Deinococcus geothermalis: Dgeo_0554
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Entry
Dgeo_0554 CDS
T00353
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dge
Deinococcus geothermalis
Pathway
dge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dgeo_0554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dge02000
]
Dgeo_0554
Transporters [BR:
dge02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dgeo_0554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
CotJA
Motif
Other DBs
NCBI-ProteinID:
ABF44856
UniProt:
Q1J0X8
LinkDB
All DBs
Position
589456..591201
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AA seq
581 aa
AA seq
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MKFGTQTRALLLATLSLTLAACNNRNANNGAKSTLVVQESSDIPTLDPGTSYDTGSSQIV
ENLYETLVTYKGNSLRELEPLLATNWEVGNGGREYRFTLREGVKFHSGNPFKCADAEYTF
RRNLVTNTSESGNWFLFESLLGTSSNANDDKSITWDKIVNAVKCDGETLVFTLPKADPAF
LSKLAYPGQSIVDSEHAKKIGEWDGTEATWKAAVGKSLMDSPLSRDPSGTGAYRFVSKDA
NTFRAEAFDGYWGKKPAIKNVILQKVPELAARQQAFLRGDADLIEAGTRVNIEEQLKGKP
GVAILDNLPDISAFGIAMNENIQAKDRLGSGKLDGQGIPANFFSDPDVRRGFVASFDVPT
YIKQVQSGMGEPRNFLLPETFPGYNKDLAAPQFDLEAAKAAFQRAWGGQVWKNGFTVNAT
YRAGSVGAQTAMEILKKNIESLNPKFRVNIQPKQWSEILDNADKGRESLVTTGWAPDYAD
PDNFVYTFYSSQGFYHPRVGFTDSQIDTWINEARNTTDTQQRDQLYTQIAERAKDQAYYI
LMPSNPGILAYRDNIQGISESTFNPMVAFRAGTLWKNLSKS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttggaacgcagacccgcgccctgctgctcgccaccctgtccttgaccttggcc
gcctgtaacaaccgcaacgcgaacaacggtgccaagagtactctggtggtgcaggaaagc
tcggatattcctaccctcgaccccggcacctcctacgacaccggctcaagtcaaattgtc
gaaaacctctacgagacgttggtgacctacaagggcaacagtctcagagaactggagccg
ctgctggccaccaactgggaggtgggcaatggcgggcgcgagtaccgcttcacgctgcgt
gaaggcgtgaagttccactccggcaacccgttcaagtgcgccgacgccgaatacaccttc
cgccgcaatctggtcaccaacaccagcgagagtggcaactggttccttttcgagagtctg
ctgggcacgagcagcaacgccaacgacgacaagtccatcacctgggacaaaatcgtgaac
gccgtgaagtgtgacggcgagacgctggtcttcacgctgcccaaagccgatcccgcgttc
ctctctaaattggcctatcccggccagagcattgtggacagtgagcatgccaagaagatc
ggcgagtgggacggcaccgaggccacctggaaggcggctgtgggcaagagcctgatggac
agcccgctctcgcgtgatcccagcggcaccggcgcgtaccgctttgtcagcaaggacgcc
aacaccttccgtgccgaggcttttgatggctactggggcaaaaagcccgccatcaagaat
gtgattcttcagaaggtgcccgagctggccgcccgccagcaggccttcttgcgcggtgac
gccgatctgattgaggcgggtacccgcgtcaacatcgaggagcagctcaagggcaagccc
ggcgtagcgatcctggataacctgcccgacatcagcgcctttggcatcgcgatgaacgag
aacatccaggccaaggatcgcctgggcagcggcaagctggacggccaggggattccggcc
aacttcttcagtgatcccgatgtgcgccggggttttgtcgcgtccttcgatgtgccgacc
tacatcaagcaggtgcaaagcgggatgggtgagccgcgcaacttcctgctgccggagacc
ttccccggctacaataaggacctagccgcgccgcagtttgacctcgaagcggccaaagcc
gctttccagcgggcctggggcgggcaggtctggaaaaacggctttacggtgaatgccacc
taccgcgcggggagcgtgggcgcacagaccgcgatggaaattctgaagaagaacatcgag
tccctcaatcccaagttccgagtcaacatccaacccaagcagtggagcgagattctggac
aacgccgataagggccgtgaatcgctggtgacgaccggctgggcgcccgactacgccgac
cccgacaacttcgtctataccttctacagcagccagggcttctatcacccccgtgtgggc
ttcacggattcccagatcgacacctggatcaatgaggcgcgcaacaccaccgacacccag
caacgcgaccagctttacacccagattgccgaacgcgccaaggatcaggcctactacatc
ctgatgcccagcaaccccggcatcttggcctaccgcgacaacatccagggcatcagcgag
agcaccttcaacccgatggtggccttccgtgccggtacgctctggaagaacctcagcaag
tcctga
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