagcgggccgccctgctcaccctcagcctggct
cgcgagaacggcggtcacctgaacctcgctgatcccgccacgtttcgccgcttctatgaa
cggctgtggccctacaccaccaccaaccgggcagagctgcgtgaggctgtcgcgcggcaa
gactaccctacggtcgcccggctctaccgcctgattccccaggacagcgtgaatgtggtg
gtgccctatggcgagggaccggccctcatcgaggaagcgcggcaacagggcatcacccgc
gcgtggatgcgccgggcgcaaccctacaccgtcacggtctttcgccgccccgacgggacg
ctgccgccccactgcgaacccgtcaacctgcgaacccggcacggcgcacctgcccaatct
gccgacacgtggtttgtctgcccccaccccgaagcctatgacgcccagcttttgggctgg
caacccgacggcggcggcgcggaaccttttgtgctctag
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