Deinococcus geothermalis: Dgeo_0546
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Entry
Dgeo_0546 CDS
T00353
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dge
Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dge03032
]
Dgeo_0546
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_0546
Enzymes [BR:
dge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dgeo_0546
DNA replication proteins [BR:
dge03032
]
Prokaryotic type
DNA Topoisomerases
Dgeo_0546
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dgeo_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
ABF44848
UniProt:
Q1J0Y6
LinkDB
All DBs
Position
complement(578107..580242)
Genome browser
AA seq
711 aa
AA seq
DB search
MSTCYYAHNVIKLTHFSLSCILRKLRRRTQRPFFSSAVSEIVQDHPHWGRRRRTMTQALP
QDHYTADSISILKGLEAVRKRPGMYVQGGTGIDGYHQLLTEIIDNAIDEGLAGFATEVHV
IMHADGSATVTDNGRGIPVDIMKSEGRPAIEVIFTELHAGGKFGGGAYKVSGGLHGVGSS
VVNALSTYLDVTVNKDGNLHHIRFERGTVTTPLEVLGPTPQDVRWATKVTFHPDPTVFSE
FENLFNYDRIRGRLRELAYLTGLKIVVRDERVGLHGGEIREETFHEQGGIANFARALVTD
DSKLLYDQPIVMRGTHSDVEVEVAFIHANTYASDNILTYANMIRTRDGGTPLTGFKTAYT
RILNKYAKDKNLIKSGNPVPTGDDLLEGIYCVVSVKLPEPQFESQAKVKLLNSEAQTAVN
AIVGEKFTEFLEENPKIGRTIVEKAAEAARAREAARKARDIVRRSNPLENDDLPGKLADC
TSQDPAESELFIVEGDSAGGSAKMGRERRYQAILPLRGKILNVEKSDLNKILKNAEIRAM
IGAIGAGVEGTGDRMHFDLSNLRYHKIIIMTDADMDGGHITTLLLTFFYRYMRPIIEAGY
LYIAQPPLYRIMVGREKKGTYLYTEEELKEHVARATKEGKKYEIQRFKGLGEMNAEQLWD
TTMNPETRALKRVQVEDLIIANEVFEDLMGNEVGPRKRFIQENARFAEISI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacctgttattacgctcataacgtaatcaagttgacccatttcagtctaagttgt
atactaagaaaacttcggaggcgcacccagcgcccttttttcagcagcgcagtctccgaa
atcgtgcaagatcacccccattggggacgacgcaggaggaccatgacgcaagctctcccc
caagaccactacacggctgattccatctcgattctcaaggggctggaagcggtgcgcaaa
cgccccggcatgtacgtgcagggcggcaccggaatcgacggctaccaccagctcctgacc
gagattattgacaacgccatcgacgagggcctggccgggttcgccaccgaggtgcacgtc
atcatgcacgccgacggctcggccaccgtcaccgacaacggacgcggcattcccgtggat
atcatgaagtcggaagggcgcccagccattgaggttatcttcaccgagctgcacgcgggc
ggcaagttcggcggcggtgcctataaggtgtcgggcggcctgcacggggtcggctccagc
gtggtgaacgcgctgtccacctatctcgacgtcaccgtcaacaaggacggcaacctgcac
cacatccgcttcgagagggggaccgtgaccacaccgctcgaagtcctggggccaacgccg
caggacgtgcggtgggccaccaaggtcaccttccaccccgaccctaccgtcttcagcgag
ttcgagaacctcttcaactacgaccgcattcgcggccgcttgcgcgagctggcctacctg
actggcctcaaaatcgtggtccgtgacgagcgcgtcgggttgcacggcggcgaaattcgc
gaggagacctttcatgagcagggcggcatcgccaacttcgcccgcgcgctcgtcaccgat
gactccaagctgctctatgaccagcccatcgtgatgcgcggcacccacagtgacgtggag
gtcgaggtcgccttcattcatgccaacacctacgccagcgacaacatcctcacgtacgcg
aacatgattcgcacgcgcgacggcggcacgcccctcaccggcttcaaaaccgcctatacc
cgcatcctgaataagtacgccaaagacaaaaatctgatcaagtcgggcaatccggtcccc
accggcgatgacctgctggaaggcatctactgcgtggtgtcggtcaagctgcccgagccg
cagttcgagtcgcaggccaaggtcaagctgctcaacagcgaggcacagaccgccgtgaac
gccattgtgggcgagaagttcacggagtttctggaggaaaatcccaagatcggccggacc
attgtggaaaaggcagctgaggcggcccgcgcccgcgaggcggcccgcaaggcccgcgac
atcgtgcgccgctccaatccgctggagaacgacgacctgcccggcaagctggccgactgc
accagccaggacccagcggaatccgaactcttcatcgtggaaggggactcggcgggcggc
agcgccaagatgggccgggagcgccgctatcaggccattcttccgctgcgcggcaagatt
ctgaatgtcgaaaagtccgacctgaacaagattctgaaaaacgccgagattcgcgcgatg
atcggggccatcggggcgggcgtcgagggcaccggggaccgaatgcacttcgacctttcc
aacctgcgctaccacaagatcatcatcatgacggacgcggacatggacggcggccacatc
accacgctgctgctgacgttcttctaccgctatatgcgccccatcatcgaagccgggtat
ctctatatcgcgcagccaccgctctaccgcatcatggtgggccgcgagaaaaaaggcacc
tacctctacaccgaagaggaactcaaggaacacgtcgcgcgcgccacaaaggaaggcaag
aagtacgagatccagcgcttcaaggggctgggcgagatgaacgccgagcagctctgggac
accaccatgaaccccgagacacgcgcgctgaagcgcgtgcaggtagaagacctgatcatc
gccaacgaggtcttcgaagacctgatggggaatgaagtggggccgcgcaagcggtttatt
caggaaaatgcgcgttttgcggaaatcagcatctga
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